RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 IGFBP7Q16270 282 aa2.17□□□□□ -2.06
SF3B1-205ENST00000424674 LCE3AQ5TA76 89 aa2.17□□□□□ -2.06
SF3B1-205ENST00000424674 ZNF818PQ6ZRF7 136 aa2.17□□□□□ -2.06
SF3B1-205ENST00000424674 TIMM21Q9BVV7 248 aa2.17□□□□□ -2.06
SF3B1-205ENST00000424674 PRR34Q9NV39 138 aa2.17□□□□□ -2.06
SF3B1-205ENST00000424674 ATP10BO94823 1461 aa2.17□□□□□ -2.06
SF3B1-205ENST00000424674 CDK12Q9NYV4 1490 aaPredicted RBP2.17□□□□□ -2.06
SF3B1-205ENST00000424674 THOC2Q8NI27 1593 aaKnown RBP2.17□□□□□ -2.06
SF3B1-205ENST00000424674 MGAMO43451 1857 aa2.17□□□□□ -2.06
SF3B1-205ENST00000424674 DOCK9Q9BZ29 2069 aa2.17□□□□□ -2.06
SF3B1-205ENST00000424674 MYO10Q9HD67 2058 aa2.17□□□□□ -2.06
SF3B1-205ENST00000424674 CHD3Q12873 2000 aaKnown RBP2.17□□□□□ -2.06
SF3B1-205ENST00000424674 CCDC88CQ9P219 2028 aa2.17□□□□□ -2.06
SF3B1-205ENST00000424674 COL24A1Q17RW2 1714 aa2.17□□□□□ -2.06
SF3B1-205ENST00000424674 EPRSP07814 1512 aaKnown RBP2.17□□□□□ -2.06
SF3B1-205ENST00000424674 ANK1P16157 1881 aa2.16□□□□□ -2.06
SF3B1-205ENST00000424674 CASZ1Q86V15 1759 aa2.16□□□□□ -2.06
SF3B1-205ENST00000424674 COL1A2P08123 1366 aa2.16□□□□□ -2.06
SF3B1-205ENST00000424674 IGLV4-60A0A075B6I1 120 aa2.16□□□□□ -2.06
SF3B1-205ENST00000424674 TRAV23DV6A0A075B6W5 121 aa2.16□□□□□ -2.06
SF3B1-205ENST00000424674 TRBV10-1A0A0K0K1A3 114 aa2.16□□□□□ -2.06
SF3B1-205ENST00000424674 A0A1W2PNM2 257 aa2.16□□□□□ -2.06
SF3B1-205ENST00000424674 A0A1W2PNU3 283 aaPredicted RBP2.16□□□□□ -2.06
SF3B1-205ENST00000424674 C2orf70A6NJV1 201 aa2.16□□□□□ -2.06
SF3B1-205ENST00000424674 ACYP1P07311 99 aa2.16□□□□□ -2.06
SF3B1-205ENST00000424674 WFDC2Q14508 124 aa2.16□□□□□ -2.06
SF3B1-205ENST00000424674 ELOBQ15370 118 aa2.16□□□□□ -2.06
SF3B1-205ENST00000424674 KRTAP13-3Q3SY46 172 aa2.16□□□□□ -2.06
SF3B1-205ENST00000424674 C1orf137Q5JT78 98 aa2.16□□□□□ -2.06
SF3B1-205ENST00000424674 LYPD5Q6UWN5 251 aa2.16□□□□□ -2.06
SF3B1-205ENST00000424674 HEPN1Q6WQI6 88 aa2.16□□□□□ -2.06
SF3B1-205ENST00000424674 CYP2G1PQ6ZSU1 146 aa2.16□□□□□ -2.06
SF3B1-205ENST00000424674 FAM167A-AS1Q96KT0 104 aa2.16□□□□□ -2.06
SF3B1-205ENST00000424674 LINC01600Q96MT4 127 aa2.16□□□□□ -2.06
SF3B1-205ENST00000424674 AMELYQ99218 206 aa2.16□□□□□ -2.06
SF3B1-205ENST00000424674 KRTAP4-3Q9BYR4 195 aa2.16□□□□□ -2.06
SF3B1-205ENST00000424674 SUPT6HQ7KZ85 1726 aaKnown RBP2.16□□□□□ -2.06
SF3B1-205ENST00000424674 MALRD1Q5VYJ5 2156 aa2.16□□□□□ -2.06
SF3B1-205ENST00000424674 EDC4Q6P2E9 1401 aaKnown RBP2.16□□□□□ -2.06
SF3B1-205ENST00000424674 LRRIQ1Q96JM4 1722 aa2.15□□□□□ -2.07
SF3B1-205ENST00000424674 PEAK1Q9H792 1746 aa2.15□□□□□ -2.07
SF3B1-205ENST00000424674 TNS1Q9HBL0 1735 aaKnown RBP2.15□□□□□ -2.07
SF3B1-205ENST00000424674 TRAV12-3A0A0B4J271 114 aa2.15□□□□□ -2.07
SF3B1-205ENST00000424674 HRES1P13985 223 aa2.15□□□□□ -2.07
SF3B1-205ENST00000424674 PMCHL1Q16048 86 aa2.15□□□□□ -2.07
SF3B1-205ENST00000424674 PYDC2Q56P42 97 aa2.15□□□□□ -2.07
SF3B1-205ENST00000424674 C18orf32Q8TCD1 76 aa2.15□□□□□ -2.07
SF3B1-205ENST00000424674 DMAC1Q96GE9 116 aa2.15□□□□□ -2.07
SF3B1-205ENST00000424674 MANBALQ9NQG1 85 aa2.15□□□□□ -2.07
SF3B1-205ENST00000424674 ORMDL1Q9P0S3 153 aa2.15□□□□□ -2.07
SF3B1-205ENST00000424674 PRO1854Q9UHT4 67 aa2.15□□□□□ -2.07
SF3B1-205ENST00000424674 CPAMD8Q8IZJ3 1885 aa2.15□□□□□ -2.07
SF3B1-205ENST00000424674 ZC3H13Q5T200 1668 aaKnown RBP2.15□□□□□ -2.07
SF3B1-205ENST00000424674 MYH8P13535 1937 aa2.15□□□□□ -2.07
SF3B1-205ENST00000424674 PTPRMP28827 1452 aa2.14□□□□□ -2.07
SF3B1-205ENST00000424674 MLH3Q9UHC1 1453 aa2.14□□□□□ -2.07
SF3B1-205ENST00000424674 MON2Q7Z3U7 1717 aa2.14□□□□□ -2.07
SF3B1-205ENST00000424674 LRP5O75197 1615 aa2.14□□□□□ -2.07
SF3B1-205ENST00000424674 SCN3AQ9NY46 2000 aa2.14□□□□□ -2.07
SF3B1-205ENST00000424674 RGPD4Q7Z3J3 1758 aa2.14□□□□□ -2.07
SF3B1-205ENST00000424674 SLIT3O75094 1523 aa2.14□□□□□ -2.07
SF3B1-205ENST00000424674 TRBV7-3A0A075B6L6 115 aa2.14□□□□□ -2.07
SF3B1-205ENST00000424674 H3BUT2 72 aa2.14□□□□□ -2.07
SF3B1-205ENST00000424674 CTSGP08311 255 aa2.14□□□□□ -2.07
SF3B1-205ENST00000424674 COX6CP09669 75 aa2.14□□□□□ -2.07
SF3B1-205ENST00000424674 PRB4P10163 310 aaPredicted RBP2.14□□□□□ -2.07
SF3B1-205ENST00000424674 DEFB134Q4QY38 66 aa2.14□□□□□ -2.07
SF3B1-205ENST00000424674 SPATA45Q537H7 98 aa2.14□□□□□ -2.07
SF3B1-205ENST00000424674 Q8N9L7 120 aa2.14□□□□□ -2.07
SF3B1-205ENST00000424674 IFI27L1Q96BM0 104 aa2.14□□□□□ -2.07
SF3B1-205ENST00000424674 LINC00167Q96N53 147 aa2.14□□□□□ -2.07
SF3B1-205ENST00000424674 LIMD2Q9BT23 127 aa2.14□□□□□ -2.07
SF3B1-205ENST00000424674 CCL26Q9Y258 94 aa2.14□□□□□ -2.07
SF3B1-205ENST00000424674 BLMP54132 1417 aaPredicted RBP2.14□□□□□ -2.07
SF3B1-205ENST00000424674 CABIN1Q9Y6J0 2220 aa2.14□□□□□ -2.07
SF3B1-205ENST00000424674 DIP2BQ9P265 1576 aa2.14□□□□□ -2.07
SF3B1-205ENST00000424674 PLXNA2O75051 1894 aa2.14□□□□□ -2.07
SF3B1-205ENST00000424674 KIF14Q15058 1648 aa2.13□□□□□ -2.07
SF3B1-205ENST00000424674 PTPN23Q9H3S7 1636 aa2.13□□□□□ -2.07
SF3B1-205ENST00000424674 MAP3K4Q9Y6R4 1608 aa2.13□□□□□ -2.07
SF3B1-205ENST00000424674 PRRC2AP48634 2157 aaKnown RBP2.13□□□□□ -2.07
SF3B1-205ENST00000424674 LAMB1P07942 1786 aa2.13□□□□□ -2.07
SF3B1-205ENST00000424674 MAGI3Q5TCQ9 1506 aa2.13□□□□□ -2.07
SF3B1-205ENST00000424674 DISP1Q96F81 1524 aa2.13□□□□□ -2.07
SF3B1-205ENST00000424674 UGGT2Q9NYU1 1516 aa2.13□□□□□ -2.07
SF3B1-205ENST00000424674 KIAA1549LQ6ZVL6 1849 aa2.13□□□□□ -2.07
SF3B1-205ENST00000424674 A0A0J9YY99 117 aa2.13□□□□□ -2.07
SF3B1-205ENST00000424674 A8MU10 97 aa2.13□□□□□ -2.07
SF3B1-205ENST00000424674 F2Z2F3 143 aa2.13□□□□□ -2.07
SF3B1-205ENST00000424674 H7BZZ5 65 aa2.13□□□□□ -2.07
SF3B1-205ENST00000424674 UBE2D3P61077 147 aa2.13□□□□□ -2.07
SF3B1-205ENST00000424674 UBE2D2P62837 147 aa2.13□□□□□ -2.07
SF3B1-205ENST00000424674 KLKP1Q107X0 134 aa2.13□□□□□ -2.07
SF3B1-205ENST00000424674 MOBPQ13875 183 aa2.13□□□□□ -2.07
SF3B1-205ENST00000424674 C10orf128Q5T292 105 aa2.13□□□□□ -2.07
SF3B1-205ENST00000424674 PRO0461Q9UI25 63 aa2.13□□□□□ -2.07
SF3B1-205ENST00000424674 UNC13BO14795 1591 aa2.13□□□□□ -2.07
SF3B1-205ENST00000424674 PLXNA4Q9HCM2 1894 aa2.13□□□□□ -2.07
SF3B1-205ENST00000424674 NRXN1Q9ULB1 1477 aa2.13□□□□□ -2.07
SF3B1-205ENST00000424674 SLIT2O94813 1529 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms