RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 ETDCA0A1B0GVM5 59 aa9.53□□□□□ -0.88
CLCN4-203ENST00000421085 E7EUB6 86 aa9.53□□□□□ -0.88
CLCN4-203ENST00000421085 SPANXB1Q9NS25 103 aaPredicted RBP9.53□□□□□ -0.88
CLCN4-203ENST00000421085 A0A1B0GXF2 115 aa9.53□□□□□ -0.88
CLCN4-203ENST00000421085 IGLV2-23P01705 113 aa9.53□□□□□ -0.88
CLCN4-203ENST00000421085 CGB3P0DN86 165 aa9.53□□□□□ -0.88
CLCN4-203ENST00000421085 RPL18AQ02543 176 aaKnown RBP9.53□□□□□ -0.88
CLCN4-203ENST00000421085 AJUBAQ96IF1 538 aa9.53□□□□□ -0.88
CLCN4-203ENST00000421085 COX7A2LO14548 114 aa9.52□□□□□ -0.88
CLCN4-203ENST00000421085 GDF5OSQ5U4N7 250 aa9.52□□□□□ -0.88
CLCN4-203ENST00000421085 ATP5G1P05496 136 aa9.52□□□□□ -0.89
CLCN4-203ENST00000421085 Q96MF0 132 aa9.52□□□□□ -0.89
CLCN4-203ENST00000421085 IGHV1-58A0A0C4DH39 117 aa9.52□□□□□ -0.89
CLCN4-203ENST00000421085 ZNF503Q96F45 646 aa9.52□□□□□ -0.89
CLCN4-203ENST00000421085 C14orf132Q9NPU4 83 aa9.52□□□□□ -0.89
CLCN4-203ENST00000421085 DYSFO75923 2080 aa9.52□□□□□ -0.89
CLCN4-203ENST00000421085 MGAMO43451 1857 aa9.52□□□□□ -0.89
CLCN4-203ENST00000421085 TRBV6-1A0A0K0K1D8 114 aa9.51□□□□□ -0.89
CLCN4-203ENST00000421085 ARHGAP21Q5T5U3 1957 aa9.51□□□□□ -0.89
CLCN4-203ENST00000421085 TEX22C9J3V5 150 aa9.51□□□□□ -0.89
CLCN4-203ENST00000421085 CHKB-CPT1BH3BT56 60 aa9.51□□□□□ -0.89
CLCN4-203ENST00000421085 IGHV4-59P01825 116 aa9.51□□□□□ -0.89
CLCN4-203ENST00000421085 GYPEP15421 78 aa9.51□□□□□ -0.89
CLCN4-203ENST00000421085 CAMK2N2Q96S95 79 aa9.51□□□□□ -0.89
CLCN4-203ENST00000421085 SHANK1Q9Y566 2161 aa9.51□□□□□ -0.89
CLCN4-203ENST00000421085 NFE4Q86UQ8 179 aa9.51□□□□□ -0.89
CLCN4-203ENST00000421085 TICRRQ7Z2Z1 1910 aa9.51□□□□□ -0.89
CLCN4-203ENST00000421085 TEX49A0A1B0GTD5 131 aa9.51□□□□□ -0.89
CLCN4-203ENST00000421085 J3QLI3 93 aa9.51□□□□□ -0.89
CLCN4-203ENST00000421085 NOTCH3Q9UM47 2321 aa9.51□□□□□ -0.89
CLCN4-203ENST00000421085 K7ENP7 123 aa9.51□□□□□ -0.89
CLCN4-203ENST00000421085 IGLV2-8P01709 118 aa9.51□□□□□ -0.89
CLCN4-203ENST00000421085 SP5Q6BEB4 398 aaPredicted RBP9.51□□□□□ -0.89
CLCN4-203ENST00000421085 TRAV23DV6A0A075B6W5 121 aa9.5□□□□□ -0.89
CLCN4-203ENST00000421085 SLURP1P55000 103 aa9.5□□□□□ -0.89
CLCN4-203ENST00000421085 RBX1P62877 108 aa9.5□□□□□ -0.89
CLCN4-203ENST00000421085 MIR7-3HGQ8N6C7 128 aa9.5□□□□□ -0.89
CLCN4-203ENST00000421085 SPTBN2O15020 2390 aa9.5□□□□□ -0.89
CLCN4-203ENST00000421085 IGHV3-30-3P0DP02 117 aa9.5□□□□□ -0.89
CLCN4-203ENST00000421085 LINC00322Q6ZN03 302 aaPredicted RBP9.5□□□□□ -0.89
CLCN4-203ENST00000421085 ODF3L1Q8IXM7 274 aa9.5□□□□□ -0.89
CLCN4-203ENST00000421085 DEFB112Q30KQ8 113 aa9.5□□□□□ -0.89
CLCN4-203ENST00000421085 CACNA1GO43497 2377 aa9.5□□□□□ -0.89
CLCN4-203ENST00000421085 H3BQ85 93 aa9.5□□□□□ -0.89
CLCN4-203ENST00000421085 DEFB1P60022 68 aa9.5□□□□□ -0.89
CLCN4-203ENST00000421085 THSD7BQ9C0I4 1608 aa9.5□□□□□ -0.89
CLCN4-203ENST00000421085 RNF152Q8N8N0 203 aa9.49□□□□□ -0.89
CLCN4-203ENST00000421085 CGB7P0DN87 165 aa9.49□□□□□ -0.89
CLCN4-203ENST00000421085 MED14OSP0DP75 135 aa9.49□□□□□ -0.89
CLCN4-203ENST00000421085 TRBV7-3A0A075B6L6 115 aa9.49□□□□□ -0.89
CLCN4-203ENST00000421085 TMEM256-PLSCR3K7ERE1 68 aa9.49□□□□□ -0.89
CLCN4-203ENST00000421085 SVIPQ8NHG7 77 aa9.49□□□□□ -0.89
CLCN4-203ENST00000421085 C16orf74Q96GX8 76 aa9.49□□□□□ -0.89
CLCN4-203ENST00000421085 SPATA25Q9BR10 227 aa9.48□□□□□ -0.89
CLCN4-203ENST00000421085 MIAQ16674 131 aa9.48□□□□□ -0.89
CLCN4-203ENST00000421085 SPTAN1Q13813 2472 aaKnown RBP9.48□□□□□ -0.89
CLCN4-203ENST00000421085 COL6A6A6NMZ7 2263 aa9.48□□□□□ -0.89
CLCN4-203ENST00000421085 IGKV2D-26A0A0A0MRZ7 120 aa9.48□□□□□ -0.89
CLCN4-203ENST00000421085 UQCRQO14949 82 aa9.48□□□□□ -0.89
CLCN4-203ENST00000421085 IGLC6P0CF74 106 aa9.48□□□□□ -0.89
CLCN4-203ENST00000421085 RNF138Q8WVD3 245 aa9.48□□□□□ -0.89
CLCN4-203ENST00000421085 TNRC6BQ9UPQ9 1833 aaKnown RBP9.48□□□□□ -0.89
CLCN4-203ENST00000421085 VPREB3Q9UKI3 123 aa9.48□□□□□ -0.89
CLCN4-203ENST00000421085 HIGD2BQ4VC39 106 aa9.47□□□□□ -0.89
CLCN4-203ENST00000421085 SDIM1Q6ZPB5 146 aa9.47□□□□□ -0.89
CLCN4-203ENST00000421085 Q8N9W7 124 aa9.47□□□□□ -0.89
CLCN4-203ENST00000421085 CCL24O00175 119 aa9.47□□□□□ -0.89
CLCN4-203ENST00000421085 UPK3BQ9BT76 320 aa9.47□□□□□ -0.89
CLCN4-203ENST00000421085 BLCAPP62952 87 aa9.47□□□□□ -0.89
CLCN4-203ENST00000421085 C20orf203Q8NBC4 194 aa9.47□□□□□ -0.89
CLCN4-203ENST00000421085 CEMP1Q6PRD7 247 aaPredicted RBP9.47□□□□□ -0.89
CLCN4-203ENST00000421085 YPEL4Q96NS1 127 aa9.47□□□□□ -0.89
CLCN4-203ENST00000421085 A0A0J9YXY3 114 aa9.46□□□□□ -0.89
CLCN4-203ENST00000421085 TM2D2Q9BX73 214 aa9.46□□□□□ -0.89
CLCN4-203ENST00000421085 IGHV3-30P01768 117 aa9.46□□□□□ -0.9
CLCN4-203ENST00000421085 IGHV3-33P01772 117 aa9.46□□□□□ -0.9
CLCN4-203ENST00000421085 IGHV3-30-5P0DP03 117 aa9.46□□□□□ -0.9
CLCN4-203ENST00000421085 ZNF80P51504 273 aaPredicted RBP9.46□□□□□ -0.9
CLCN4-203ENST00000421085 IGKV1D-37A0A075B6S9 117 aa9.46□□□□□ -0.9
CLCN4-203ENST00000421085 TP53TG3Q9ULZ0 132 aa9.46□□□□□ -0.9
CLCN4-203ENST00000421085 GRNP28799 593 aaKnown RBP9.46□□□□□ -0.9
CLCN4-203ENST00000421085 MDFICQ9P1T7 246 aa9.46□□□□□ -0.9
CLCN4-203ENST00000421085 NDUFB1O75438 58 aa9.45□□□□□ -0.9
CLCN4-203ENST00000421085 C20orf197Q8N268 126 aa9.45□□□□□ -0.9
CLCN4-203ENST00000421085 MPLKIPQ8TAP9 179 aa9.45□□□□□ -0.9
CLCN4-203ENST00000421085 NACAE9PAV3 2078 aa9.45□□□□□ -0.9
CLCN4-203ENST00000421085 TRBV12-3P01733 135 aa9.45□□□□□ -0.9
CLCN4-203ENST00000421085 OBSL1O75147 1896 aa9.45□□□□□ -0.9
CLCN4-203ENST00000421085 IGHV4-38-2P0DP08 117 aa9.45□□□□□ -0.9
CLCN4-203ENST00000421085 CACNA1BQ00975 2339 aa9.45□□□□□ -0.9
CLCN4-203ENST00000421085 MALRD1Q5VYJ5 2156 aa9.45□□□□□ -0.9
CLCN4-203ENST00000421085 NCKAP5O14513 1909 aa9.45□□□□□ -0.9
CLCN4-203ENST00000421085 C3orf22Q8N5N4 141 aa9.45□□□□□ -0.9
CLCN4-203ENST00000421085 C5orf56Q8N8D9 126 aa9.44□□□□□ -0.9
CLCN4-203ENST00000421085 DIRC1Q969H9 104 aa9.44□□□□□ -0.9
CLCN4-203ENST00000421085 P0C879 139 aa9.44□□□□□ -0.9
CLCN4-203ENST00000421085 ESM1Q9NQ30 184 aa9.44□□□□□ -0.9
CLCN4-203ENST00000421085 ANAPC1Q9H1A4 1944 aa9.44□□□□□ -0.9
CLCN4-203ENST00000421085 PROP1O75360 226 aa9.44□□□□□ -0.9
CLCN4-203ENST00000421085 ACACAQ13085 2346 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms