RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 RNASE13Q5GAN3 156 aaKnown RBP6.51□□□□□ -1.37
UBR4-206ENST00000419533 BVES-AS1Q5T3Y7 98 aa6.51□□□□□ -1.37
UBR4-206ENST00000419533 C9orf47Q6ZRZ4 202 aa6.51□□□□□ -1.37
UBR4-206ENST00000419533 PSMG3-AS1Q96PY0 264 aa6.51□□□□□ -1.37
UBR4-206ENST00000419533 SUMO4Q6EEV6 95 aa6.5□□□□□ -1.37
UBR4-206ENST00000419533 C9JAW5 83 aa6.5□□□□□ -1.37
UBR4-206ENST00000419533 IGHV3-30P01768 117 aa6.5□□□□□ -1.37
UBR4-206ENST00000419533 IGHV3-33P01772 117 aa6.5□□□□□ -1.37
UBR4-206ENST00000419533 IGHV3-30-3P0DP02 117 aa6.5□□□□□ -1.37
UBR4-206ENST00000419533 IGHV3-30-5P0DP03 117 aa6.5□□□□□ -1.37
UBR4-206ENST00000419533 HERV-K104P63124 156 aa6.5□□□□□ -1.37
UBR4-206ENST00000419533 CAMK2N2Q96S95 79 aa6.5□□□□□ -1.37
UBR4-206ENST00000419533 K7EN84 100 aa6.5□□□□□ -1.37
UBR4-206ENST00000419533 LY6G6DO95868 133 aa6.5□□□□□ -1.37
UBR4-206ENST00000419533 HHLA3Q9XRX5 114 aa6.5□□□□□ -1.37
UBR4-206ENST00000419533 RPL18AQ02543 176 aaKnown RBP6.5□□□□□ -1.37
UBR4-206ENST00000419533 CADP27708 2225 aa6.5□□□□□ -1.37
UBR4-206ENST00000419533 F8W1H4 67 aa6.5□□□□□ -1.37
UBR4-206ENST00000419533 PATE2Q6UY27 113 aa6.5□□□□□ -1.37
UBR4-206ENST00000419533 LYPD6Q86Y78 171 aa6.5□□□□□ -1.37
UBR4-206ENST00000419533 DOCK11Q5JSL3 2073 aa6.49□□□□□ -1.37
UBR4-206ENST00000419533 TRBV20-1A0A075B6N2 111 aa6.49□□□□□ -1.37
UBR4-206ENST00000419533 SHISA2Q6UWI4 295 aa6.49□□□□□ -1.37
UBR4-206ENST00000419533 INAFM1C9JVW0 142 aa6.49□□□□□ -1.37
UBR4-206ENST00000419533 COX7A2LO14548 114 aa6.49□□□□□ -1.37
UBR4-206ENST00000419533 CCL25O15444 150 aa6.49□□□□□ -1.37
UBR4-206ENST00000419533 IGHG4P01861 327 aa6.49□□□□□ -1.37
UBR4-206ENST00000419533 MED14OSP0DP75 135 aa6.49□□□□□ -1.37
UBR4-206ENST00000419533 PLA2G2EQ9NZK7 142 aa6.49□□□□□ -1.37
UBR4-206ENST00000419533 A0A1W2PPM0 123 aa6.49□□□□□ -1.37
UBR4-206ENST00000419533 C11orf71Q6IPW1 123 aa6.49□□□□□ -1.37
UBR4-206ENST00000419533 Q8N1Y9 231 aa6.49□□□□□ -1.37
UBR4-206ENST00000419533 ZNF503Q96F45 646 aa6.49□□□□□ -1.37
UBR4-206ENST00000419533 NCKAP5O14513 1909 aa6.48□□□□□ -1.37
UBR4-206ENST00000419533 TIRAPP58753 221 aa6.48□□□□□ -1.37
UBR4-206ENST00000419533 AMTNQ6UX39 209 aa6.48□□□□□ -1.37
UBR4-206ENST00000419533 SPRY2O43597 315 aa6.48□□□□□ -1.37
UBR4-206ENST00000419533 ETDBQ3ZM63 59 aa6.48□□□□□ -1.37
UBR4-206ENST00000419533 BOD1L2Q8IYS8 172 aa6.48□□□□□ -1.37
UBR4-206ENST00000419533 TMEM61Q8N0U2 210 aa6.48□□□□□ -1.37
UBR4-206ENST00000419533 SPTBN4Q9H254 2564 aa6.48□□□□□ -1.37
UBR4-206ENST00000419533 LINC00574Q9H8X3 128 aa6.48□□□□□ -1.37
UBR4-206ENST00000419533 ASPHD1Q5U4P2 390 aa6.47□□□□□ -1.37
UBR4-206ENST00000419533 C5orf38Q86SI9 138 aa6.47□□□□□ -1.37
UBR4-206ENST00000419533 DEFB125Q8N687 156 aa6.47□□□□□ -1.37
UBR4-206ENST00000419533 TMEM263Q8WUH6 116 aaKnown RBP6.47□□□□□ -1.37
UBR4-206ENST00000419533 TRBV7-3A0A075B6L6 115 aa6.47□□□□□ -1.37
UBR4-206ENST00000419533 GAGE12HA6NDE8 117 aa6.47□□□□□ -1.37
UBR4-206ENST00000419533 DSCR8Q96T75 97 aa6.47□□□□□ -1.37
UBR4-206ENST00000419533 MRPL36Q9P0J6 103 aaKnown RBP6.47□□□□□ -1.37
UBR4-206ENST00000419533 Q9H8V8 135 aa6.47□□□□□ -1.37
UBR4-206ENST00000419533 ESM1Q9NQ30 184 aa6.47□□□□□ -1.37
UBR4-206ENST00000419533 PPDPFLQ8WWR9 84 aa6.47□□□□□ -1.37
UBR4-206ENST00000419533 MAP6D1Q9H9H5 199 aa6.47□□□□□ -1.37
UBR4-206ENST00000419533 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.47□□□□□ -1.378e-7■■■■□ 26.1
UBR4-206ENST00000419533 CEP350Q5VT06 3117 aa6.47□□□□□ -1.37
UBR4-206ENST00000419533 ETDCA0A1B0GVM5 59 aa6.47□□□□□ -1.37
UBR4-206ENST00000419533 SIVA1O15304 175 aa6.47□□□□□ -1.37
UBR4-206ENST00000419533 IGF1P05019 195 aa6.47□□□□□ -1.37
UBR4-206ENST00000419533 A0A0J9YX75 114 aa6.46□□□□□ -1.37
UBR4-206ENST00000419533 LGALS9O00182 355 aa6.46□□□□□ -1.37
UBR4-206ENST00000419533 PRO1854Q9UHT4 67 aa6.46□□□□□ -1.37
UBR4-206ENST00000419533 PRSS47A8MTI9 375 aa6.46□□□□□ -1.38
UBR4-206ENST00000419533 IGLL5B9A064 214 aa6.46□□□□□ -1.38
UBR4-206ENST00000419533 MORN5Q5VZ52 161 aa6.46□□□□□ -1.38
UBR4-206ENST00000419533 FANCD2OSQ96PS1 177 aa6.46□□□□□ -1.38
UBR4-206ENST00000419533 IGLV10-54A0A075B6I4 117 aa6.46□□□□□ -1.38
UBR4-206ENST00000419533 PRAC2D3DTV9 90 aa6.46□□□□□ -1.38
UBR4-206ENST00000419533 TRBV12-3P01733 135 aa6.46□□□□□ -1.38
UBR4-206ENST00000419533 UNQ9165/PRO28630Q6UXU0 137 aa6.46□□□□□ -1.38
UBR4-206ENST00000419533 C11orf45Q8TAV5 145 aa6.46□□□□□ -1.38
UBR4-206ENST00000419533 RPL39LQ96EH5 51 aaKnown RBP6.46□□□□□ -1.38
UBR4-206ENST00000419533 UBL5Q9BZL1 73 aa6.46□□□□□ -1.38
UBR4-206ENST00000419533 IGLV2-14P01704 120 aa6.46□□□□□ -1.38
UBR4-206ENST00000419533 FGF6P10767 208 aa6.46□□□□□ -1.38
UBR4-206ENST00000419533 ZFP2Q6ZN57 461 aa6.46□□□□□ -1.38
UBR4-206ENST00000419533 Q6ZVH6 145 aa6.46□□□□□ -1.38
UBR4-206ENST00000419533 RNASE8Q8TDE3 154 aaKnown RBP6.46□□□□□ -1.38
UBR4-206ENST00000419533 DEFB4AO15263 64 aa6.45□□□□□ -1.38
UBR4-206ENST00000419533 ZNF295-AS1Q8N0V1 137 aa6.45□□□□□ -1.38
UBR4-206ENST00000419533 FAM167A-AS1Q96KT0 104 aa6.45□□□□□ -1.38
UBR4-206ENST00000419533 PRO0255Q9UI72 69 aa6.45□□□□□ -1.38
UBR4-206ENST00000419533 NDUFA1O15239 70 aa6.45□□□□□ -1.38
UBR4-206ENST00000419533 CDSNQ15517 529 aa6.45□□□□□ -1.38
UBR4-206ENST00000419533 TRAV4A0A0B4J268 109 aa6.45□□□□□ -1.38
UBR4-206ENST00000419533 NUPR1O60356 82 aa6.45□□□□□ -1.38
UBR4-206ENST00000419533 UTF1Q5T230 341 aa6.45□□□□□ -1.38
UBR4-206ENST00000419533 CEND1Q8N111 149 aa6.45□□□□□ -1.38
UBR4-206ENST00000419533 TRBV6-1A0A0K0K1D8 114 aa6.44□□□□□ -1.38
UBR4-206ENST00000419533 E7EUB6 86 aa6.44□□□□□ -1.38
UBR4-206ENST00000419533 DKK2Q9UBU2 259 aa6.44□□□□□ -1.38
UBR4-206ENST00000419533 GATA1P15976 413 aaPredicted RBP6.44□□□□□ -1.38
UBR4-206ENST00000419533 TDRG1Q3Y452 100 aa6.44□□□□□ -1.38
UBR4-206ENST00000419533 CCDC140Q96MF4 163 aa6.44□□□□□ -1.38
UBR4-206ENST00000419533 SMIM9A6NGZ8 99 aa6.44□□□□□ -1.38
UBR4-206ENST00000419533 HILS1P60008 231 aa6.44□□□□□ -1.38
UBR4-206ENST00000419533 ZNF747Q9BV97 191 aa6.44□□□□□ -1.38
UBR4-206ENST00000419533 COX7B2Q8TF08 81 aa6.44□□□□□ -1.38
UBR4-206ENST00000419533 SPATA25Q9BR10 227 aa6.44□□□□□ -1.38
UBR4-206ENST00000419533 CXCL5P42830 114 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms