RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, human

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQA1-204	ENST00000422863	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.64	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	UFSP1	Q6NVU6	142 aa		4.64	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	STPG4	Q8N801	248 aa		4.64	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	OR10G7	Q8NGN6	311 aa		4.64	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	CMTM2	Q8TAZ6	248 aa		4.64	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	TMED6	Q8WW62	240 aa		4.64	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	CHCHD7	Q9BUK0	85 aa		4.64	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	TAAR5	O14804	337 aa		4.63	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	TCRB	P04435	133 aa		4.63	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	S100A4	P26447	101 aa	Known RBP	4.63	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	S100A10	P60903	97 aa		4.63	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	CNBP	P62633	177 aa	Known RBP	4.63	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	NHLH2	Q02577	135 aa		4.63	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	MIA	Q16674	131 aa		4.63	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	LINC00269	Q8N2A0	174 aa		4.63	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	TMEM252	Q8N6L7	170 aa		4.63	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	CLRN3	Q8NCR9	226 aa		4.63	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	PRSS3P2	Q8NHM4	247 aa		4.63	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	CHAC2	Q8WUX2	184 aa		4.63	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	PTH2	Q96A98	100 aa		4.63	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	CHCHD5	Q9BSY4	110 aa		4.63	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	SLIRP	Q9GZT3	109 aa	Known RBP	4.63	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	OTOR	Q9NRC9	128 aa		4.63	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	AP5S1	Q9NUS5	200 aa		4.63	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	MBD2	Q9UBB5	411 aa		4.63	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	TRBV6-8	A0A0A6YYG3	113 aa		4.62	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	UBE2D3	P61077	147 aa		4.62	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	UBE2D2	P62837	147 aa		4.62	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	HBG1	P69891	147 aa		4.62	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	HBG2	P69892	147 aa		4.62	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	GAGE6	Q13070	117 aa		4.62	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	PRR4	Q16378	134 aa		4.62	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	ATP6V1F	Q16864	119 aa		4.62	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	VAX2	Q9UIW0	290 aa		4.62	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	TRBV7-3	A0A075B6L6	115 aa		4.61	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.61	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	IGKV3D-20	A0A0C4DH25	116 aa		4.61	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863		H3BVH4	76 aa		4.61	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	NDUFB6	O95139	128 aa		4.61	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	PTTG1	O95997	202 aa		4.61	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	SMIM18	P0DKX4	95 aa		4.61	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	PVALB	P20472	110 aa	Predicted RBP	4.61	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	RPL36A	P83881	106 aa	Known RBP	4.61	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	PRNT	Q86SH4	94 aa		4.61	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	STX12	Q86Y82	276 aa		4.61	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	RPL36AL	Q969Q0	106 aa	Known RBP	4.61	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	LYRM2	Q9NU23	88 aa	Predicted RBP	4.61	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	PSG8	Q9UQ74	426 aa		4.61	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	GRIFIN	A4D1Z8	144 aa		4.6	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	FAM231B	A6NCW3	169 aa		4.6	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	HMGB3	O15347	200 aa	Known RBP	4.6	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	RBX1	P62877	108 aa		4.6	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	RAB32	Q13637	225 aa		4.6	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	FAM74A1	Q5RGS3	127 aa		4.6	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	PRR26	Q8N8Z3	221 aa		4.6	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	OR5C1	Q8NGR4	320 aa		4.6	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	MITD1	Q8WV92	249 aa		4.6	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	NDFIP1	Q9BT67	221 aa		4.6	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	OR5AC2	Q9NZP5	309 aa		4.6	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863		V9GYH0	126 aa		4.6	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863		A0A096LNI7	61 aa		4.59	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863		H3BMQ9	156 aa		4.59	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	NDUFS6	O75380	124 aa	Known RBP	4.59	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	ARMS2	P0C7Q2	107 aa		4.59	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	REG3A	Q06141	175 aa		4.59	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	HIGD2B	Q4VC39	106 aa		4.59	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	SMUG1	Q53HV7	270 aa		4.59	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	KHDC3L	Q587J8	217 aa		4.59	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	KRTAP5-11	Q6L8G4	156 aa		4.59	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	NTM-AS1	Q6ZSK4	140 aa		4.59	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	NEXN-AS1	Q8NBZ9	246 aa		4.59	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	WDR61	Q9GZS3	305 aa	Known RBP	4.59	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	PRR34	Q9NV39	138 aa		4.59	□□□□□ -1.67
HLA-DQA1-204	ENST00000422863	TRAV26-2	A0A0B4J265	109 aa		4.58	□□□□□ -1.68
HLA-DQA1-204	ENST00000422863		M0R036	132 aa		4.58	□□□□□ -1.68
HLA-DQA1-204	ENST00000422863		M0R381	172 aa		4.58	□□□□□ -1.68
HLA-DQA1-204	ENST00000422863	RHOD	O00212	210 aa		4.58	□□□□□ -1.68
HLA-DQA1-204	ENST00000422863	IFNA7	P01567	189 aa		4.58	□□□□□ -1.68
HLA-DQA1-204	ENST00000422863	RPS10	P46783	165 aa	Known RBP	4.58	□□□□□ -1.68
HLA-DQA1-204	ENST00000422863		Q6ZRP5	223 aa		4.58	□□□□□ -1.68
HLA-DQA1-204	ENST00000422863	OR11H4	Q8NGC9	324 aa		4.58	□□□□□ -1.68
HLA-DQA1-204	ENST00000422863	SFRP2	Q96HF1	295 aa		4.58	□□□□□ -1.68
HLA-DQA1-204	ENST00000422863	SEC22C	Q9BRL7	303 aa		4.58	□□□□□ -1.68
HLA-DQA1-204	ENST00000422863	GFRA4	Q9GZZ7	299 aa		4.58	□□□□□ -1.68
HLA-DQA1-204	ENST00000422863	IL36B	Q9NZH7	164 aa		4.58	□□□□□ -1.68
HLA-DQA1-204	ENST00000422863	CRCT1	Q9UGL9	99 aa		4.58	□□□□□ -1.68
HLA-DQA1-204	ENST00000422863	MUC17	Q685J3	4493 aa		4.58	□□□□□ -1.68
HLA-DQA1-204	ENST00000422863	TMSB15B	A0A087X1C1	80 aa		4.57	□□□□□ -1.68
HLA-DQA1-204	ENST00000422863	TRAV34	A0A0B4J273	112 aa		4.57	□□□□□ -1.68
HLA-DQA1-204	ENST00000422863	TRBV10-1	A0A0K0K1A3	114 aa		4.57	□□□□□ -1.68
HLA-DQA1-204	ENST00000422863		B4DEV8	164 aa		4.57	□□□□□ -1.68
HLA-DQA1-204	ENST00000422863	BTC	P35070	178 aa		4.57	□□□□□ -1.68
HLA-DQA1-204	ENST00000422863	TAS2R45	P59539	299 aa		4.57	□□□□□ -1.68
HLA-DQA1-204	ENST00000422863	DEFA3	P59666	94 aa		4.57	□□□□□ -1.68
HLA-DQA1-204	ENST00000422863	FLI1	Q01543	452 aa	Predicted RBP	4.57	□□□□□ -1.68
HLA-DQA1-204	ENST00000422863	ZFP69	Q49AA0	526 aa		4.57	□□□□□ -1.68
HLA-DQA1-204	ENST00000422863	PIK3CD-AS1	Q5SR53	167 aa		4.57	□□□□□ -1.68
HLA-DQA1-204	ENST00000422863	C15orf56	Q8N910	161 aa		4.57	□□□□□ -1.68
HLA-DQA1-204	ENST00000422863	DERL1	Q9BUN8	251 aa		4.57	□□□□□ -1.68
HLA-DQA1-204	ENST00000422863	PHLDA3	Q9Y5J5	127 aa		4.57	□□□□□ -1.68

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