RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 CD5LO43866 347 aa6.52□□□□□ -1.37
SNCA-206ENST00000420646 NACAE9PAV3 2078 aa6.52□□□□□ -1.37
SNCA-206ENST00000420646 IGHV4-4A0A075B6R2 117 aa6.52□□□□□ -1.37
SNCA-206ENST00000420646 C7orf71A4D174 169 aa6.52□□□□□ -1.37
SNCA-206ENST00000420646 LGALS9O00182 355 aa6.52□□□□□ -1.37
SNCA-206ENST00000420646 PPBPP02775 128 aa6.52□□□□□ -1.37
SNCA-206ENST00000420646 CD300EQ496F6 205 aaPredicted RBP6.52□□□□□ -1.37
SNCA-206ENST00000420646 RAX2Q96IS3 184 aa6.52□□□□□ -1.37
SNCA-206ENST00000420646 CITED2Q99967 270 aaPredicted RBP6.52□□□□□ -1.37
SNCA-206ENST00000420646 ORAOV1Q8WV07 137 aa6.51□□□□□ -1.37
SNCA-206ENST00000420646 TTTY13Q9BZ97 58 aa6.51□□□□□ -1.37
SNCA-206ENST00000420646 SCRT2Q9NQ03 307 aa6.51□□□□□ -1.37
SNCA-206ENST00000420646 RBMY1BA6NDE4 496 aaKnown RBP6.51□□□□□ -1.37
SNCA-206ENST00000420646 RBMY1EA6NEQ0 496 aaKnown RBP6.51□□□□□ -1.37
SNCA-206ENST00000420646 F5H697 171 aa6.51□□□□□ -1.37
SNCA-206ENST00000420646 PRSS1P07477 247 aa6.51□□□□□ -1.37
SNCA-206ENST00000420646 RBMY1DP0C7P1 496 aaKnown RBP6.51□□□□□ -1.37
SNCA-206ENST00000420646 LAMTOR2Q9Y2Q5 125 aa6.51□□□□□ -1.37
SNCA-206ENST00000420646 IGHV3-73A0A0B4J1V6 119 aa6.5□□□□□ -1.37
SNCA-206ENST00000420646 SMIM17P0DL12 118 aa6.5□□□□□ -1.37
SNCA-206ENST00000420646 VPS25Q9BRG1 176 aa6.5□□□□□ -1.37
SNCA-206ENST00000420646 AMTNQ6UX39 209 aa6.5□□□□□ -1.37
SNCA-206ENST00000420646 Q8N8P6 123 aa6.5□□□□□ -1.37
SNCA-206ENST00000420646 C4orf3Q8WVX3 66 aa6.5□□□□□ -1.37
SNCA-206ENST00000420646 DPH3P1Q9H4G8 78 aa6.5□□□□□ -1.37
SNCA-206ENST00000420646 MGAM2Q2M2H8 2515 aa6.5□□□□□ -1.37
SNCA-206ENST00000420646 HSBP1L1C9JCN9 74 aa6.5□□□□□ -1.37
SNCA-206ENST00000420646 K7EP13 123 aa6.5□□□□□ -1.37
SNCA-206ENST00000420646 FCER1GP30273 86 aa6.5□□□□□ -1.37
SNCA-206ENST00000420646 LINC00315P59091 139 aa6.5□□□□□ -1.37
SNCA-206ENST00000420646 LINC01006Q8NI28 216 aa6.5□□□□□ -1.37
SNCA-206ENST00000420646 DYNLRB2Q8TF09 96 aa6.5□□□□□ -1.37
SNCA-206ENST00000420646 NXT2Q9NPJ8 142 aaKnown RBP6.5□□□□□ -1.37
SNCA-206ENST00000420646 NUDT3O95989 172 aa6.49□□□□□ -1.37
SNCA-206ENST00000420646 MPV17L2Q567V2 206 aa6.49□□□□□ -1.37
SNCA-206ENST00000420646 FOXC2Q99958 501 aa6.49□□□□□ -1.37
SNCA-206ENST00000420646 IGHV3-16A0A0C4DH30 117 aa6.49□□□□□ -1.37
SNCA-206ENST00000420646 SUMO2P61956 95 aaKnown RBP6.49□□□□□ -1.37
SNCA-206ENST00000420646 UBE2V1Q13404 147 aa6.49□□□□□ -1.37
SNCA-206ENST00000420646 Q9UF83 564 aa6.49□□□□□ -1.37
SNCA-206ENST00000420646 PROK1P58294 105 aa6.48□□□□□ -1.37
SNCA-206ENST00000420646 LAGE3Q14657 143 aa6.48□□□□□ -1.37
SNCA-206ENST00000420646 DEFB114Q30KQ6 69 aa6.48□□□□□ -1.37
SNCA-206ENST00000420646 ZC2HC1BQ5TFG8 222 aa6.48□□□□□ -1.37
SNCA-206ENST00000420646 PCP2Q8IVA1 136 aa6.48□□□□□ -1.37
SNCA-206ENST00000420646 AP1S3Q96PC3 154 aa6.48□□□□□ -1.37
SNCA-206ENST00000420646 KIF25-AS1Q9Y6Z4 181 aa6.48□□□□□ -1.37
SNCA-206ENST00000420646 TMEM238C9JI98 176 aa6.48□□□□□ -1.37
SNCA-206ENST00000420646 H3BMM0 161 aa6.48□□□□□ -1.37
SNCA-206ENST00000420646 CCL24O00175 119 aa6.48□□□□□ -1.37
SNCA-206ENST00000420646 NMUP48645 174 aa6.48□□□□□ -1.37
SNCA-206ENST00000420646 SUMO4Q6EEV6 95 aa6.48□□□□□ -1.37
SNCA-206ENST00000420646 SMIM2Q9BVW6 85 aa6.48□□□□□ -1.37
SNCA-206ENST00000420646 CSTL1Q9H114 145 aa6.48□□□□□ -1.37
SNCA-206ENST00000420646 IGHV3OR16-12A0A075B7B8 117 aa6.47□□□□□ -1.37
SNCA-206ENST00000420646 IGHV1OR15-1A0A075B7D0 117 aa6.47□□□□□ -1.37
SNCA-206ENST00000420646 ZNF876PQ49A33 203 aa6.47□□□□□ -1.37
SNCA-206ENST00000420646 SLC25A34Q6PIV7 304 aa6.47□□□□□ -1.37
SNCA-206ENST00000420646 FOXI2Q6ZQN5 318 aa6.47□□□□□ -1.37
SNCA-206ENST00000420646 WFDC10AQ9H1F0 79 aa6.47□□□□□ -1.37
SNCA-206ENST00000420646 MAP6D1Q9H9H5 199 aa6.47□□□□□ -1.37
SNCA-206ENST00000420646 ST20Q9HBF5 79 aa6.47□□□□□ -1.37
SNCA-206ENST00000420646 IGKV2D-26A0A0A0MRZ7 120 aa6.47□□□□□ -1.37
SNCA-206ENST00000420646 P0DMU3 169 aa6.47□□□□□ -1.37
SNCA-206ENST00000420646 FAM231AP0DMU4 169 aa6.47□□□□□ -1.37
SNCA-206ENST00000420646 FAM231CP0DMU5 169 aa6.47□□□□□ -1.37
SNCA-206ENST00000420646 ODF1Q14990 250 aa6.47□□□□□ -1.37
SNCA-206ENST00000420646 NSUN5P1Q3KNT7 163 aa6.47□□□□□ -1.37
SNCA-206ENST00000420646 SVIPQ8NHG7 77 aa6.47□□□□□ -1.37
SNCA-206ENST00000420646 TMEM160Q9NX00 188 aa6.47□□□□□ -1.37
SNCA-206ENST00000420646 PEMTQ9UBM1 199 aa6.47□□□□□ -1.37
SNCA-206ENST00000420646 COX11Q9Y6N1 276 aa6.47□□□□□ -1.37
SNCA-206ENST00000420646 TRBV7-9A0A0J9YWB2 115 aa6.47□□□□□ -1.37
SNCA-206ENST00000420646 MRAP2Q96G30 205 aa6.47□□□□□ -1.37
SNCA-206ENST00000420646 XCL2Q9UBD3 114 aa6.47□□□□□ -1.37
SNCA-206ENST00000420646 ZNF256Q9Y2P7 627 aaPredicted RBP6.47□□□□□ -1.37
SNCA-206ENST00000420646 EMP1P54849 157 aa6.46□□□□□ -1.37
SNCA-206ENST00000420646 ZNF56Q15929 161 aa6.46□□□□□ -1.37
SNCA-206ENST00000420646 LGALS9BQ3B8N2 356 aa6.46□□□□□ -1.37
SNCA-206ENST00000420646 LGALS9CQ6DKI2 356 aa6.46□□□□□ -1.37
SNCA-206ENST00000420646 GTSCR1Q86UQ5 136 aa6.46□□□□□ -1.37
SNCA-206ENST00000420646 OR4C5Q8NGB2 326 aa6.46□□□□□ -1.37
SNCA-206ENST00000420646 MRPL35Q9NZE8 188 aaKnown RBP6.46□□□□□ -1.37
SNCA-206ENST00000420646 RPL39P62891 51 aaKnown RBP6.46□□□□□ -1.38
SNCA-206ENST00000420646 LINC01546A6NGU7 62 aa6.45□□□□□ -1.38
SNCA-206ENST00000420646 HLA-DRB4P13762 266 aa6.45□□□□□ -1.38
SNCA-206ENST00000420646 ODF3L2Q3SX64 289 aa6.45□□□□□ -1.38
SNCA-206ENST00000420646 TMEM86BQ8N661 226 aa6.45□□□□□ -1.38
SNCA-206ENST00000420646 CLUHP3Q96NS8 147 aa6.45□□□□□ -1.38
SNCA-206ENST00000420646 HHLA3Q9XRX5 114 aa6.45□□□□□ -1.38
SNCA-206ENST00000420646 CHTOPQ9Y3Y2 248 aaKnown RBP6.45□□□□□ -1.38
SNCA-206ENST00000420646 HLA-DRB4X5D2U9 266 aa6.45□□□□□ -1.38
SNCA-206ENST00000420646 DUSP14O95147 198 aaKnown RBP6.45□□□□□ -1.38
SNCA-206ENST00000420646 CRYGDP07320 174 aa6.45□□□□□ -1.38
SNCA-206ENST00000420646 SAMD13Q5VXD3 122 aa6.45□□□□□ -1.38
SNCA-206ENST00000420646 C9orf85Q96MD7 179 aa6.45□□□□□ -1.38
SNCA-206ENST00000420646 MRPS16Q9Y3D3 137 aaKnown RBP6.45□□□□□ -1.38
SNCA-206ENST00000420646 LY6G6DO95868 133 aa6.45□□□□□ -1.38
SNCA-206ENST00000420646 RIPPLY3P57055 190 aa6.45□□□□□ -1.38
SNCA-206ENST00000420646 MORN3Q6PF18 240 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms