RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 UPK3BQ9BT76 320 aa4.8□□□□□ -1.64
CCNT1-202ENST00000417344 TIMM21Q9BVV7 248 aa4.8□□□□□ -1.64
CCNT1-202ENST00000417344 DPH3P1Q9H4G8 78 aa4.8□□□□□ -1.64
CCNT1-202ENST00000417344 TRANK1O15050 2925 aa4.8□□□□□ -1.64
CCNT1-202ENST00000417344 A0A0J9YXY3 114 aa4.8□□□□□ -1.64
CCNT1-202ENST00000417344 MGPP08493 103 aa4.8□□□□□ -1.64
CCNT1-202ENST00000417344 PI4KAP42356 2102 aa4.8□□□□□ -1.64
CCNT1-202ENST00000417344 SERP2Q8N6R1 65 aa4.8□□□□□ -1.64
CCNT1-202ENST00000417344 DEFB127Q9H1M4 99 aa4.8□□□□□ -1.64
CCNT1-202ENST00000417344 DYNLRB1Q9NP97 96 aa4.8□□□□□ -1.64
CCNT1-202ENST00000417344 SPRR3Q9UBC9 169 aa4.8□□□□□ -1.64
CCNT1-202ENST00000417344 S4R3C0 116 aa4.8□□□□□ -1.64
CCNT1-202ENST00000417344 IGHV3-64A0A075B6Q5 118 aa4.79□□□□□ -1.64
CCNT1-202ENST00000417344 NTN3O00634 580 aaPredicted RBP4.79□□□□□ -1.64
CCNT1-202ENST00000417344 PRSS2P07478 247 aa4.79□□□□□ -1.64
CCNT1-202ENST00000417344 RPL39P62891 51 aaKnown RBP4.79□□□□□ -1.64
CCNT1-202ENST00000417344 NSUN5P1Q3KNT7 163 aa4.79□□□□□ -1.64
CCNT1-202ENST00000417344 CNEP1R1Q8N9A8 125 aa4.79□□□□□ -1.64
CCNT1-202ENST00000417344 C1orf43Q9BWL3 253 aa4.79□□□□□ -1.64
CCNT1-202ENST00000417344 DSCAML1Q8TD84 2053 aa4.79□□□□□ -1.64
CCNT1-202ENST00000417344 TRGV5A0A0B4J1U4 118 aa4.79□□□□□ -1.64
CCNT1-202ENST00000417344 TINCRA0A1B0GVN0 87 aa4.79□□□□□ -1.64
CCNT1-202ENST00000417344 PLA2G1BP04054 148 aaKnown RBP4.79□□□□□ -1.64
CCNT1-202ENST00000417344 Q6ZSV7 163 aa4.79□□□□□ -1.64
CCNT1-202ENST00000417344 GPHB5Q86YW7 130 aa4.79□□□□□ -1.64
CCNT1-202ENST00000417344 RNF182Q8N6D2 247 aa4.79□□□□□ -1.64
CCNT1-202ENST00000417344 LITAFQ99732 161 aa4.79□□□□□ -1.64
CCNT1-202ENST00000417344 PRUNE2Q8WUY3 3088 aa4.78□□□□□ -1.64
CCNT1-202ENST00000417344 FRYLO94915 3013 aa4.78□□□□□ -1.64
CCNT1-202ENST00000417344 PFN2P35080 140 aa4.78□□□□□ -1.64
CCNT1-202ENST00000417344 KLRB1Q12918 225 aa4.78□□□□□ -1.64
CCNT1-202ENST00000417344 LINC00336Q6ZUF6 198 aa4.78□□□□□ -1.64
CCNT1-202ENST00000417344 DAND5Q8N907 189 aa4.78□□□□□ -1.64
CCNT1-202ENST00000417344 C10orf105Q8TEF2 133 aa4.78□□□□□ -1.64
CCNT1-202ENST00000417344 ARFGEF3Q5TH69 2177 aa4.78□□□□□ -1.64
CCNT1-202ENST00000417344 CELSR3Q9NYQ7 3312 aa4.77□□□□□ -1.65
CCNT1-202ENST00000417344 IGHV1-46P01743 117 aa4.77□□□□□ -1.65
CCNT1-202ENST00000417344 DAZ2Q13117 558 aaKnown RBP4.77□□□□□ -1.65
CCNT1-202ENST00000417344 DAZ4Q86SG3 579 aaKnown RBP4.77□□□□□ -1.65
CCNT1-202ENST00000417344 TMEM61Q8N0U2 210 aa4.77□□□□□ -1.65
CCNT1-202ENST00000417344 DAZ1Q9NQZ3 744 aaKnown RBP4.77□□□□□ -1.65
CCNT1-202ENST00000417344 DAZ3Q9NR90 486 aaKnown RBP4.77□□□□□ -1.65
CCNT1-202ENST00000417344 PRR14LQ5THK1 2151 aa4.77□□□□□ -1.65
CCNT1-202ENST00000417344 IGLV3-9A0A075B6K5 115 aa4.77□□□□□ -1.65
CCNT1-202ENST00000417344 IGHV1-3A0A0C4DH29 117 aa4.77□□□□□ -1.65
CCNT1-202ENST00000417344 EPOPA6NHQ4 379 aa4.77□□□□□ -1.65
CCNT1-202ENST00000417344 LY6LH3BQJ8 138 aa4.77□□□□□ -1.65
CCNT1-202ENST00000417344 IGHV1-69P01742 117 aa4.77□□□□□ -1.65
CCNT1-202ENST00000417344 RPL35AP18077 110 aaKnown RBP4.77□□□□□ -1.65
CCNT1-202ENST00000417344 MIAQ16674 131 aa4.77□□□□□ -1.65
CCNT1-202ENST00000417344 ADAMTSL4-AS1Q5T5F5 129 aa4.77□□□□□ -1.65
CCNT1-202ENST00000417344 SAP25Q8TEE9 199 aa4.77□□□□□ -1.65
CCNT1-202ENST00000417344 DEFB104AQ8WTQ1 72 aa4.77□□□□□ -1.65
CCNT1-202ENST00000417344 ZNF580Q9UK33 172 aa4.77□□□□□ -1.65
CCNT1-202ENST00000417344 PHLDA3Q9Y5J5 127 aa4.77□□□□□ -1.65
CCNT1-202ENST00000417344 DSCAMO60469 2012 aa4.77□□□□□ -1.65
CCNT1-202ENST00000417344 TRIOO75962 3097 aa4.76□□□□□ -1.65
CCNT1-202ENST00000417344 VCYO14598 125 aa4.76□□□□□ -1.65
CCNT1-202ENST00000417344 IGHV1-8P0DP01 117 aa4.76□□□□□ -1.65
CCNT1-202ENST00000417344 S100A4P26447 101 aaKnown RBP4.76□□□□□ -1.65
CCNT1-202ENST00000417344 POLR2KP53803 58 aaKnown RBP4.76□□□□□ -1.65
CCNT1-202ENST00000417344 SYNJ2BPP57105 145 aa4.76□□□□□ -1.65
CCNT1-202ENST00000417344 TIRAPP58753 221 aa4.76□□□□□ -1.65
CCNT1-202ENST00000417344 SEC61GP60059 68 aa4.76□□□□□ -1.65
CCNT1-202ENST00000417344 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.76□□□□□ -1.65
CCNT1-202ENST00000417344 LINC01356Q8N9X3 169 aa4.76□□□□□ -1.65
CCNT1-202ENST00000417344 IGLV11-55A0A075B6I3 123 aa4.75□□□□□ -1.65
CCNT1-202ENST00000417344 TRAV12-3A0A0B4J271 114 aa4.75□□□□□ -1.65
CCNT1-202ENST00000417344 NDUFC2-KCTD14E9PQ53 114 aa4.75□□□□□ -1.65
CCNT1-202ENST00000417344 M0R1B8 84 aa4.75□□□□□ -1.65
CCNT1-202ENST00000417344 INAFM2P0DMQ5 153 aa4.75□□□□□ -1.65
CCNT1-202ENST00000417344 IGHV3-30-3P0DP02 117 aa4.75□□□□□ -1.65
CCNT1-202ENST00000417344 NPC2P61916 151 aa4.75□□□□□ -1.65
CCNT1-202ENST00000417344 C9orf85Q96MD7 179 aa4.75□□□□□ -1.65
CCNT1-202ENST00000417344 PKIGQ9Y2B9 76 aa4.75□□□□□ -1.65
CCNT1-202ENST00000417344 SLC25A15Q9Y619 301 aa4.75□□□□□ -1.65
CCNT1-202ENST00000417344 PLXNB1O43157 2135 aa4.75□□□□□ -1.65
CCNT1-202ENST00000417344 WDR87Q6ZQQ6 2873 aa4.75□□□□□ -1.65
CCNT1-202ENST00000417344 DCHS1Q96JQ0 3298 aa4.75□□□□□ -1.65
CCNT1-202ENST00000417344 IGHV4OR15-8A0A075B7B6 117 aa4.75□□□□□ -1.65
CCNT1-202ENST00000417344 IGHV3OR16-10A0A075B7F0 116 aa4.75□□□□□ -1.65
CCNT1-202ENST00000417344 A0A087WW49 117 aa4.75□□□□□ -1.65
CCNT1-202ENST00000417344 M0R1W7 72 aa4.75□□□□□ -1.65
CCNT1-202ENST00000417344 COX7A2LO14548 114 aa4.75□□□□□ -1.65
CCNT1-202ENST00000417344 NDUFB3O43676 98 aa4.75□□□□□ -1.65
CCNT1-202ENST00000417344 IGHV3-23P01764 117 aa4.75□□□□□ -1.65
CCNT1-202ENST00000417344 ZNF415Q09FC8 603 aa4.75□□□□□ -1.65
CCNT1-202ENST00000417344 PRR9Q5T870 116 aa4.75□□□□□ -1.65
CCNT1-202ENST00000417344 C9orf47Q6ZRZ4 202 aa4.75□□□□□ -1.65
CCNT1-202ENST00000417344 TMEM86BQ8N661 226 aa4.75□□□□□ -1.65
CCNT1-202ENST00000417344 MDS2Q8NDY4 140 aa4.75□□□□□ -1.65
CCNT1-202ENST00000417344 PRSS33Q8NF86 280 aa4.75□□□□□ -1.65
CCNT1-202ENST00000417344 OPRPNQ99935 248 aaPredicted RBP4.75□□□□□ -1.65
CCNT1-202ENST00000417344 CFAP47Q6ZTR5 3102 aa4.75□□□□□ -1.65
CCNT1-202ENST00000417344 RAI1Q7Z5J4 1906 aaPredicted RBP4.75□□□□□ -1.65
CCNT1-202ENST00000417344 IGHV3OR16-8A0A075B7F1 116 aa4.74□□□□□ -1.65
CCNT1-202ENST00000417344 A0A0J9YXV3 536 aa4.74□□□□□ -1.65
CCNT1-202ENST00000417344 USP17L23D6RBM5 183 aa4.74□□□□□ -1.65
CCNT1-202ENST00000417344 RS1O15537 224 aa4.74□□□□□ -1.65
CCNT1-202ENST00000417344 BUB3O43684 328 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms