RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 PHLDA1Q8WV24 401 aaPredicted RBP6.02□□□□□ -1.45
TRIM48-201ENST00000417545 GTSF1Q8WW33 167 aa6.02□□□□□ -1.45
TRIM48-201ENST00000417545 PTH2Q96A98 100 aa6.02□□□□□ -1.45
TRIM48-201ENST00000417545 SSBP4Q9BWG4 385 aaPredicted RBP6.02□□□□□ -1.45
TRIM48-201ENST00000417545 SCRT2Q9NQ03 307 aa6.02□□□□□ -1.45
TRIM48-201ENST00000417545 KLK5Q9Y337 293 aaPredicted RBP6.02□□□□□ -1.45
TRIM48-201ENST00000417545 A0A087WWC5 75 aa6.01□□□□□ -1.45
TRIM48-201ENST00000417545 A0A087WWL8 130 aa6.01□□□□□ -1.45
TRIM48-201ENST00000417545 RS1O15537 224 aa6.01□□□□□ -1.45
TRIM48-201ENST00000417545 CAMPP49913 170 aa6.01□□□□□ -1.45
TRIM48-201ENST00000417545 RAB4BP61018 213 aa6.01□□□□□ -1.45
TRIM48-201ENST00000417545 SLAQ13239 276 aa6.01□□□□□ -1.45
TRIM48-201ENST00000417545 MRPL54Q6P161 138 aaKnown RBP6.01□□□□□ -1.45
TRIM48-201ENST00000417545 WDR73Q6P4I2 378 aa6.01□□□□□ -1.45
TRIM48-201ENST00000417545 C14orf178Q8N769 122 aaPredicted RBP6.01□□□□□ -1.45
TRIM48-201ENST00000417545 BTF3L4Q96K17 158 aa6.01□□□□□ -1.45
TRIM48-201ENST00000417545 URGCP-MRPS24S4R325 110 aa6.01□□□□□ -1.45
TRIM48-201ENST00000417545 NBEAL2Q6ZNJ1 2754 aa6.01□□□□□ -1.45
TRIM48-201ENST00000417545 MUC4Q99102 2169 aa6.01□□□□□ -1.45
TRIM48-201ENST00000417545 PRKDCP78527 4128 aaKnown RBP6□□□□□ -1.45
TRIM48-201ENST00000417545 A0A1B0GW15 77 aa6□□□□□ -1.45
TRIM48-201ENST00000417545 FAM3BP58499 235 aaPredicted RBP6□□□□□ -1.45
TRIM48-201ENST00000417545 HBBP68871 147 aa6□□□□□ -1.45
TRIM48-201ENST00000417545 CFAP126Q5VTH2 177 aa6□□□□□ -1.45
TRIM48-201ENST00000417545 ZFAND6Q6FIF0 208 aa6□□□□□ -1.45
TRIM48-201ENST00000417545 LINC00612Q8N6U2 182 aa6□□□□□ -1.45
TRIM48-201ENST00000417545 MUC7Q8TAX7 377 aa6□□□□□ -1.45
TRIM48-201ENST00000417545 ZNF479Q96JC4 524 aa6□□□□□ -1.45
TRIM48-201ENST00000417545 C18orf15Q96N68 181 aa6□□□□□ -1.45
TRIM48-201ENST00000417545 IMMP2LQ96T52 175 aa6□□□□□ -1.45
TRIM48-201ENST00000417545 PRADC1Q9BSG0 188 aa6□□□□□ -1.45
TRIM48-201ENST00000417545 DPH3P1Q9H4G8 78 aa6□□□□□ -1.45
TRIM48-201ENST00000417545 JPT2Q9H910 190 aa6□□□□□ -1.45
TRIM48-201ENST00000417545 A0A0J9YY99 117 aa5.99□□□□□ -1.45
TRIM48-201ENST00000417545 IGLL5B9A064 214 aa5.99□□□□□ -1.45
TRIM48-201ENST00000417545 PAX4O43316 350 aa5.99□□□□□ -1.45
TRIM48-201ENST00000417545 NXPH4O95158 308 aa5.99□□□□□ -1.45
TRIM48-201ENST00000417545 FOXA3P55318 350 aaPredicted RBP5.99□□□□□ -1.45
TRIM48-201ENST00000417545 ZFP2Q6ZN57 461 aa5.99□□□□□ -1.45
TRIM48-201ENST00000417545 ATP5L2Q7Z4Y8 100 aa5.99□□□□□ -1.45
TRIM48-201ENST00000417545 TMEM242Q9NWH2 141 aa5.99□□□□□ -1.45
TRIM48-201ENST00000417545 MSRB1Q9NZV6 116 aa5.99□□□□□ -1.45
TRIM48-201ENST00000417545 PRO0255Q9UI72 69 aa5.99□□□□□ -1.45
TRIM48-201ENST00000417545 HHLA3Q9XRX5 114 aa5.99□□□□□ -1.45
TRIM48-201ENST00000417545 IGHV4-4A0A075B6R2 117 aa5.99□□□□□ -1.45
TRIM48-201ENST00000417545 TRAV9-1A0A075B6T8 112 aa5.99□□□□□ -1.45
TRIM48-201ENST00000417545 H7C1H1 209 aa5.99□□□□□ -1.45
TRIM48-201ENST00000417545 NUDT3O95989 172 aa5.99□□□□□ -1.45
TRIM48-201ENST00000417545 EVI2AP22794 236 aa5.99□□□□□ -1.45
TRIM48-201ENST00000417545 RHOHQ15669 191 aa5.99□□□□□ -1.45
TRIM48-201ENST00000417545 CEMP1Q6PRD7 247 aaPredicted RBP5.99□□□□□ -1.45
TRIM48-201ENST00000417545 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.99□□□□□ -1.45
TRIM48-201ENST00000417545 CNFNQ9BYD5 112 aa5.99□□□□□ -1.45
TRIM48-201ENST00000417545 DNAH9Q9NYC9 4486 aa5.98□□□□□ -1.45
TRIM48-201ENST00000417545 TRAV26-1A0A087WT03 109 aa5.98□□□□□ -1.45
TRIM48-201ENST00000417545 K7EQD1 137 aa5.98□□□□□ -1.45
TRIM48-201ENST00000417545 FHL2Q14192 279 aa5.98□□□□□ -1.45
TRIM48-201ENST00000417545 TMEM88Q6PEY1 159 aa5.98□□□□□ -1.45
TRIM48-201ENST00000417545 ZNF575Q86XF7 245 aa5.98□□□□□ -1.45
TRIM48-201ENST00000417545 FAM210BQ96KR6 192 aa5.98□□□□□ -1.45
TRIM48-201ENST00000417545 SAMD10Q9BYL1 202 aa5.98□□□□□ -1.45
TRIM48-201ENST00000417545 SMCO4Q9NRQ5 59 aa5.98□□□□□ -1.45
TRIM48-201ENST00000417545 HUWE1Q7Z6Z7 4374 aaKnown RBP5.97□□□□□ -1.45
TRIM48-201ENST00000417545 C3orf84H3BNL1 204 aa5.97□□□□□ -1.45
TRIM48-201ENST00000417545 CRYGDP07320 174 aa5.97□□□□□ -1.45
TRIM48-201ENST00000417545 GYPEP15421 78 aa5.97□□□□□ -1.45
TRIM48-201ENST00000417545 GATA1P15976 413 aaPredicted RBP5.97□□□□□ -1.45
TRIM48-201ENST00000417545 HOXA5P20719 270 aa5.97□□□□□ -1.45
TRIM48-201ENST00000417545 COX19Q49B96 90 aa5.97□□□□□ -1.45
TRIM48-201ENST00000417545 POM121L12Q8N7R1 296 aa5.97□□□□□ -1.45
TRIM48-201ENST00000417545 C15orf53Q8NAA6 179 aa5.97□□□□□ -1.45
TRIM48-201ENST00000417545 TMEM191AQ9H0A3 160 aa5.97□□□□□ -1.45
TRIM48-201ENST00000417545 ICOSQ9Y6W8 199 aa5.97□□□□□ -1.45
TRIM48-201ENST00000417545 COL7A1Q02388 2944 aa5.96□□□□□ -1.45
TRIM48-201ENST00000417545 NACAE9PAV3 2078 aa5.96□□□□□ -1.46
TRIM48-201ENST00000417545 TRBV6-4A0A1B0GX49 114 aa5.96□□□□□ -1.46
TRIM48-201ENST00000417545 SRIP30626 198 aa5.96□□□□□ -1.46
TRIM48-201ENST00000417545 CRYBA4P53673 196 aa5.96□□□□□ -1.46
TRIM48-201ENST00000417545 RPL36AP83881 106 aaKnown RBP5.96□□□□□ -1.46
TRIM48-201ENST00000417545 RASL11AQ6T310 242 aa5.96□□□□□ -1.46
TRIM48-201ENST00000417545 ATRAIDQ6UW56 229 aa5.96□□□□□ -1.46
TRIM48-201ENST00000417545 CBLN2Q8IUK8 224 aa5.96□□□□□ -1.46
TRIM48-201ENST00000417545 UBE2DNLQ8IWF7 75 aa5.96□□□□□ -1.46
TRIM48-201ENST00000417545 SLC25A29Q8N8R3 303 aa5.96□□□□□ -1.46
TRIM48-201ENST00000417545 FRZBQ92765 325 aa5.96□□□□□ -1.46
TRIM48-201ENST00000417545 RPL36ALQ969Q0 106 aaKnown RBP5.96□□□□□ -1.46
TRIM48-201ENST00000417545 TNFRSF18Q9Y5U5 241 aa5.96□□□□□ -1.46
TRIM48-201ENST00000417545 TENM3Q9P273 2699 aa5.96□□□□□ -1.46
TRIM48-201ENST00000417545 GAGE12JA6NER3 117 aa5.95□□□□□ -1.46
TRIM48-201ENST00000417545 HLA-DQA1P01909 254 aa5.95□□□□□ -1.46
TRIM48-201ENST00000417545 CKS2P33552 79 aa5.95□□□□□ -1.46
TRIM48-201ENST00000417545 TCTAP57738 103 aa5.95□□□□□ -1.46
TRIM48-201ENST00000417545 GAGE1Q13065 139 aa5.95□□□□□ -1.46
TRIM48-201ENST00000417545 GAGE4Q13068 117 aa5.95□□□□□ -1.46
TRIM48-201ENST00000417545 GAGE5Q13069 117 aa5.95□□□□□ -1.46
TRIM48-201ENST00000417545 MRPL23Q16540 153 aaKnown RBP5.95□□□□□ -1.46
TRIM48-201ENST00000417545 GAGE13Q4V321 117 aa5.95□□□□□ -1.46
TRIM48-201ENST00000417545 LCE3BQ5TA77 95 aa5.95□□□□□ -1.46
TRIM48-201ENST00000417545 SUMO4Q6EEV6 95 aa5.95□□□□□ -1.46
TRIM48-201ENST00000417545 SH2D6Q7Z4S9 175 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms