RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 XGP55808 180 aa8.81□□□□□ -1
VRK3-203ENST00000424804 RHOHQ15669 191 aa8.81□□□□□ -1
VRK3-203ENST00000424804 DAZAP1Q96EP5 407 aaKnown RBP8.81□□□□□ -1
VRK3-203ENST00000424804 MLST8Q9BVC4 326 aa8.81□□□□□ -1
VRK3-203ENST00000424804 PARLQ9H300 379 aa8.81□□□□□ -1
VRK3-203ENST00000424804 A0A087WWL8 130 aa8.8□□□□□ -1
VRK3-203ENST00000424804 MUC21A0A0G2JKD1 596 aa8.8□□□□□ -1
VRK3-203ENST00000424804 MUC21A0A140T8X8 626 aa8.8□□□□□ -1
VRK3-203ENST00000424804 CIDEAO60543 219 aa8.8□□□□□ -1
VRK3-203ENST00000424804 ZFP82Q8N141 532 aa8.8□□□□□ -1
VRK3-203ENST00000424804 PTH2Q96A98 100 aa8.8□□□□□ -1
VRK3-203ENST00000424804 TPPP3Q9BW30 176 aa8.8□□□□□ -1
VRK3-203ENST00000424804 SAMD10Q9BYL1 202 aa8.8□□□□□ -1
VRK3-203ENST00000424804 MYCBP2O75592 4640 aa8.8□□□□□ -1
VRK3-203ENST00000424804 TRBV6-4A0A1B0GX49 114 aa8.79□□□□□ -1
VRK3-203ENST00000424804 GAGE12JA6NER3 117 aa8.79□□□□□ -1
VRK3-203ENST00000424804 GAGE1Q13065 139 aa8.79□□□□□ -1
VRK3-203ENST00000424804 GAGE4Q13068 117 aa8.79□□□□□ -1
VRK3-203ENST00000424804 GAGE5Q13069 117 aa8.79□□□□□ -1
VRK3-203ENST00000424804 GAGE13Q4V321 117 aa8.79□□□□□ -1
VRK3-203ENST00000424804 DNLZQ5SXM8 178 aa8.79□□□□□ -1
VRK3-203ENST00000424804 RBFOX3A6NFN3 312 aa8.78□□□□□ -1
VRK3-203ENST00000424804 GZMBP10144 247 aa8.78□□□□□ -1
VRK3-203ENST00000424804 TAGLN2P37802 199 aaKnown RBP8.78□□□□□ -1
VRK3-203ENST00000424804 SPANXN1Q5VSR9 72 aa8.78□□□□□ -1
VRK3-203ENST00000424804 Q6ZSN1 163 aa8.78□□□□□ -1
VRK3-203ENST00000424804 WFDC10BQ8IUB3 73 aa8.78□□□□□ -1
VRK3-203ENST00000424804 OR10AG1Q8NH19 301 aa8.78□□□□□ -1
VRK3-203ENST00000424804 PGPEP1Q9NXJ5 209 aa8.78□□□□□ -1
VRK3-203ENST00000424804 RHODO00212 210 aa8.77□□□□□ -1.01
VRK3-203ENST00000424804 IGLV2-8P01709 118 aa8.77□□□□□ -1.01
VRK3-203ENST00000424804 OR10J3Q5JRS4 329 aa8.77□□□□□ -1.01
VRK3-203ENST00000424804 TOR2AQ5JU69 321 aa8.77□□□□□ -1.01
VRK3-203ENST00000424804 ZFP2Q6ZN57 461 aa8.77□□□□□ -1.01
VRK3-203ENST00000424804 SH2D6Q7Z4S9 175 aa8.77□□□□□ -1.01
VRK3-203ENST00000424804 C14orf178Q8N769 122 aaPredicted RBP8.77□□□□□ -1.01
VRK3-203ENST00000424804 OR2D3Q8NGH3 330 aa8.77□□□□□ -1.01
VRK3-203ENST00000424804 SFRP2Q96HF1 295 aa8.77□□□□□ -1.01
VRK3-203ENST00000424804 EIF5A2Q9GZV4 153 aaKnown RBP8.77□□□□□ -1.01
VRK3-203ENST00000424804 LY96Q9Y6Y9 160 aa8.77□□□□□ -1.01
VRK3-203ENST00000424804 TRBV20OR9-2A0A075B6H5 130 aa8.76□□□□□ -1.01
VRK3-203ENST00000424804 P01737 135 aa8.76□□□□□ -1.01
VRK3-203ENST00000424804 DNAH10OSP0CZ25 163 aa8.76□□□□□ -1.01
VRK3-203ENST00000424804 KRTAP10-1P60331 282 aa8.76□□□□□ -1.01
VRK3-203ENST00000424804 ZNF56Q15929 161 aa8.76□□□□□ -1.01
VRK3-203ENST00000424804 PIK3CD-AS1Q5SR53 167 aa8.76□□□□□ -1.01
VRK3-203ENST00000424804 ATP6V0E2Q8NHE4 81 aa8.76□□□□□ -1.01
VRK3-203ENST00000424804 A0A087WTM6 91 aa8.75□□□□□ -1.01
VRK3-203ENST00000424804 BIN3Q9NQY0 253 aa8.75□□□□□ -1.01
VRK3-203ENST00000424804 TRAV9-2A0A087WT02 112 aa8.74□□□□□ -1.01
VRK3-203ENST00000424804 TRAV8-6A0A0B4J262 113 aa8.74□□□□□ -1.01
VRK3-203ENST00000424804 F5H697 171 aa8.74□□□□□ -1.01
VRK3-203ENST00000424804 CXCL1P09341 107 aa8.74□□□□□ -1.01
VRK3-203ENST00000424804 EVI2AP22794 236 aa8.74□□□□□ -1.01
VRK3-203ENST00000424804 RPS20P60866 119 aaKnown RBP8.74□□□□□ -1.01
VRK3-203ENST00000424804 FER1L6-AS1Q8NA97 138 aa8.74□□□□□ -1.01
VRK3-203ENST00000424804 SMIM12Q96EX1 92 aa8.74□□□□□ -1.01
VRK3-203ENST00000424804 Q9UF83 564 aa8.74□□□□□ -1.01
VRK3-203ENST00000424804 XKRY2A2RUG3 117 aa8.73□□□□□ -1.01
VRK3-203ENST00000424804 C19orf71A6NCJ1 209 aa8.73□□□□□ -1.01
VRK3-203ENST00000424804 SNAI2O43623 268 aa8.73□□□□□ -1.01
VRK3-203ENST00000424804 CRYGDP07320 174 aa8.73□□□□□ -1.01
VRK3-203ENST00000424804 OR5AL1P0C617 328 aa8.73□□□□□ -1.01
VRK3-203ENST00000424804 SMIM17P0DL12 118 aa8.73□□□□□ -1.01
VRK3-203ENST00000424804 UFSP1Q6NVU6 142 aa8.73□□□□□ -1.01
VRK3-203ENST00000424804 OCC1Q8TAD7 63 aa8.73□□□□□ -1.01
VRK3-203ENST00000424804 RNASE7Q9H1E1 156 aaKnown RBP8.73□□□□□ -1.01
VRK3-203ENST00000424804 GTSF1LQ9H1H1 148 aa8.73□□□□□ -1.01
VRK3-203ENST00000424804 SRRM2Q9UQ35 2752 aaKnown RBP8.73□□□□□ -1.01
VRK3-203ENST00000424804 FLG2Q5D862 2391 aaPredicted RBP8.72□□□□□ -1.01
VRK3-203ENST00000424804 DMBT1Q9UGM3 2413 aaPredicted RBP8.72□□□□□ -1.01
VRK3-203ENST00000424804 EPM2AB3EWF7 344 aa8.72□□□□□ -1.01
VRK3-203ENST00000424804 TMEM250H0YL14 139 aa8.72□□□□□ -1.01
VRK3-203ENST00000424804 IGHV3-30P01768 117 aa8.72□□□□□ -1.01
VRK3-203ENST00000424804 IGHV3-33P01772 117 aa8.72□□□□□ -1.01
VRK3-203ENST00000424804 MGPP08493 103 aa8.72□□□□□ -1.01
VRK3-203ENST00000424804 IGHV3-30-3P0DP02 117 aa8.72□□□□□ -1.01
VRK3-203ENST00000424804 IGHV3-30-5P0DP03 117 aa8.72□□□□□ -1.01
VRK3-203ENST00000424804 CDPF1Q6NVV7 123 aa8.72□□□□□ -1.01
VRK3-203ENST00000424804 NUDT10Q8NFP7 164 aa8.72□□□□□ -1.01
VRK3-203ENST00000424804 LYPD6BQ8NI32 183 aa8.72□□□□□ -1.01
VRK3-203ENST00000424804 NUDT11Q96G61 164 aa8.72□□□□□ -1.01
VRK3-203ENST00000424804 IGHV3-38A0A0C4DH36 116 aa8.71□□□□□ -1.02
VRK3-203ENST00000424804 K7EN84 100 aa8.71□□□□□ -1.02
VRK3-203ENST00000424804 ERVFC1-1P60608 527 aa8.71□□□□□ -1.02
VRK3-203ENST00000424804 LELP1Q5T871 98 aa8.71□□□□□ -1.02
VRK3-203ENST00000424804 NFE4Q86UQ8 179 aa8.71□□□□□ -1.02
VRK3-203ENST00000424804 FAM210AQ96ND0 272 aa8.71□□□□□ -1.02
VRK3-203ENST00000424804 AP1S3Q96PC3 154 aa8.71□□□□□ -1.02
VRK3-203ENST00000424804 SSBP4Q9BWG4 385 aaPredicted RBP8.71□□□□□ -1.02
VRK3-203ENST00000424804 MSRB1Q9NZV6 116 aa8.71□□□□□ -1.02
VRK3-203ENST00000424804 LRCOL1A6NCL2 159 aa8.7□□□□□ -1.02
VRK3-203ENST00000424804 TIRAPP58753 221 aa8.7□□□□□ -1.02
VRK3-203ENST00000424804 RPL36AP83881 106 aaKnown RBP8.7□□□□□ -1.02
VRK3-203ENST00000424804 LYZL1Q6UWQ5 148 aa8.7□□□□□ -1.02
VRK3-203ENST00000424804 RPL36ALQ969Q0 106 aaKnown RBP8.7□□□□□ -1.02
VRK3-203ENST00000424804 SMIM7Q9BQ49 75 aa8.7□□□□□ -1.02
VRK3-203ENST00000424804 RPP21Q9H633 154 aaKnown RBP8.7□□□□□ -1.02
VRK3-203ENST00000424804 GATCO43716 136 aaKnown RBP8.69□□□□□ -1.02
VRK3-203ENST00000424804 IGLC6P0CF74 106 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms