RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 MEF2BQ02080 365 aaPredicted RBP14.88□□□□□ -0.03
TRAF4-204ENST00000422344 GAGE1Q13065 139 aa14.88□□□□□ -0.03
TRAF4-204ENST00000422344 GAGE4Q13068 117 aa14.88□□□□□ -0.03
TRAF4-204ENST00000422344 GAGE5Q13069 117 aa14.88□□□□□ -0.03
TRAF4-204ENST00000422344 GAGE13Q4V321 117 aa14.88□□□□□ -0.03
TRAF4-204ENST00000422344 C9orf62Q8N4C0 152 aa14.88□□□□□ -0.03
TRAF4-204ENST00000422344 SFRP2Q96HF1 295 aa14.88□□□□□ -0.03
TRAF4-204ENST00000422344 DERL1Q9BUN8 251 aa14.88□□□□□ -0.03
TRAF4-204ENST00000422344 A0A087WWL8 130 aa14.87□□□□□ -0.03
TRAF4-204ENST00000422344 PDE6DO43924 150 aa14.87□□□□□ -0.03
TRAF4-204ENST00000422344 CRYGDP07320 174 aa14.87□□□□□ -0.03
TRAF4-204ENST00000422344 CXCL1P09341 107 aa14.87□□□□□ -0.03
TRAF4-204ENST00000422344 CENPWQ5EE01 88 aa14.87□□□□□ -0.03
TRAF4-204ENST00000422344 UFSP1Q6NVU6 142 aa14.87□□□□□ -0.03
TRAF4-204ENST00000422344 GTSF1LQ9H1H1 148 aa14.87□□□□□ -0.03
TRAF4-204ENST00000422344 MSRB1Q9NZV6 116 aa14.87□□□□□ -0.03
TRAF4-204ENST00000422344 LELP1Q5T871 98 aa14.86□□□□□ -0.03
TRAF4-204ENST00000422344 SPATA12Q7Z6I5 190 aa14.86□□□□□ -0.03
TRAF4-204ENST00000422344 BCL2P10415 239 aa14.85□□□□□ -0.03
TRAF4-204ENST00000422344 Q6ZRN7 208 aaPredicted RBP14.85□□□□□ -0.03
TRAF4-204ENST00000422344 C14orf178Q8N769 122 aaPredicted RBP14.85□□□□□ -0.03
TRAF4-204ENST00000422344 TNFRSF18Q9Y5U5 241 aa14.85□□□□□ -0.03
TRAF4-204ENST00000422344 EREGO14944 169 aa14.84□□□□□ -0.03
TRAF4-204ENST00000422344 TAGLN2P37802 199 aaKnown RBP14.84□□□□□ -0.03
TRAF4-204ENST00000422344 GNG4P50150 75 aa14.84□□□□□ -0.03
TRAF4-204ENST00000422344 ERVFC1-1P60608 527 aa14.84□□□□□ -0.03
TRAF4-204ENST00000422344 DAZAP1Q96EP5 407 aaKnown RBP14.84□□□□□ -0.03
TRAF4-204ENST00000422344 MED9Q9NWA0 146 aa14.84□□□□□ -0.03
TRAF4-204ENST00000422344 VAX2Q9UIW0 290 aa14.84□□□□□ -0.03
TRAF4-204ENST00000422344 LINC01556Q5JQF7 62 aa14.83□□□□□ -0.04
TRAF4-204ENST00000422344 OR10AG1Q8NH19 301 aa14.83□□□□□ -0.04
TRAF4-204ENST00000422344 SPANXN1Q5VSR9 72 aa14.82□□□□□ -0.04
TRAF4-204ENST00000422344 SMIM12Q96EX1 92 aa14.82□□□□□ -0.04
TRAF4-204ENST00000422344 APOBP04114 4563 aaKnown RBP14.82□□□□□ -0.04
TRAF4-204ENST00000422344 RAB19A4D1S5 217 aa14.81□□□□□ -0.04
TRAF4-204ENST00000422344 OR5AL1P0C617 328 aa14.81□□□□□ -0.04
TRAF4-204ENST00000422344 LINC00694P0DN24 101 aa14.81□□□□□ -0.04
TRAF4-204ENST00000422344 A0A087WWC5 75 aa14.8□□□□□ -0.04
TRAF4-204ENST00000422344 SNAI2O43623 268 aa14.8□□□□□ -0.04
TRAF4-204ENST00000422344 IGHV3-30P01768 117 aa14.8□□□□□ -0.04
TRAF4-204ENST00000422344 IGHV3-33P01772 117 aa14.8□□□□□ -0.04
TRAF4-204ENST00000422344 IGHV3-30-3P0DP02 117 aa14.8□□□□□ -0.04
TRAF4-204ENST00000422344 IGHV3-30-5P0DP03 117 aa14.8□□□□□ -0.04
TRAF4-204ENST00000422344 ALKAL2Q6UX46 152 aa14.8□□□□□ -0.04
TRAF4-204ENST00000422344 BIN3Q9NQY0 253 aa14.8□□□□□ -0.04
TRAF4-204ENST00000422344 DNAH5Q8TE73 4624 aa14.8□□□□□ -0.04
TRAF4-204ENST00000422344 MUC21A0A0G2JKD1 596 aa14.79□□□□□ -0.04
TRAF4-204ENST00000422344 MUC21A0A140T8X8 626 aa14.79□□□□□ -0.04
TRAF4-204ENST00000422344 RPS20P60866 119 aaKnown RBP14.79□□□□□ -0.04
TRAF4-204ENST00000422344 BLOC1S1P78537 153 aa14.79□□□□□ -0.04
TRAF4-204ENST00000422344 ZNF56Q15929 161 aa14.79□□□□□ -0.04
TRAF4-204ENST00000422344 OR2D3Q8NGH3 330 aa14.79□□□□□ -0.04
TRAF4-204ENST00000422344 SSBP4Q9BWG4 385 aaPredicted RBP14.79□□□□□ -0.04
TRAF4-204ENST00000422344 Q9UF83 564 aa14.79□□□□□ -0.04
TRAF4-204ENST00000422344 TRBV10-1A0A0K0K1A3 114 aa14.78□□□□□ -0.04
TRAF4-204ENST00000422344 IGLV2-8P01709 118 aa14.78□□□□□ -0.04
TRAF4-204ENST00000422344 SSTP61278 116 aa14.78□□□□□ -0.04
TRAF4-204ENST00000422344 RPL36AP83881 106 aaKnown RBP14.78□□□□□ -0.04
TRAF4-204ENST00000422344 Q8N1X5 172 aa14.78□□□□□ -0.04
TRAF4-204ENST00000422344 RPL36ALQ969Q0 106 aaKnown RBP14.78□□□□□ -0.04
TRAF4-204ENST00000422344 TPPP3Q9BW30 176 aa14.78□□□□□ -0.04
TRAF4-204ENST00000422344 KRTAP10-2P60368 255 aa14.77□□□□□ -0.05
TRAF4-204ENST00000422344 RAB4BP61018 213 aa14.77□□□□□ -0.05
TRAF4-204ENST00000422344 XKRY2A2RUG3 117 aa14.76□□□□□ -0.05
TRAF4-204ENST00000422344 IBA57-AS1B1ANH7 110 aa14.76□□□□□ -0.05
TRAF4-204ENST00000422344 PSCAO43653 123 aa14.76□□□□□ -0.05
TRAF4-204ENST00000422344 P01737 135 aa14.76□□□□□ -0.05
TRAF4-204ENST00000422344 SMIM17P0DL12 118 aa14.76□□□□□ -0.05
TRAF4-204ENST00000422344 Q9HAA7 133 aa14.76□□□□□ -0.05
TRAF4-204ENST00000422344 F5H697 171 aa14.75□□□□□ -0.05
TRAF4-204ENST00000422344 FER1L6-AS1Q8NA97 138 aa14.75□□□□□ -0.05
TRAF4-204ENST00000422344 AP1S3Q96PC3 154 aa14.75□□□□□ -0.05
TRAF4-204ENST00000422344 TRBV20OR9-2A0A075B6H5 130 aa14.74□□□□□ -0.05
TRAF4-204ENST00000422344 A0A087WTM6 91 aa14.74□□□□□ -0.05
TRAF4-204ENST00000422344 C19orf71A6NCJ1 209 aa14.74□□□□□ -0.05
TRAF4-204ENST00000422344 GZMBP10144 247 aa14.74□□□□□ -0.05
TRAF4-204ENST00000422344 NKX2-5P52952 324 aaPredicted RBP14.74□□□□□ -0.05
TRAF4-204ENST00000422344 TRBV7-3A0A075B6L6 115 aa14.73□□□□□ -0.05
TRAF4-204ENST00000422344 PGPEP1Q9NXJ5 209 aa14.73□□□□□ -0.05
TRAF4-204ENST00000422344 URGCP-MRPS24S4R325 110 aa14.73□□□□□ -0.05
TRAF4-204ENST00000422344 A0A1B0GVG6 124 aa14.72□□□□□ -0.05
TRAF4-204ENST00000422344 RBFOX3A6NFN3 312 aa14.72□□□□□ -0.05
TRAF4-204ENST00000422344 CACNG7P62955 275 aa14.72□□□□□ -0.05
TRAF4-204ENST00000422344 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.72□□□□□ -0.05
TRAF4-204ENST00000422344 IGLC6P0CF74 106 aa14.71□□□□□ -0.05
TRAF4-204ENST00000422344 UBE2D3P61077 147 aa14.71□□□□□ -0.05
TRAF4-204ENST00000422344 UBE2D2P62837 147 aa14.71□□□□□ -0.05
TRAF4-204ENST00000422344 LAGE3Q14657 143 aa14.71□□□□□ -0.05
TRAF4-204ENST00000422344 F2Z2F3 143 aa14.7□□□□□ -0.06
TRAF4-204ENST00000422344 TOR2AQ5JU69 321 aa14.7□□□□□ -0.06
TRAF4-204ENST00000422344 CDPF1Q6NVV7 123 aa14.7□□□□□ -0.06
TRAF4-204ENST00000422344 OR10G8Q8NGN5 311 aa14.7□□□□□ -0.06
TRAF4-204ENST00000422344 HERC1Q15751 4861 aa14.7□□□□□ -0.06
TRAF4-204ENST00000422344 KCNIP4Q6PIL6 250 aa14.69□□□□□ -0.06
TRAF4-204ENST00000422344 Q8N3U1 123 aa14.69□□□□□ -0.06
TRAF4-204ENST00000422344 TMEM250H0YL14 139 aa14.68□□□□□ -0.06
TRAF4-204ENST00000422344 MGPP08493 103 aa14.68□□□□□ -0.06
TRAF4-204ENST00000422344 DAZ4Q86SG3 579 aaKnown RBP14.68□□□□□ -0.06
TRAF4-204ENST00000422344 NEXN-AS1Q8NBZ9 246 aa14.68□□□□□ -0.06
TRAF4-204ENST00000422344 NUDT10Q8NFP7 164 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms