RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 RPL7L1Q6DKI1 246 aaKnown RBP0.13□□□□□ -2.39
LINC00397-201ENST00000422074 VSTM2AQ8TAG5 236 aa0.13□□□□□ -2.39
LINC00397-201ENST00000422074 COX7B2Q8TF08 81 aa0.13□□□□□ -2.39
LINC00397-201ENST00000422074 SAR1AQ9NR31 198 aa0.13□□□□□ -2.39
LINC00397-201ENST00000422074 GSKIPQ9P0R6 139 aa0.13□□□□□ -2.39
LINC00397-201ENST00000422074 FSIP2Q5CZC0 6907 aa0.13□□□□□ -2.39
LINC00397-201ENST00000422074 BDP1A6H8Y1 2624 aa0.13□□□□□ -2.39
LINC00397-201ENST00000422074 GVQW2A0A096LPI5 108 aaPredicted RBP0.12□□□□□ -2.39
LINC00397-201ENST00000422074 NMBP08949 121 aa0.12□□□□□ -2.39
LINC00397-201ENST00000422074 ACYP2P14621 99 aa0.12□□□□□ -2.39
LINC00397-201ENST00000422074 NPC2P61916 151 aa0.12□□□□□ -2.39
LINC00397-201ENST00000422074 SPANXN1Q5VSR9 72 aa0.12□□□□□ -2.39
LINC00397-201ENST00000422074 SMIM3Q9BZL3 60 aa0.12□□□□□ -2.39
LINC00397-201ENST00000422074 SCP2D1Q9UJQ7 156 aa0.12□□□□□ -2.39
LINC00397-201ENST00000422074 NRXN2Q9P2S2 1712 aa0.12□□□□□ -2.39
LINC00397-201ENST00000422074 DISP2A7MBM2 1401 aa0.12□□□□□ -2.39
LINC00397-201ENST00000422074 ZFYVE26Q68DK2 2539 aa0.12□□□□□ -2.39
LINC00397-201ENST00000422074 DMBT1Q9UGM3 2413 aaPredicted RBP0.12□□□□□ -2.39
LINC00397-201ENST00000422074 M0R129 80 aa0.11□□□□□ -2.39
LINC00397-201ENST00000422074 LINC01545Q5VT33 79 aa0.11□□□□□ -2.39
LINC00397-201ENST00000422074 PSMG3Q9BT73 122 aaPredicted RBP0.11□□□□□ -2.39
LINC00397-201ENST00000422074 NDUFA12Q9UI09 145 aa0.11□□□□□ -2.39
LINC00397-201ENST00000422074 UNC13AQ9UPW8 1703 aa0.1□□□□□ -2.39
LINC00397-201ENST00000422074 SPAG17Q6Q759 2223 aa0.1□□□□□ -2.39
LINC00397-201ENST00000422074 ARHGEF10O15013 1369 aa0.1□□□□□ -2.39
LINC00397-201ENST00000422074 PLXNA1Q9UIW2 1896 aa0.1□□□□□ -2.39
LINC00397-201ENST00000422074 A0A087WTM6 91 aa0.1□□□□□ -2.39
LINC00397-201ENST00000422074 A6NIN4 97 aa0.1□□□□□ -2.39
LINC00397-201ENST00000422074 CKS1BP61024 79 aa0.1□□□□□ -2.39
LINC00397-201ENST00000422074 HIST1H1AQ02539 215 aaPredicted RBP0.1□□□□□ -2.39
LINC00397-201ENST00000422074 MIC13Q5XKP0 118 aa0.1□□□□□ -2.39
LINC00397-201ENST00000422074 BATF3Q9NR55 127 aa0.1□□□□□ -2.39
LINC00397-201ENST00000422074 TPRP12270 2363 aaKnown RBP0.1□□□□□ -2.39
LINC00397-201ENST00000422074 PHIPQ8WWQ0 1821 aa0.09□□□□□ -2.39
LINC00397-201ENST00000422074 FAM236AA0A1B0GUQ0 79 aa0.09□□□□□ -2.4
LINC00397-201ENST00000422074 FAM236BA0A1B0GV22 79 aa0.09□□□□□ -2.4
LINC00397-201ENST00000422074 M0R2Z0 102 aa0.09□□□□□ -2.4
LINC00397-201ENST00000422074 IGLC6P0CF74 106 aa0.09□□□□□ -2.4
LINC00397-201ENST00000422074 GCHFRP30047 84 aa0.09□□□□□ -2.4
LINC00397-201ENST00000422074 SPRR2GQ9BYE4 73 aa0.09□□□□□ -2.4
LINC00397-201ENST00000422074 RPRMQ9NS64 109 aa0.09□□□□□ -2.4
LINC00397-201ENST00000422074 NCOR2Q9Y618 2525 aa0.09□□□□□ -2.4
LINC00397-201ENST00000422074 TTC28Q96AY4 2481 aa0.08□□□□□ -2.4
LINC00397-201ENST00000422074 K7ERU9 68 aa0.08□□□□□ -2.4
LINC00397-201ENST00000422074 PIRTP0C851 137 aa0.08□□□□□ -2.4
LINC00397-201ENST00000422074 SYNE1Q8NF91 8797 aaKnown RBP0.08□□□□□ -2.4
LINC00397-201ENST00000422074 SSPOA2VEC9 5147 aa0.08□□□□□ -2.4
LINC00397-201ENST00000422074 PARP14Q460N5 1801 aa0.08□□□□□ -2.4
LINC00397-201ENST00000422074 SSC5DA1L4H1 1573 aa0.07□□□□□ -2.4
LINC00397-201ENST00000422074 TMEM14DPA8MWL7 114 aa0.07□□□□□ -2.4
LINC00397-201ENST00000422074 ARPC5O15511 151 aa0.07□□□□□ -2.4
LINC00397-201ENST00000422074 NCR2O95944 276 aa0.07□□□□□ -2.4
LINC00397-201ENST00000422074 IFNA17P01571 189 aa0.07□□□□□ -2.4
LINC00397-201ENST00000422074 PIPP12273 146 aaPredicted RBP0.07□□□□□ -2.4
LINC00397-201ENST00000422074 Q96NJ1 140 aa0.07□□□□□ -2.4
LINC00397-201ENST00000422074 MYO7AQ13402 2215 aa0.07□□□□□ -2.4
LINC00397-201ENST00000422074 ASXL3Q9C0F0 2248 aa0.07□□□□□ -2.4
LINC00397-201ENST00000422074 CDK5RAP2Q96SN8 1893 aa0.07□□□□□ -2.4
LINC00397-201ENST00000422074 PIEZO1Q92508 2521 aa0.07□□□□□ -2.4
LINC00397-201ENST00000422074 MUC22E2RYF6 1773 aaPredicted RBP0.06□□□□□ -2.4
LINC00397-201ENST00000422074 F8P00451 2351 aa0.06□□□□□ -2.4
LINC00397-201ENST00000422074 DAPK1P53355 1430 aa0.06□□□□□ -2.4
LINC00397-201ENST00000422074 IL5P05113 134 aa0.06□□□□□ -2.4
LINC00397-201ENST00000422074 IFITM1P13164 125 aa0.06□□□□□ -2.4
LINC00397-201ENST00000422074 Q6ZRX8 168 aa0.06□□□□□ -2.4
LINC00397-201ENST00000422074 Q6ZUT4 128 aa0.06□□□□□ -2.4
LINC00397-201ENST00000422074 C10orf82Q8WW14 230 aa0.06□□□□□ -2.4
LINC00397-201ENST00000422074 MYH13Q9UKX3 1938 aa0.06□□□□□ -2.4
LINC00397-201ENST00000422074 LAMB1P07942 1786 aa0.06□□□□□ -2.4
LINC00397-201ENST00000422074 ABCA1O95477 2261 aa0.06□□□□□ -2.4
LINC00397-201ENST00000422074 UBR5O95071 2799 aaPredicted RBP0.06□□□□□ -2.4
LINC00397-201ENST00000422074 ABCA12Q86UK0 2595 aa0.05□□□□□ -2.4
LINC00397-201ENST00000422074 FHAD1B1AJZ9 1412 aa0.05□□□□□ -2.4
LINC00397-201ENST00000422074 CACNA1HO95180 2353 aa0.05□□□□□ -2.4
LINC00397-201ENST00000422074 PRG4Q92954 1404 aaPredicted RBP0.05□□□□□ -2.4
LINC00397-201ENST00000422074 TRGV1A0A0A0MS02 117 aa0.05□□□□□ -2.4
LINC00397-201ENST00000422074 TSPAN19P0C672 248 aa0.05□□□□□ -2.4
LINC00397-201ENST00000422074 SMIM6P0DI80 62 aa0.05□□□□□ -2.4
LINC00397-201ENST00000422074 LINC00694P0DN24 101 aa0.05□□□□□ -2.4
LINC00397-201ENST00000422074 EDDM3BP56851 147 aa0.05□□□□□ -2.4
LINC00397-201ENST00000422074 RRAS2P62070 204 aaPredicted RBP0.05□□□□□ -2.4
LINC00397-201ENST00000422074 C9orf116Q5BN46 136 aaPredicted RBP0.05□□□□□ -2.4
LINC00397-201ENST00000422074 UBE2DNLQ8IWF7 75 aa0.05□□□□□ -2.4
LINC00397-201ENST00000422074 TSTD1Q8NFU3 115 aa0.05□□□□□ -2.4
LINC00397-201ENST00000422074 COPZ2Q9P299 210 aa0.05□□□□□ -2.4
LINC00397-201ENST00000422074 U3KQA8 63 aa0.05□□□□□ -2.4
LINC00397-201ENST00000422074 COL7A1Q02388 2944 aa0.05□□□□□ -2.4
LINC00397-201ENST00000422074 TMEM2Q9UHN6 1383 aa0.05□□□□□ -2.4
LINC00397-201ENST00000422074 CACNA1CQ13936 2221 aa0.05□□□□□ -2.4
LINC00397-201ENST00000422074 CEP152O94986 1710 aa0.04□□□□□ -2.4
LINC00397-201ENST00000422074 SNCGO76070 127 aa0.04□□□□□ -2.4
LINC00397-201ENST00000422074 INSL4Q14641 139 aa0.04□□□□□ -2.4
LINC00397-201ENST00000422074 SPTSSAQ969W0 71 aa0.04□□□□□ -2.4
LINC00397-201ENST00000422074 AHCTF1Q8WYP5 2266 aa0.04□□□□□ -2.4
LINC00397-201ENST00000422074 ARFGEF1Q9Y6D6 1849 aa0.03□□□□□ -2.4
LINC00397-201ENST00000422074 OTOGQ6ZRI0 2925 aa0.03□□□□□ -2.4
LINC00397-201ENST00000422074 ABCA4P78363 2273 aa0.03□□□□□ -2.4
LINC00397-201ENST00000422074 ADGRB1O14514 1584 aa0.03□□□□□ -2.4
LINC00397-201ENST00000422074 JMJD1CQ15652 2540 aa0.03□□□□□ -2.4
LINC00397-201ENST00000422074 TRAV1-2A0A0B4J238 106 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms