RNA–Protein interactions for RNA: ENST00000425707.7

RARA-206, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-206ENST00000425707 CFC1P0CG37 223 aa12.98□□□□□ -0.33
RARA-206ENST00000425707 CACNA1BQ00975 2339 aa12.98□□□□□ -0.33
RARA-206ENST00000425707 ODF3Q96PU9 254 aa12.97□□□□□ -0.33
RARA-206ENST00000425707 PRO1854Q9UHT4 67 aa12.97□□□□□ -0.33
RARA-206ENST00000425707 EPG5Q9HCE0 2579 aa12.97□□□□□ -0.33
RARA-206ENST00000425707 KLRB1Q12918 225 aa12.97□□□□□ -0.33
RARA-206ENST00000425707 ITPR1Q14643 2758 aa12.97□□□□□ -0.33
RARA-206ENST00000425707 RHOHQ15669 191 aa12.97□□□□□ -0.33
RARA-206ENST00000425707 FAM159AQ6UWV7 190 aa12.97□□□□□ -0.33
RARA-206ENST00000425707 MUC4Q99102 2169 aa12.97□□□□□ -0.33
RARA-206ENST00000425707 A8MWV9 139 aa12.97□□□□□ -0.33
RARA-206ENST00000425707 SPRY2O43597 315 aa12.97□□□□□ -0.33
RARA-206ENST00000425707 TCL1BO95988 128 aa12.97□□□□□ -0.33
RARA-206ENST00000425707 NSUN5P1Q3KNT7 163 aa12.97□□□□□ -0.33
RARA-206ENST00000425707 CARD19Q96LW7 228 aa12.96□□□□□ -0.33
RARA-206ENST00000425707 J3QQQ9 107 aa12.96□□□□□ -0.34
RARA-206ENST00000425707 TRBV12-3P01733 135 aa12.96□□□□□ -0.34
RARA-206ENST00000425707 K7EMT4 169 aa12.95□□□□□ -0.34
RARA-206ENST00000425707 IGHG2P01859 326 aa12.95□□□□□ -0.34
RARA-206ENST00000425707 Q6ZUT4 128 aa12.95□□□□□ -0.34
RARA-206ENST00000425707 TMEM219Q86XT9 240 aa12.95□□□□□ -0.34
RARA-206ENST00000425707 LINC01600Q96MT4 127 aa12.95□□□□□ -0.34
RARA-206ENST00000425707 SDHAF1A6NFY7 115 aa12.95□□□□□ -0.34
RARA-206ENST00000425707 TMEM262E9PQX1 116 aa12.95□□□□□ -0.34
RARA-206ENST00000425707 LEPROTO15243 131 aa12.95□□□□□ -0.34
RARA-206ENST00000425707 ID1P41134 155 aa12.95□□□□□ -0.34
RARA-206ENST00000425707 TSPEAR-AS2P59090 65 aa12.95□□□□□ -0.34
RARA-206ENST00000425707 ZNRF2Q8NHG8 242 aa12.95□□□□□ -0.34
RARA-206ENST00000425707 A0A0J9YX75 114 aa12.94□□□□□ -0.34
RARA-206ENST00000425707 A0A1W2PPR1 153 aa12.94□□□□□ -0.34
RARA-206ENST00000425707 SPINK8P0C7L1 97 aa12.94□□□□□ -0.34
RARA-206ENST00000425707 RHPN1-AS1Q9BWJ2 59 aa12.94□□□□□ -0.34
RARA-206ENST00000425707 LRBAP50851 2863 aa12.94□□□□□ -0.34
RARA-206ENST00000425707 C9orf85Q96MD7 179 aa12.94□□□□□ -0.34
RARA-206ENST00000425707 A0A0B4J2C4 111 aa12.94□□□□□ -0.34
RARA-206ENST00000425707 F6UB75 175 aa12.94□□□□□ -0.34
RARA-206ENST00000425707 LGALS3P17931 250 aaKnown RBP12.94□□□□□ -0.34
RARA-206ENST00000425707 Q6ZS46 218 aa12.94□□□□□ -0.34
RARA-206ENST00000425707 BPESC1Q9GZL8 116 aa12.94□□□□□ -0.34
RARA-206ENST00000425707 DAZ1Q9NQZ3 744 aaKnown RBP12.94□□□□□ -0.34
RARA-206ENST00000425707 HRNRQ86YZ3 2850 aaPredicted RBP12.93□□□□□ -0.34
RARA-206ENST00000425707 ZNF688P0C7X2 276 aa12.93□□□□□ -0.34
RARA-206ENST00000425707 TMEM170BQ5T4T1 132 aa12.93□□□□□ -0.34
RARA-206ENST00000425707 P0DMU3 169 aa12.93□□□□□ -0.34
RARA-206ENST00000425707 FAM231AP0DMU4 169 aa12.93□□□□□ -0.34
RARA-206ENST00000425707 FAM231CP0DMU5 169 aa12.93□□□□□ -0.34
RARA-206ENST00000425707 RPL39P62891 51 aaKnown RBP12.93□□□□□ -0.34
RARA-206ENST00000425707 TMEM223A0PJW6 202 aa12.92□□□□□ -0.34
RARA-206ENST00000425707 FHL3Q13643 280 aa12.92□□□□□ -0.34
RARA-206ENST00000425707 UCNP55089 124 aa12.92□□□□□ -0.34
RARA-206ENST00000425707 DEFB1P60022 68 aa12.92□□□□□ -0.34
RARA-206ENST00000425707 RPL11P62913 178 aaKnown RBP12.92□□□□□ -0.34
RARA-206ENST00000425707 MDFICQ9P1T7 246 aa12.92□□□□□ -0.34
RARA-206ENST00000425707 GEMIN7Q9H840 131 aaKnown RBP12.91□□□□□ -0.34
RARA-206ENST00000425707 LINC00527Q9UJ94 153 aa12.91□□□□□ -0.34
RARA-206ENST00000425707 ZNF580Q9UK33 172 aa12.91□□□□□ -0.34
RARA-206ENST00000425707 IGLV1-40P01703 118 aa12.91□□□□□ -0.34
RARA-206ENST00000425707 XGP55808 180 aa12.9□□□□□ -0.34
RARA-206ENST00000425707 MT-ATP8P03928 68 aa12.9□□□□□ -0.34
RARA-206ENST00000425707 TRPT1Q86TN4 253 aaKnown RBP12.9□□□□□ -0.34
RARA-206ENST00000425707 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.89□□□□□ -0.35
RARA-206ENST00000425707 IGHV3-16A0A0C4DH30 117 aa12.89□□□□□ -0.35
RARA-206ENST00000425707 M0QY20 66 aa12.89□□□□□ -0.35
RARA-206ENST00000425707 IGHV3-33P01772 117 aa12.89□□□□□ -0.35
RARA-206ENST00000425707 EMP1P54849 157 aa12.89□□□□□ -0.35
RARA-206ENST00000425707 DCANP1Q8TF63 244 aa12.89□□□□□ -0.35
RARA-206ENST00000425707 TMEM263Q8WUH6 116 aaKnown RBP12.89□□□□□ -0.35
RARA-206ENST00000425707 PTH2Q96A98 100 aa12.89□□□□□ -0.35
RARA-206ENST00000425707 F5H697 171 aa12.89□□□□□ -0.35
RARA-206ENST00000425707 UBTD1Q9HAC8 227 aa12.89□□□□□ -0.35
RARA-206ENST00000425707 A6NDX4 124 aa12.88□□□□□ -0.35
RARA-206ENST00000425707 ANKRD29Q8N6D5 301 aa12.88□□□□□ -0.35
RARA-206ENST00000425707 JPT2Q9H910 190 aa12.88□□□□□ -0.35
RARA-206ENST00000425707 SCGB1C2P0DMR2 95 aa12.88□□□□□ -0.35
RARA-206ENST00000425707 EDA2RQ9HAV5 297 aa12.88□□□□□ -0.35
RARA-206ENST00000425707 A0A087WWL8 130 aa12.87□□□□□ -0.35
RARA-206ENST00000425707 LY6DQ14210 128 aa12.87□□□□□ -0.35
RARA-206ENST00000425707 SFTA2Q6UW10 78 aa12.87□□□□□ -0.35
RARA-206ENST00000425707 RNF152Q8N8N0 203 aa12.87□□□□□ -0.35
RARA-206ENST00000425707 C20orf203Q8NBC4 194 aa12.87□□□□□ -0.35
RARA-206ENST00000425707 ZNF256Q9Y2P7 627 aaPredicted RBP12.87□□□□□ -0.35
RARA-206ENST00000425707 A4D1N5 150 aa12.87□□□□□ -0.35
RARA-206ENST00000425707 SLC25A20O43772 301 aa12.87□□□□□ -0.35
RARA-206ENST00000425707 ERG28Q9UKR5 140 aa12.87□□□□□ -0.35
RARA-206ENST00000425707 RHODO00212 210 aa12.86□□□□□ -0.35
RARA-206ENST00000425707 PF4V1P10720 104 aa12.86□□□□□ -0.35
RARA-206ENST00000425707 CFHR3Q02985 330 aa12.86□□□□□ -0.35
RARA-206ENST00000425707 USP24Q9UPU5 2620 aa12.86□□□□□ -0.35
RARA-206ENST00000425707 M0R2P5 195 aa12.86□□□□□ -0.35
RARA-206ENST00000425707 IGHV3-11P01762 117 aa12.86□□□□□ -0.35
RARA-206ENST00000425707 ZNF22P17026 224 aaPredicted RBP12.86□□□□□ -0.35
RARA-206ENST00000425707 PYGO1Q9Y3Y4 419 aa12.85□□□□□ -0.35
RARA-206ENST00000425707 TRAV12-3A0A0B4J271 114 aa12.85□□□□□ -0.35
RARA-206ENST00000425707 I3L3M4 83 aa12.85□□□□□ -0.35
RARA-206ENST00000425707 TRAV26-1A0A087WT03 109 aa12.84□□□□□ -0.35
RARA-206ENST00000425707 COL12A1Q99715 3063 aa12.84□□□□□ -0.35
RARA-206ENST00000425707 EIF4EBP3O60516 100 aaPredicted RBP12.83□□□□□ -0.35
RARA-206ENST00000425707 ATXN8Q156A1 80 aa12.83□□□□□ -0.36
RARA-206ENST00000425707 ZNF56Q15929 161 aa12.83□□□□□ -0.36
RARA-206ENST00000425707 TRBV30A0A0K0K1B3 111 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms