RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 OR10J3Q5JRS4 329 aa3.64□□□□□ -1.83
HDAC8-212ENST00000421523 SAPCD1Q5SSQ6 148 aa3.64□□□□□ -1.83
HDAC8-212ENST00000421523 DAZ4Q86SG3 579 aaKnown RBP3.64□□□□□ -1.83
HDAC8-212ENST00000421523 CYB561D1Q8N8Q1 229 aa3.64□□□□□ -1.83
HDAC8-212ENST00000421523 HSD17B11Q8NBQ5 300 aa3.64□□□□□ -1.83
HDAC8-212ENST00000421523 SH3BGRL3Q9H299 93 aa3.64□□□□□ -1.83
HDAC8-212ENST00000421523 DAZ3Q9NR90 486 aaKnown RBP3.64□□□□□ -1.83
HDAC8-212ENST00000421523 IL36BQ9NZH7 164 aa3.64□□□□□ -1.83
HDAC8-212ENST00000421523 TNFSF18Q9UNG2 199 aa3.64□□□□□ -1.83
HDAC8-212ENST00000421523 TRAV34A0A0B4J273 112 aa3.63□□□□□ -1.83
HDAC8-212ENST00000421523 RNF222A6NCQ9 220 aa3.63□□□□□ -1.83
HDAC8-212ENST00000421523 FABP5P3A8MUU1 101 aa3.63□□□□□ -1.83
HDAC8-212ENST00000421523 A8MWV9 139 aa3.63□□□□□ -1.83
HDAC8-212ENST00000421523 G3V3Q6 166 aa3.63□□□□□ -1.83
HDAC8-212ENST00000421523 CXorf1O96002 111 aa3.63□□□□□ -1.83
HDAC8-212ENST00000421523 MBP02144 154 aa3.63□□□□□ -1.83
HDAC8-212ENST00000421523 ATRAIDQ6UW56 229 aa3.63□□□□□ -1.83
HDAC8-212ENST00000421523 PRNTQ86SH4 94 aa3.63□□□□□ -1.83
HDAC8-212ENST00000421523 NIT1Q86X76 327 aa3.63□□□□□ -1.83
HDAC8-212ENST00000421523 C14orf178Q8N769 122 aaPredicted RBP3.63□□□□□ -1.83
HDAC8-212ENST00000421523 DNAJC30Q96LL9 226 aa3.63□□□□□ -1.83
HDAC8-212ENST00000421523 NDFIP1Q9BT67 221 aa3.63□□□□□ -1.83
HDAC8-212ENST00000421523 TM2D2Q9BX73 214 aa3.63□□□□□ -1.83
HDAC8-212ENST00000421523 KRTAP4-7Q9BYR0 210 aa3.63□□□□□ -1.83
HDAC8-212ENST00000421523 TMEM167BQ9NRX6 74 aa3.63□□□□□ -1.83
HDAC8-212ENST00000421523 ALG5Q9Y673 324 aa3.63□□□□□ -1.83
HDAC8-212ENST00000421523 ARL2-SNX15V9GYD0 113 aa3.63□□□□□ -1.83
HDAC8-212ENST00000421523 TRAV8-3A0A0A6YYJ7 113 aa3.62□□□□□ -1.83
HDAC8-212ENST00000421523 GAGE12JA6NER3 117 aa3.62□□□□□ -1.83
HDAC8-212ENST00000421523 FAM74A7A6NL05 159 aa3.62□□□□□ -1.83
HDAC8-212ENST00000421523 KRBOX1C9JBD0 128 aa3.62□□□□□ -1.83
HDAC8-212ENST00000421523 PANO1I0J062 215 aa3.62□□□□□ -1.83
HDAC8-212ENST00000421523 K7EQM0 130 aa3.62□□□□□ -1.83
HDAC8-212ENST00000421523 DEFA1P59665 94 aa3.62□□□□□ -1.83
HDAC8-212ENST00000421523 DEFA3P59666 94 aa3.62□□□□□ -1.83
HDAC8-212ENST00000421523 GAGE1Q13065 139 aa3.62□□□□□ -1.83
HDAC8-212ENST00000421523 GAGE4Q13068 117 aa3.62□□□□□ -1.83
HDAC8-212ENST00000421523 GAGE5Q13069 117 aa3.62□□□□□ -1.83
HDAC8-212ENST00000421523 ZNF674Q2M3X9 581 aa3.62□□□□□ -1.83
HDAC8-212ENST00000421523 GAGE13Q4V321 117 aa3.62□□□□□ -1.83
HDAC8-212ENST00000421523 LCE1DQ5T752 114 aa3.62□□□□□ -1.83
HDAC8-212ENST00000421523 RPL7L1Q6DKI1 246 aaKnown RBP3.62□□□□□ -1.83
HDAC8-212ENST00000421523 OR2T35Q8NGX2 323 aa3.62□□□□□ -1.83
HDAC8-212ENST00000421523 ZC2HC1AQ96GY0 325 aa3.62□□□□□ -1.83
HDAC8-212ENST00000421523 LINC01600Q96MT4 127 aa3.62□□□□□ -1.83
HDAC8-212ENST00000421523 ACTR3CQ9C0K3 210 aaPredicted RBP3.62□□□□□ -1.83
HDAC8-212ENST00000421523 A0A087WWC5 75 aa3.61□□□□□ -1.83
HDAC8-212ENST00000421523 TRBV6-1A0A0K0K1D8 114 aa3.61□□□□□ -1.83
HDAC8-212ENST00000421523 CTXND1A0A1B0GTU2 59 aa3.61□□□□□ -1.83
HDAC8-212ENST00000421523 RBFOX3A6NFN3 312 aa3.61□□□□□ -1.83
HDAC8-212ENST00000421523 ARMS2P0C7Q2 107 aa3.61□□□□□ -1.83
HDAC8-212ENST00000421523 FGF8P55075 233 aaPredicted RBP3.61□□□□□ -1.83
HDAC8-212ENST00000421523 ZFP69Q49AA0 526 aa3.61□□□□□ -1.83
HDAC8-212ENST00000421523 Q86TA4 180 aa3.61□□□□□ -1.83
HDAC8-212ENST00000421523 BAALCQ8WXS3 180 aa3.61□□□□□ -1.83
HDAC8-212ENST00000421523 SFRP2Q96HF1 295 aa3.61□□□□□ -1.83
HDAC8-212ENST00000421523 CYTL1Q9NRR1 136 aa3.61□□□□□ -1.83
HDAC8-212ENST00000421523 TRBV10-1A0A0K0K1A3 114 aa3.6□□□□□ -1.83
HDAC8-212ENST00000421523 B4DEV8 164 aa3.6□□□□□ -1.83
HDAC8-212ENST00000421523 H3BVH4 76 aa3.6□□□□□ -1.83
HDAC8-212ENST00000421523 RHODO00212 210 aa3.6□□□□□ -1.83
HDAC8-212ENST00000421523 PEX7O00628 323 aa3.6□□□□□ -1.83
HDAC8-212ENST00000421523 SH2D1AO60880 128 aa3.6□□□□□ -1.83
HDAC8-212ENST00000421523 LTAP01374 205 aa3.6□□□□□ -1.83
HDAC8-212ENST00000421523 GIPP09681 153 aaPredicted RBP3.6□□□□□ -1.83
HDAC8-212ENST00000421523 S100A4P26447 101 aaKnown RBP3.6□□□□□ -1.83
HDAC8-212ENST00000421523 UBE2D3P61077 147 aa3.6□□□□□ -1.83
HDAC8-212ENST00000421523 UBE2D2P62837 147 aa3.6□□□□□ -1.83
HDAC8-212ENST00000421523 LGALSLQ3ZCW2 172 aaPredicted RBP3.6□□□□□ -1.83
HDAC8-212ENST00000421523 TOR2AQ5JU69 321 aa3.6□□□□□ -1.83
HDAC8-212ENST00000421523 PRR27Q6MZM9 219 aa3.6□□□□□ -1.83
HDAC8-212ENST00000421523 ENHOQ6UWT2 76 aa3.6□□□□□ -1.83
HDAC8-212ENST00000421523 Q8N976 141 aa3.6□□□□□ -1.83
HDAC8-212ENST00000421523 OR10G8Q8NGN5 311 aa3.6□□□□□ -1.83
HDAC8-212ENST00000421523 HIST1H2BAQ96A08 127 aa3.6□□□□□ -1.83
HDAC8-212ENST00000421523 CHCHD7Q9BUK0 85 aa3.6□□□□□ -1.83
HDAC8-212ENST00000421523 NKX6-2Q9C056 277 aaPredicted RBP3.6□□□□□ -1.83
HDAC8-212ENST00000421523 ZFP30Q9Y2G7 519 aa3.6□□□□□ -1.83
HDAC8-212ENST00000421523 COX11Q9Y6N1 276 aa3.6□□□□□ -1.83
HDAC8-212ENST00000421523 TRBV7-3A0A075B6L6 115 aa3.59□□□□□ -1.83
HDAC8-212ENST00000421523 A0A087WWL8 130 aa3.59□□□□□ -1.83
HDAC8-212ENST00000421523 A0A0J9YXV3 536 aa3.59□□□□□ -1.83
HDAC8-212ENST00000421523 GRIFINA4D1Z8 144 aa3.59□□□□□ -1.83
HDAC8-212ENST00000421523 PTTG1O95997 202 aa3.59□□□□□ -1.83
HDAC8-212ENST00000421523 FHITP49789 147 aa3.59□□□□□ -1.83
HDAC8-212ENST00000421523 UBE2G2P60604 165 aa3.59□□□□□ -1.83
HDAC8-212ENST00000421523 FAM162BQ5T6X4 162 aa3.59□□□□□ -1.83
HDAC8-212ENST00000421523 KRTAP26-1Q6PEX3 210 aa3.59□□□□□ -1.83
HDAC8-212ENST00000421523 NTM-AS1Q6ZSK4 140 aa3.59□□□□□ -1.83
HDAC8-212ENST00000421523 FMC1Q96HJ9 113 aa3.59□□□□□ -1.83
HDAC8-212ENST00000421523 MLST8Q9BVC4 326 aa3.59□□□□□ -1.83
HDAC8-212ENST00000421523 SSBP4Q9BWG4 385 aaPredicted RBP3.59□□□□□ -1.83
HDAC8-212ENST00000421523 MED28Q9H204 178 aa3.59□□□□□ -1.83
HDAC8-212ENST00000421523 KLK12Q9UKR0 248 aa3.59□□□□□ -1.83
HDAC8-212ENST00000421523 TRBV6-8A0A0A6YYG3 113 aa3.58□□□□□ -1.84
HDAC8-212ENST00000421523 M0R036 132 aa3.58□□□□□ -1.84
HDAC8-212ENST00000421523 SNAI2O43623 268 aa3.58□□□□□ -1.84
HDAC8-212ENST00000421523 CXCL1P09341 107 aa3.58□□□□□ -1.84
HDAC8-212ENST00000421523 SRSF3P84103 164 aaKnown RBP3.58□□□□□ -1.84
HDAC8-212ENST00000421523 FAM74A4Q5TZK3 123 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms