RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 CXCL5P42830 114 aa4.13□□□□□ -1.75
ECHDC1-206ENST00000417628 FXYD2P54710 66 aa4.13□□□□□ -1.75
ECHDC1-206ENST00000417628 MRPL2Q5T653 305 aaKnown RBP4.13□□□□□ -1.75
ECHDC1-206ENST00000417628 GAGE2AQ6NT46 116 aa4.13□□□□□ -1.75
ECHDC1-206ENST00000417628 SLC48A1Q6P1K1 146 aa4.13□□□□□ -1.75
ECHDC1-206ENST00000417628 AAED1Q7RTV5 226 aa4.13□□□□□ -1.75
ECHDC1-206ENST00000417628 LYZL2Q7Z4W2 148 aa4.13□□□□□ -1.75
ECHDC1-206ENST00000417628 OR5AS1Q8N127 324 aa4.13□□□□□ -1.75
ECHDC1-206ENST00000417628 ABHD12Q8N2K0 398 aa4.13□□□□□ -1.75
ECHDC1-206ENST00000417628 CHAC1Q9BUX1 264 aa4.13□□□□□ -1.75
ECHDC1-206ENST00000417628 KRTAP4-11Q9BYQ6 195 aa4.13□□□□□ -1.75
ECHDC1-206ENST00000417628 SLC25A39Q9BZJ4 359 aaPredicted RBP4.13□□□□□ -1.75
ECHDC1-206ENST00000417628 HILPDAQ9Y5L2 63 aa4.13□□□□□ -1.75
ECHDC1-206ENST00000417628 LOC107984640A0A0U1RRK4 108 aa4.12□□□□□ -1.75
ECHDC1-206ENST00000417628 C15orf62A8K5M9 175 aa4.12□□□□□ -1.75
ECHDC1-206ENST00000417628 J3QQQ9 107 aa4.12□□□□□ -1.75
ECHDC1-206ENST00000417628 ATOX1O00244 68 aa4.12□□□□□ -1.75
ECHDC1-206ENST00000417628 ACYP1P07311 99 aa4.12□□□□□ -1.75
ECHDC1-206ENST00000417628 PRDX2P32119 198 aa4.12□□□□□ -1.75
ECHDC1-206ENST00000417628 SLC38A11Q08AI6 406 aa4.12□□□□□ -1.75
ECHDC1-206ENST00000417628 ARFRP1Q13795 201 aa4.12□□□□□ -1.75
ECHDC1-206ENST00000417628 C4orf26Q17RF5 130 aa4.12□□□□□ -1.75
ECHDC1-206ENST00000417628 SLC25A48Q6ZT89 311 aaKnown RBP4.12□□□□□ -1.75
ECHDC1-206ENST00000417628 FAM19A1Q7Z5A9 133 aa4.12□□□□□ -1.75
ECHDC1-206ENST00000417628 ITLN1Q8WWA0 313 aa4.12□□□□□ -1.75
ECHDC1-206ENST00000417628 COPS9Q8WXC6 57 aa4.12□□□□□ -1.75
ECHDC1-206ENST00000417628 DPH3Q96FX2 82 aa4.12□□□□□ -1.75
ECHDC1-206ENST00000417628 ZC2HC1AQ96GY0 325 aa4.12□□□□□ -1.75
ECHDC1-206ENST00000417628 LAMTOR3Q9UHA4 124 aa4.12□□□□□ -1.75
ECHDC1-206ENST00000417628 R4GMQ9 66 aa4.12□□□□□ -1.75
ECHDC1-206ENST00000417628 TANC2Q9HCD6 1990 aa4.12□□□□□ -1.75
ECHDC1-206ENST00000417628 A8MWL6 223 aa4.11□□□□□ -1.75
ECHDC1-206ENST00000417628 TNFSF12O43508 249 aa4.11□□□□□ -1.75
ECHDC1-206ENST00000417628 CST7O76096 145 aa4.11□□□□□ -1.75
ECHDC1-206ENST00000417628 NDUFC2O95298 119 aa4.11□□□□□ -1.75
ECHDC1-206ENST00000417628 IGKV1D-33P01593 117 aa4.11□□□□□ -1.75
ECHDC1-206ENST00000417628 IGKV1-33P01594 117 aa4.11□□□□□ -1.75
ECHDC1-206ENST00000417628 GYPBP06028 91 aa4.11□□□□□ -1.75
ECHDC1-206ENST00000417628 SCGB1C2P0DMR2 95 aa4.11□□□□□ -1.75
ECHDC1-206ENST00000417628 RPL35AP18077 110 aaKnown RBP4.11□□□□□ -1.75
ECHDC1-206ENST00000417628 GCHFRP30047 84 aa4.11□□□□□ -1.75
ECHDC1-206ENST00000417628 MYCNOSP40205 109 aa4.11□□□□□ -1.75
ECHDC1-206ENST00000417628 HERV-K104P61576 105 aa4.11□□□□□ -1.75
ECHDC1-206ENST00000417628 C12orf74Q32Q52 190 aa4.11□□□□□ -1.75
ECHDC1-206ENST00000417628 TMEM170BQ5T4T1 132 aa4.11□□□□□ -1.75
ECHDC1-206ENST00000417628 C6orf201Q7Z4U5 140 aa4.11□□□□□ -1.75
ECHDC1-206ENST00000417628 PDPNQ86YL7 162 aa4.11□□□□□ -1.75
ECHDC1-206ENST00000417628 POM121L12Q8N7R1 296 aa4.11□□□□□ -1.75
ECHDC1-206ENST00000417628 PFN4Q8NHR9 129 aa4.11□□□□□ -1.75
ECHDC1-206ENST00000417628 LINC00477Q96M19 166 aa4.11□□□□□ -1.75
ECHDC1-206ENST00000417628 ZNF488Q96MN9 340 aa4.11□□□□□ -1.75
ECHDC1-206ENST00000417628 MRPL20Q9BYC9 149 aaKnown RBP4.11□□□□□ -1.75
ECHDC1-206ENST00000417628 VSIRQ9H7M9 311 aa4.11□□□□□ -1.75
ECHDC1-206ENST00000417628 TRAV27A0A087WT01 109 aa4.1□□□□□ -1.75
ECHDC1-206ENST00000417628 A0A0A6YYD4 124 aa4.1□□□□□ -1.75
ECHDC1-206ENST00000417628 C15orf61A6NNL5 157 aa4.1□□□□□ -1.75
ECHDC1-206ENST00000417628 TMEM178BH3BS89 294 aa4.1□□□□□ -1.75
ECHDC1-206ENST00000417628 NPYP01303 97 aa4.1□□□□□ -1.75
ECHDC1-206ENST00000417628 IGKV1D-16P01601 117 aa4.1□□□□□ -1.75
ECHDC1-206ENST00000417628 BGLAPP02818 100 aa4.1□□□□□ -1.75
ECHDC1-206ENST00000417628 IL4P05112 153 aa4.1□□□□□ -1.75
ECHDC1-206ENST00000417628 ASAH2BP0C7U1 165 aa4.1□□□□□ -1.75
ECHDC1-206ENST00000417628 PFN2P35080 140 aa4.1□□□□□ -1.75
ECHDC1-206ENST00000417628 SAA4P35542 130 aa4.1□□□□□ -1.75
ECHDC1-206ENST00000417628 HIST1H4AP62805 103 aaKnown RBP4.1□□□□□ -1.75
ECHDC1-206ENST00000417628 HRCT1Q6UXD1 115 aa4.1□□□□□ -1.75
ECHDC1-206ENST00000417628 VMO1Q7Z5L0 202 aa4.1□□□□□ -1.75
ECHDC1-206ENST00000417628 C11orf53Q8IXP5 236 aa4.1□□□□□ -1.75
ECHDC1-206ENST00000417628 AMN1Q8IY45 258 aa4.1□□□□□ -1.75
ECHDC1-206ENST00000417628 CNRIP1Q96F85 164 aaPredicted RBP4.1□□□□□ -1.75
ECHDC1-206ENST00000417628 ODF3Q96PU9 254 aa4.1□□□□□ -1.75
ECHDC1-206ENST00000417628 HDHD3Q9BSH5 251 aaPredicted RBP4.1□□□□□ -1.75
ECHDC1-206ENST00000417628 SHANK2-AS3Q9BTD1 123 aa4.1□□□□□ -1.75
ECHDC1-206ENST00000417628 TTTY10Q9BZA0 68 aa4.1□□□□□ -1.75
ECHDC1-206ENST00000417628 GFRA4Q9GZZ7 299 aa4.1□□□□□ -1.75
ECHDC1-206ENST00000417628 SLC25A22Q9H936 323 aa4.1□□□□□ -1.75
ECHDC1-206ENST00000417628 NHP2Q9NX24 153 aaKnown RBP4.1□□□□□ -1.75
ECHDC1-206ENST00000417628 TP73-AS1Q9UF72 201 aa4.1□□□□□ -1.75
ECHDC1-206ENST00000417628 KLK5Q9Y337 293 aaPredicted RBP4.1□□□□□ -1.75
ECHDC1-206ENST00000417628 PYGO1Q9Y3Y4 419 aa4.1□□□□□ -1.75
ECHDC1-206ENST00000417628 TRAV12-2A0A075B6T6 113 aa4.09□□□□□ -1.75
ECHDC1-206ENST00000417628 MYMXA0A1B0GTQ4 84 aa4.09□□□□□ -1.75
ECHDC1-206ENST00000417628 A0A1W2PQD3 144 aa4.09□□□□□ -1.75
ECHDC1-206ENST00000417628 C16orf90A8MZG2 172 aa4.09□□□□□ -1.75
ECHDC1-206ENST00000417628 SYNGR2O43760 224 aa4.09□□□□□ -1.75
ECHDC1-206ENST00000417628 IGHV3-13P01766 116 aa4.09□□□□□ -1.75
ECHDC1-206ENST00000417628 TRACP01848 142 aa4.09□□□□□ -1.75
ECHDC1-206ENST00000417628 HMGN2P05204 90 aaKnown RBP4.09□□□□□ -1.75
ECHDC1-206ENST00000417628 CTLA4P16410 223 aa4.09□□□□□ -1.75
ECHDC1-206ENST00000417628 CCL1P22362 96 aa4.09□□□□□ -1.75
ECHDC1-206ENST00000417628 UBE2D1P51668 147 aa4.09□□□□□ -1.75
ECHDC1-206ENST00000417628 HBBP68871 147 aa4.09□□□□□ -1.75
ECHDC1-206ENST00000417628 CEMP1Q6PRD7 247 aaPredicted RBP4.09□□□□□ -1.75
ECHDC1-206ENST00000417628 FGFRL1Q8N441 504 aa4.09□□□□□ -1.75
ECHDC1-206ENST00000417628 IFI27L1Q96BM0 104 aa4.09□□□□□ -1.75
ECHDC1-206ENST00000417628 ARHGAP5-AS1Q96IT6 56 aa4.09□□□□□ -1.75
ECHDC1-206ENST00000417628 MGST2Q99735 147 aa4.09□□□□□ -1.75
ECHDC1-206ENST00000417628 GLIPR2Q9H4G4 154 aa4.09□□□□□ -1.75
ECHDC1-206ENST00000417628 RETNQ9HD89 108 aa4.09□□□□□ -1.75
ECHDC1-206ENST00000417628 LHFPL6Q9Y693 200 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms