RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 OR2D3Q8NGH3 330 aa8.86□□□□□ -0.99
LINC00339-202ENST00000416769 OR10G8Q8NGN5 311 aa8.86□□□□□ -0.99
LINC00339-202ENST00000416769 SFRP2Q96HF1 295 aa8.86□□□□□ -0.99
LINC00339-202ENST00000416769 IGHV3-16A0A0C4DH30 117 aa8.85□□□□□ -0.99
LINC00339-202ENST00000416769 EPM2AB3EWF7 344 aa8.85□□□□□ -0.99
LINC00339-202ENST00000416769 XGP55808 180 aa8.85□□□□□ -0.99
LINC00339-202ENST00000416769 RPL19P84098 196 aaKnown RBP8.85□□□□□ -0.99
LINC00339-202ENST00000416769 CT83Q5H943 113 aa8.85□□□□□ -0.99
LINC00339-202ENST00000416769 SPXQ9BT56 116 aa8.85□□□□□ -0.99
LINC00339-202ENST00000416769 RPP21Q9H633 154 aaKnown RBP8.85□□□□□ -0.99
LINC00339-202ENST00000416769 MDFICQ9P1T7 246 aa8.85□□□□□ -0.99
LINC00339-202ENST00000416769 TMSB15BA0A087X1C1 80 aa8.84□□□□□ -0.99
LINC00339-202ENST00000416769 GRIFINA4D1Z8 144 aa8.84□□□□□ -0.99
LINC00339-202ENST00000416769 A8MWL6 223 aa8.84□□□□□ -0.99
LINC00339-202ENST00000416769 SNURFLB1AK76 121 aa8.84□□□□□ -0.99
LINC00339-202ENST00000416769 PPP1R2P9O14990 202 aa8.84□□□□□ -0.99
LINC00339-202ENST00000416769 DNAH10OSP0CZ25 163 aa8.84□□□□□ -0.99
LINC00339-202ENST00000416769 RNASE3P12724 160 aaKnown RBP8.84□□□□□ -0.99
LINC00339-202ENST00000416769 S100A4P26447 101 aaKnown RBP8.84□□□□□ -0.99
LINC00339-202ENST00000416769 ASIPP42127 132 aa8.84□□□□□ -0.99
LINC00339-202ENST00000416769 TCL1AP56279 114 aa8.84□□□□□ -0.99
LINC00339-202ENST00000416769 HAMPP81172 84 aa8.84□□□□□ -0.99
LINC00339-202ENST00000416769 ZNF415Q09FC8 603 aa8.84□□□□□ -0.99
LINC00339-202ENST00000416769 DAZ2Q13117 558 aaKnown RBP8.84□□□□□ -0.99
LINC00339-202ENST00000416769 Q6ZTI0 123 aa8.84□□□□□ -0.99
LINC00339-202ENST00000416769 ANAPC16Q96DE5 110 aa8.84□□□□□ -0.99
LINC00339-202ENST00000416769 VSIG2Q96IQ7 327 aa8.84□□□□□ -0.99
LINC00339-202ENST00000416769 UPK3BQ9BT76 320 aa8.84□□□□□ -0.99
LINC00339-202ENST00000416769 GSN-AS1Q9NRJ2 163 aa8.84□□□□□ -0.99
LINC00339-202ENST00000416769 MRPS16Q9Y3D3 137 aaKnown RBP8.84□□□□□ -0.99
LINC00339-202ENST00000416769 V9GYV3 84 aa8.84□□□□□ -0.99
LINC00339-202ENST00000416769 A0A096LPF7 62 aa8.83□□□□□ -1
LINC00339-202ENST00000416769 MT-ND4LP03901 98 aa8.83□□□□□ -1
LINC00339-202ENST00000416769 INAFM2P0DMQ5 153 aa8.83□□□□□ -1
LINC00339-202ENST00000416769 BTF3P20290 206 aaKnown RBP8.83□□□□□ -1
LINC00339-202ENST00000416769 FOXA3P55318 350 aaPredicted RBP8.83□□□□□ -1
LINC00339-202ENST00000416769 KRTAP10-1P60331 282 aa8.83□□□□□ -1
LINC00339-202ENST00000416769 TTC32Q5I0X7 151 aa8.83□□□□□ -1
LINC00339-202ENST00000416769 C9orf85Q96MD7 179 aa8.83□□□□□ -1
LINC00339-202ENST00000416769 SSBP4Q9BWG4 385 aaPredicted RBP8.83□□□□□ -1
LINC00339-202ENST00000416769 IL36BQ9NZH7 164 aa8.83□□□□□ -1
LINC00339-202ENST00000416769 A0A1W2PPQ1 181 aa8.82□□□□□ -1
LINC00339-202ENST00000416769 FAM231BA6NCW3 169 aa8.82□□□□□ -1
LINC00339-202ENST00000416769 APOC3P02656 99 aa8.82□□□□□ -1
LINC00339-202ENST00000416769 ARMS2P0C7Q2 107 aa8.82□□□□□ -1
LINC00339-202ENST00000416769 CLRN3Q8NCR9 226 aa8.82□□□□□ -1
LINC00339-202ENST00000416769 TSKUQ8WUA8 353 aa8.82□□□□□ -1
LINC00339-202ENST00000416769 PTH2Q96A98 100 aa8.82□□□□□ -1
LINC00339-202ENST00000416769 GFRA4Q9GZZ7 299 aa8.82□□□□□ -1
LINC00339-202ENST00000416769 F2Z2F3 143 aa8.81□□□□□ -1
LINC00339-202ENST00000416769 SNAI2O43623 268 aa8.81□□□□□ -1
LINC00339-202ENST00000416769 SPINK4O60575 86 aa8.81□□□□□ -1
LINC00339-202ENST00000416769 SNAPINO95295 136 aa8.81□□□□□ -1
LINC00339-202ENST00000416769 OR5AL1P0C617 328 aa8.81□□□□□ -1
LINC00339-202ENST00000416769 IGLC6P0CF74 106 aa8.81□□□□□ -1
LINC00339-202ENST00000416769 GZMBP10144 247 aa8.81□□□□□ -1
LINC00339-202ENST00000416769 Q5VSD8 79 aa8.81□□□□□ -1
LINC00339-202ENST00000416769 SVBPQ8N300 66 aa8.81□□□□□ -1
LINC00339-202ENST00000416769 CTDSP1Q9GZU7 261 aa8.81□□□□□ -1
LINC00339-202ENST00000416769 VPS13BQ7Z7G8 4022 aa8.8□□□□□ -1
LINC00339-202ENST00000416769 H3BVH4 76 aa8.8□□□□□ -1
LINC00339-202ENST00000416769 M0R2P5 195 aa8.8□□□□□ -1
LINC00339-202ENST00000416769 SMR3BP02814 79 aaPredicted RBP8.8□□□□□ -1
LINC00339-202ENST00000416769 PIK3CD-AS1Q5SR53 167 aa8.8□□□□□ -1
LINC00339-202ENST00000416769 WDR73Q6P4I2 378 aa8.8□□□□□ -1
LINC00339-202ENST00000416769 FER1L6-AS1Q8NA97 138 aa8.8□□□□□ -1
LINC00339-202ENST00000416769 RASL10AQ92737 203 aa8.8□□□□□ -1
LINC00339-202ENST00000416769 TMEM242Q9NWH2 141 aa8.8□□□□□ -1
LINC00339-202ENST00000416769 C7orf77A4D0Y5 90 aa8.79□□□□□ -1
LINC00339-202ENST00000416769 RHEBQ15382 184 aa8.79□□□□□ -1
LINC00339-202ENST00000416769 GTSF1Q8WW33 167 aa8.79□□□□□ -1
LINC00339-202ENST00000416769 PHLDA3Q9Y5J5 127 aa8.79□□□□□ -1
LINC00339-202ENST00000416769 A0A087WWC5 75 aa8.78□□□□□ -1
LINC00339-202ENST00000416769 SMIM27A0A1W2PRY6 76 aa8.78□□□□□ -1
LINC00339-202ENST00000416769 IGHV3-53P01767 116 aa8.78□□□□□ -1
LINC00339-202ENST00000416769 CACNG7P62955 275 aa8.78□□□□□ -1
LINC00339-202ENST00000416769 LYZL1Q6UWQ5 148 aa8.78□□□□□ -1
LINC00339-202ENST00000416769 IMMP2LQ96T52 175 aa8.78□□□□□ -1
LINC00339-202ENST00000416769 RPS10P5Q9NQ39 176 aa8.78□□□□□ -1
LINC00339-202ENST00000416769 NAT8BQ9UHF3 227 aa8.78□□□□□ -1
LINC00339-202ENST00000416769 TRGV1A0A0A0MS02 117 aa8.77□□□□□ -1.01
LINC00339-202ENST00000416769 NXPH4O95158 308 aa8.77□□□□□ -1.01
LINC00339-202ENST00000416769 CTRLP40313 264 aa8.77□□□□□ -1.01
LINC00339-202ENST00000416769 ZNF876PQ49A33 203 aa8.77□□□□□ -1.01
LINC00339-202ENST00000416769 ZFP82Q8N141 532 aa8.77□□□□□ -1.01
LINC00339-202ENST00000416769 SYT8Q8NBV8 401 aa8.77□□□□□ -1.01
LINC00339-202ENST00000416769 C18orf15Q96N68 181 aa8.77□□□□□ -1.01
LINC00339-202ENST00000416769 HIGD1CA8MV81 97 aa8.76□□□□□ -1.01
LINC00339-202ENST00000416769 H3BNG1 76 aa8.76□□□□□ -1.01
LINC00339-202ENST00000416769 SPANXN1Q5VSR9 72 aa8.76□□□□□ -1.01
LINC00339-202ENST00000416769 NUP35Q8NFH5 326 aa8.76□□□□□ -1.01
LINC00339-202ENST00000416769 OR10AG1Q8NH19 301 aa8.76□□□□□ -1.01
LINC00339-202ENST00000416769 PGLYRP4Q96LB8 373 aa8.76□□□□□ -1.01
LINC00339-202ENST00000416769 TPPP3Q9BW30 176 aa8.76□□□□□ -1.01
LINC00339-202ENST00000416769 CNFNQ9BYD5 112 aa8.76□□□□□ -1.01
LINC00339-202ENST00000416769 MRPL16Q9NX20 251 aaKnown RBP8.76□□□□□ -1.01
LINC00339-202ENST00000416769 TRGV2A0A075B6R0 118 aa8.75□□□□□ -1.01
LINC00339-202ENST00000416769 A0A087WTM6 91 aa8.75□□□□□ -1.01
LINC00339-202ENST00000416769 SIVA1O15304 175 aa8.75□□□□□ -1.01
LINC00339-202ENST00000416769 CIDEAO60543 219 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms