RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 ARL6IP6Q8N6S5 226 aa8.39□□□□□ -1.07
LINC00339-203ENST00000420503 MBD3L1Q8WWY6 194 aa8.39□□□□□ -1.07
LINC00339-203ENST00000420503 KCNS1Q96KK3 526 aa8.39□□□□□ -1.07
LINC00339-203ENST00000420503 MAP1LC3BQ9GZQ8 125 aa8.39□□□□□ -1.07
LINC00339-203ENST00000420503 GGTLC3B5MD39 225 aa8.38□□□□□ -1.07
LINC00339-203ENST00000420503 SYT8Q8NBV8 401 aa8.38□□□□□ -1.07
LINC00339-203ENST00000420503 IGKV2D-24A0A075B6R9 120 aa8.37□□□□□ -1.07
LINC00339-203ENST00000420503 TRAV8-3A0A0A6YYJ7 113 aa8.37□□□□□ -1.07
LINC00339-203ENST00000420503 IGKV3D-20A0A0C4DH25 116 aa8.37□□□□□ -1.07
LINC00339-203ENST00000420503 A0A1W2PRE2 83 aa8.37□□□□□ -1.07
LINC00339-203ENST00000420503 TCRAP04437 139 aa8.37□□□□□ -1.07
LINC00339-203ENST00000420503 MGST1P10620 155 aaKnown RBP8.37□□□□□ -1.07
LINC00339-203ENST00000420503 SULT1A2P50226 295 aa8.37□□□□□ -1.07
LINC00339-203ENST00000420503 FAM74A1Q5RGS3 127 aa8.37□□□□□ -1.07
LINC00339-203ENST00000420503 EIF5AL1Q6IS14 154 aaKnown RBP8.37□□□□□ -1.07
LINC00339-203ENST00000420503 UFSP1Q6NVU6 142 aa8.37□□□□□ -1.07
LINC00339-203ENST00000420503 FAM213BQ8TBF2 198 aa8.37□□□□□ -1.07
LINC00339-203ENST00000420503 DAZAP1Q96EP5 407 aaKnown RBP8.37□□□□□ -1.07
LINC00339-203ENST00000420503 KLK12Q9UKR0 248 aa8.37□□□□□ -1.07
LINC00339-203ENST00000420503 PSG8Q9UQ74 426 aa8.37□□□□□ -1.07
LINC00339-203ENST00000420503 RAB5CP51148 216 aa8.36□□□□□ -1.07
LINC00339-203ENST00000420503 PRNTQ86SH4 94 aa8.36□□□□□ -1.07
LINC00339-203ENST00000420503 NIT1Q86X76 327 aa8.36□□□□□ -1.07
LINC00339-203ENST00000420503 LINC00479Q96M42 142 aa8.36□□□□□ -1.07
LINC00339-203ENST00000420503 TRAV34A0A0B4J273 112 aa8.35□□□□□ -1.07
LINC00339-203ENST00000420503 FAM74A7A6NL05 159 aa8.35□□□□□ -1.07
LINC00339-203ENST00000420503 OXTP01178 125 aa8.35□□□□□ -1.07
LINC00339-203ENST00000420503 SUMO1P63165 101 aaKnown RBP8.35□□□□□ -1.07
LINC00339-203ENST00000420503 CYB561D1Q8N8Q1 229 aa8.35□□□□□ -1.07
LINC00339-203ENST00000420503 C5orf17Q8NAS9 161 aa8.35□□□□□ -1.07
LINC00339-203ENST00000420503 SFT2D1Q8WV19 159 aa8.35□□□□□ -1.07
LINC00339-203ENST00000420503 UBE2WQ96B02 151 aa8.35□□□□□ -1.07
LINC00339-203ENST00000420503 TRAV1-1A0A0B4J248 108 aa8.34□□□□□ -1.07
LINC00339-203ENST00000420503 PANO1I0J062 215 aa8.34□□□□□ -1.07
LINC00339-203ENST00000420503 H2AFB1P0C5Y9 115 aa8.34□□□□□ -1.07
LINC00339-203ENST00000420503 UBE2G2P60604 165 aa8.34□□□□□ -1.07
LINC00339-203ENST00000420503 DMRTA1Q5VZB9 504 aa8.34□□□□□ -1.07
LINC00339-203ENST00000420503 PTH2Q96A98 100 aa8.34□□□□□ -1.07
LINC00339-203ENST00000420503 NDFIP1Q9BT67 221 aa8.34□□□□□ -1.07
LINC00339-203ENST00000420503 EPDR1Q9UM22 224 aa8.34□□□□□ -1.07
LINC00339-203ENST00000420503 ARL2-SNX15V9GYD0 113 aa8.34□□□□□ -1.07
LINC00339-203ENST00000420503 SERTM2A0A1B0GWG4 89 aa8.33□□□□□ -1.08
LINC00339-203ENST00000420503 H3BVH4 76 aa8.33□□□□□ -1.08
LINC00339-203ENST00000420503 MT1HL1P0DM35 61 aa8.33□□□□□ -1.08
LINC00339-203ENST00000420503 FLI1Q01543 452 aaPredicted RBP8.33□□□□□ -1.08
LINC00339-203ENST00000420503 Q8N976 141 aa8.33□□□□□ -1.08
LINC00339-203ENST00000420503 NKX6-2Q9C056 277 aaPredicted RBP8.33□□□□□ -1.08
LINC00339-203ENST00000420503 A0A087WWL8 130 aa8.32□□□□□ -1.08
LINC00339-203ENST00000420503 A0A1B0GV50 99 aa8.32□□□□□ -1.08
LINC00339-203ENST00000420503 CIDEAO60543 219 aa8.32□□□□□ -1.08
LINC00339-203ENST00000420503 RPL37AP61513 92 aaKnown RBP8.32□□□□□ -1.08
LINC00339-203ENST00000420503 CCL20P78556 96 aa8.32□□□□□ -1.08
LINC00339-203ENST00000420503 SMUG1Q53HV7 270 aa8.32□□□□□ -1.08
LINC00339-203ENST00000420503 TOR2AQ5JU69 321 aa8.32□□□□□ -1.08
LINC00339-203ENST00000420503 FAM74A4Q5TZK3 123 aa8.32□□□□□ -1.08
LINC00339-203ENST00000420503 ALKAL2Q6UX46 152 aa8.32□□□□□ -1.08
LINC00339-203ENST00000420503 ZFP2Q6ZN57 461 aa8.32□□□□□ -1.08
LINC00339-203ENST00000420503 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.32□□□□□ -1.08
LINC00339-203ENST00000420503 GRIFINA4D1Z8 144 aa8.31□□□□□ -1.08
LINC00339-203ENST00000420503 PAGE4O60829 102 aa8.31□□□□□ -1.08
LINC00339-203ENST00000420503 CRIP1P50238 77 aa8.31□□□□□ -1.08
LINC00339-203ENST00000420503 LRP2P98164 4655 aa8.31□□□□□ -1.08
LINC00339-203ENST00000420503 A8MWV9 139 aa8.3□□□□□ -1.08
LINC00339-203ENST00000420503 M0R036 132 aa8.3□□□□□ -1.08
LINC00339-203ENST00000420503 PEX7O00628 323 aa8.3□□□□□ -1.08
LINC00339-203ENST00000420503 S100A4P26447 101 aaKnown RBP8.3□□□□□ -1.08
LINC00339-203ENST00000420503 ODF1Q14990 250 aa8.3□□□□□ -1.08
LINC00339-203ENST00000420503 ATRAIDQ6UW56 229 aa8.3□□□□□ -1.08
LINC00339-203ENST00000420503 ENHOQ6UWT2 76 aa8.3□□□□□ -1.08
LINC00339-203ENST00000420503 HIST1H2BAQ96A08 127 aa8.3□□□□□ -1.08
LINC00339-203ENST00000420503 TCEAL7Q9BRU2 100 aa8.3□□□□□ -1.08
LINC00339-203ENST00000420503 RNF213Q63HN8 5207 aa8.3□□□□□ -1.08
LINC00339-203ENST00000420503 A0A087WWC5 75 aa8.29□□□□□ -1.08
LINC00339-203ENST00000420503 K7EQM0 130 aa8.29□□□□□ -1.08
LINC00339-203ENST00000420503 IFNA7P01567 189 aa8.29□□□□□ -1.08
LINC00339-203ENST00000420503 ASIPP42127 132 aa8.29□□□□□ -1.08
LINC00339-203ENST00000420503 LYPD6BQ8NI32 183 aa8.29□□□□□ -1.08
LINC00339-203ENST00000420503 RMI2Q96E14 147 aa8.29□□□□□ -1.08
LINC00339-203ENST00000420503 COX11Q9Y6N1 276 aa8.29□□□□□ -1.08
LINC00339-203ENST00000420503 URGCP-MRPS24S4R325 110 aa8.29□□□□□ -1.08
LINC00339-203ENST00000420503 TNXBP22105 4242 aa8.28□□□□□ -1.08
LINC00339-203ENST00000420503 TMSB15BA0A087X1C1 80 aa8.28□□□□□ -1.08
LINC00339-203ENST00000420503 USP17L23D6RBM5 183 aa8.28□□□□□ -1.08
LINC00339-203ENST00000420503 TEX46H3BTG2 121 aa8.28□□□□□ -1.08
LINC00339-203ENST00000420503 PRSS1P07477 247 aa8.28□□□□□ -1.08
LINC00339-203ENST00000420503 ARMS2P0C7Q2 107 aa8.28□□□□□ -1.08
LINC00339-203ENST00000420503 MPV17L2Q567V2 206 aa8.28□□□□□ -1.08
LINC00339-203ENST00000420503 CST9LP1Q5W188 147 aa8.28□□□□□ -1.08
LINC00339-203ENST00000420503 Q86TA4 180 aa8.28□□□□□ -1.08
LINC00339-203ENST00000420503 C15orf54Q8N8G6 183 aa8.28□□□□□ -1.08
LINC00339-203ENST00000420503 ZC2HC1AQ96GY0 325 aa8.28□□□□□ -1.08
LINC00339-203ENST00000420503 MANBALQ9NQG1 85 aa8.28□□□□□ -1.08
LINC00339-203ENST00000420503 A0A087WX48 190 aa8.27□□□□□ -1.09
LINC00339-203ENST00000420503 B4DEV8 164 aa8.27□□□□□ -1.09
LINC00339-203ENST00000420503 HLA-DQA1P01909 254 aa8.27□□□□□ -1.09
LINC00339-203ENST00000420503 CLPSL2Q6UWE3 100 aa8.27□□□□□ -1.09
LINC00339-203ENST00000420503 IL36BQ9NZH7 164 aa8.27□□□□□ -1.09
LINC00339-203ENST00000420503 GNG13Q9P2W3 67 aa8.27□□□□□ -1.09
LINC00339-203ENST00000420503 TRBV6-1A0A0K0K1D8 114 aa8.26□□□□□ -1.09
LINC00339-203ENST00000420503 SCO2A0A1W2PP80 73 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms