RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 ARL2-SNX15V9GYD0 113 aa4.78□□□□□ -1.64
HMGN1-205ENST00000419378 A0A096LPF7 62 aa4.77□□□□□ -1.65
HMGN1-205ENST00000419378 M0R2P5 195 aa4.77□□□□□ -1.65
HMGN1-205ENST00000419378 RTL8CO15255 209 aa4.77□□□□□ -1.65
HMGN1-205ENST00000419378 TPT1P13693 172 aaKnown RBP4.77□□□□□ -1.65
HMGN1-205ENST00000419378 PPT1P50897 306 aa4.77□□□□□ -1.65
HMGN1-205ENST00000419378 EIF5AP63241 154 aaKnown RBP4.77□□□□□ -1.65
HMGN1-205ENST00000419378 DPPA3Q6W0C5 159 aa4.77□□□□□ -1.65
HMGN1-205ENST00000419378 LINC00336Q6ZUF6 198 aa4.77□□□□□ -1.65
HMGN1-205ENST00000419378 TMUB2Q71RG4 321 aa4.77□□□□□ -1.65
HMGN1-205ENST00000419378 TCTE3Q8IZS6 198 aa4.77□□□□□ -1.65
HMGN1-205ENST00000419378 SFT2D1Q8WV19 159 aa4.77□□□□□ -1.65
HMGN1-205ENST00000419378 MBD3L1Q8WWY6 194 aa4.77□□□□□ -1.65
HMGN1-205ENST00000419378 HIST1H2BAQ96A08 127 aa4.77□□□□□ -1.65
HMGN1-205ENST00000419378 PRO0255Q9UI72 69 aa4.77□□□□□ -1.65
HMGN1-205ENST00000419378 IGKV2D-30A0A075B6S6 120 aa4.76□□□□□ -1.65
HMGN1-205ENST00000419378 TRAV4A0A0B4J268 109 aa4.76□□□□□ -1.65
HMGN1-205ENST00000419378 TRGV4A0A0C4DH28 118 aa4.76□□□□□ -1.65
HMGN1-205ENST00000419378 NBDYA0A0U1RRE5 68 aa4.76□□□□□ -1.65
HMGN1-205ENST00000419378 A0A1B0GV50 99 aa4.76□□□□□ -1.65
HMGN1-205ENST00000419378 SFTA3P0C7M3 94 aa4.76□□□□□ -1.65
HMGN1-205ENST00000419378 CRYBA4P53673 196 aa4.76□□□□□ -1.65
HMGN1-205ENST00000419378 ESRGQ1W209 222 aa4.76□□□□□ -1.65
HMGN1-205ENST00000419378 CST9LP1Q5W188 147 aa4.76□□□□□ -1.65
HMGN1-205ENST00000419378 FMC1Q96HJ9 113 aa4.76□□□□□ -1.65
HMGN1-205ENST00000419378 TCEAL7Q9BRU2 100 aa4.76□□□□□ -1.65
HMGN1-205ENST00000419378 UPK3BQ9BT76 320 aa4.76□□□□□ -1.65
HMGN1-205ENST00000419378 HHLA3Q9XRX5 114 aa4.76□□□□□ -1.65
HMGN1-205ENST00000419378 MRPS16Q9Y3D3 137 aaKnown RBP4.76□□□□□ -1.65
HMGN1-205ENST00000419378 ICOSQ9Y6W8 199 aa4.76□□□□□ -1.65
HMGN1-205ENST00000419378 KIAA1109Q2LD37 5005 aa4.75□□□□□ -1.65
HMGN1-205ENST00000419378 TRBV6-1A0A0K0K1D8 114 aa4.75□□□□□ -1.65
HMGN1-205ENST00000419378 C9JCJ5 164 aa4.75□□□□□ -1.65
HMGN1-205ENST00000419378 C1QBP02746 253 aa4.75□□□□□ -1.65
HMGN1-205ENST00000419378 UBE2G1P62253 170 aa4.75□□□□□ -1.65
HMGN1-205ENST00000419378 SLAQ13239 276 aa4.75□□□□□ -1.65
HMGN1-205ENST00000419378 LGALSLQ3ZCW2 172 aaPredicted RBP4.75□□□□□ -1.65
HMGN1-205ENST00000419378 SOHLH1Q5JUK2 328 aa4.75□□□□□ -1.65
HMGN1-205ENST00000419378 C1orf134Q5TEV5 83 aa4.75□□□□□ -1.65
HMGN1-205ENST00000419378 COX8CQ7Z4L0 72 aa4.75□□□□□ -1.65
HMGN1-205ENST00000419378 OR4C5Q8NGB2 326 aa4.75□□□□□ -1.65
HMGN1-205ENST00000419378 ZC2HC1AQ96GY0 325 aa4.75□□□□□ -1.65
HMGN1-205ENST00000419378 C9orf85Q96MD7 179 aa4.75□□□□□ -1.65
HMGN1-205ENST00000419378 Q9H8V8 135 aa4.75□□□□□ -1.65
HMGN1-205ENST00000419378 IGKV3D-20A0A0C4DH25 116 aa4.74□□□□□ -1.65
HMGN1-205ENST00000419378 A0A1B0GVY2 172 aa4.74□□□□□ -1.65
HMGN1-205ENST00000419378 FABP5P3A8MUU1 101 aa4.74□□□□□ -1.65
HMGN1-205ENST00000419378 K7EQD1 137 aa4.74□□□□□ -1.65
HMGN1-205ENST00000419378 LTAP01374 205 aa4.74□□□□□ -1.65
HMGN1-205ENST00000419378 RNASE3P12724 160 aaKnown RBP4.74□□□□□ -1.65
HMGN1-205ENST00000419378 SRIP30626 198 aa4.74□□□□□ -1.65
HMGN1-205ENST00000419378 ASIPP42127 132 aa4.74□□□□□ -1.65
HMGN1-205ENST00000419378 AKR1C3P42330 323 aa4.74□□□□□ -1.65
HMGN1-205ENST00000419378 CRIP1P50238 77 aa4.74□□□□□ -1.65
HMGN1-205ENST00000419378 RPL24P83731 157 aaKnown RBP4.74□□□□□ -1.65
HMGN1-205ENST00000419378 PNRC1Q12796 327 aaPredicted RBP4.74□□□□□ -1.65
HMGN1-205ENST00000419378 ZNF876PQ49A33 203 aa4.74□□□□□ -1.65
HMGN1-205ENST00000419378 EIF5AL1Q6IS14 154 aaKnown RBP4.74□□□□□ -1.65
HMGN1-205ENST00000419378 AKAP14Q86UN6 197 aa4.74□□□□□ -1.65
HMGN1-205ENST00000419378 KRTAP1-5Q9BYS1 174 aa4.74□□□□□ -1.65
HMGN1-205ENST00000419378 ZFP30Q9Y2G7 519 aa4.74□□□□□ -1.65
HMGN1-205ENST00000419378 LRP1BQ9NZR2 4599 aa4.74□□□□□ -1.65
HMGN1-205ENST00000419378 DNAH5Q8TE73 4624 aa4.74□□□□□ -1.65
HMGN1-205ENST00000419378 KRBOX1C9JBD0 128 aa4.73□□□□□ -1.65
HMGN1-205ENST00000419378 M0R036 132 aa4.73□□□□□ -1.65
HMGN1-205ENST00000419378 RS1O15537 224 aa4.73□□□□□ -1.65
HMGN1-205ENST00000419378 SH2D1AO60880 128 aa4.73□□□□□ -1.65
HMGN1-205ENST00000419378 NXPH4O95158 308 aa4.73□□□□□ -1.65
HMGN1-205ENST00000419378 ORM1P02763 201 aa4.73□□□□□ -1.65
HMGN1-205ENST00000419378 GATA1P15976 413 aaPredicted RBP4.73□□□□□ -1.65
HMGN1-205ENST00000419378 S100A4P26447 101 aaKnown RBP4.73□□□□□ -1.65
HMGN1-205ENST00000419378 RAB5CP51148 216 aa4.73□□□□□ -1.65
HMGN1-205ENST00000419378 CCL20P78556 96 aa4.73□□□□□ -1.65
HMGN1-205ENST00000419378 MRPL23Q16540 153 aaKnown RBP4.73□□□□□ -1.65
HMGN1-205ENST00000419378 ZNF674Q2M3X9 581 aa4.73□□□□□ -1.65
HMGN1-205ENST00000419378 TTC32Q5I0X7 151 aa4.73□□□□□ -1.65
HMGN1-205ENST00000419378 ZNF506Q5JVG8 444 aa4.73□□□□□ -1.65
HMGN1-205ENST00000419378 FAM162BQ5T6X4 162 aa4.73□□□□□ -1.65
HMGN1-205ENST00000419378 CFAP126Q5VTH2 177 aa4.73□□□□□ -1.65
HMGN1-205ENST00000419378 NEGR1Q7Z3B1 354 aa4.73□□□□□ -1.65
HMGN1-205ENST00000419378 C6orf223Q8N319 242 aa4.73□□□□□ -1.65
HMGN1-205ENST00000419378 C9orf62Q8N4C0 152 aa4.73□□□□□ -1.65
HMGN1-205ENST00000419378 NHLRC2Q8NBF2 726 aa4.73□□□□□ -1.65
HMGN1-205ENST00000419378 PCNPQ8WW12 178 aaKnown RBP4.73□□□□□ -1.65
HMGN1-205ENST00000419378 PTH2Q96A98 100 aa4.73□□□□□ -1.65
HMGN1-205ENST00000419378 MANBALQ9NQG1 85 aa4.73□□□□□ -1.65
HMGN1-205ENST00000419378 IL36BQ9NZH7 164 aa4.73□□□□□ -1.65
HMGN1-205ENST00000419378 TRAV1-1A0A0B4J248 108 aa4.72□□□□□ -1.65
HMGN1-205ENST00000419378 LOC100131303A0A0U1RQF7 123 aa4.72□□□□□ -1.65
HMGN1-205ENST00000419378 A0A1W2PPQ1 181 aa4.72□□□□□ -1.65
HMGN1-205ENST00000419378 GRIFINA4D1Z8 144 aa4.72□□□□□ -1.65
HMGN1-205ENST00000419378 B4DEV8 164 aa4.72□□□□□ -1.65
HMGN1-205ENST00000419378 H3BVH4 76 aa4.72□□□□□ -1.65
HMGN1-205ENST00000419378 SIVA1O15304 175 aa4.72□□□□□ -1.65
HMGN1-205ENST00000419378 SULT1A2P50226 295 aa4.72□□□□□ -1.65
HMGN1-205ENST00000419378 DNLZQ5SXM8 178 aa4.72□□□□□ -1.65
HMGN1-205ENST00000419378 LYPD5Q6UWN5 251 aa4.72□□□□□ -1.65
HMGN1-205ENST00000419378 SLC51BQ86UW2 128 aa4.72□□□□□ -1.65
HMGN1-205ENST00000419378 SLC25A29Q8N8R3 303 aa4.72□□□□□ -1.65
HMGN1-205ENST00000419378 GNG13Q9P2W3 67 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms