RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 PRR9Q5T870 116 aa14.46□□□□□ -0.09
PTPRU-203ENST00000415600 ZNF575Q86XF7 245 aa14.46□□□□□ -0.09
PTPRU-203ENST00000415600 GATD1Q8NB37 220 aa14.46□□□□□ -0.09
PTPRU-203ENST00000415600 TMEM263Q8WUH6 116 aaKnown RBP14.46□□□□□ -0.09
PTPRU-203ENST00000415600 BORCS7Q96B45 105 aa14.46□□□□□ -0.09
PTPRU-203ENST00000415600 F5H768 121 aa14.45□□□□□ -0.1
PTPRU-203ENST00000415600 M0R2N4 97 aa14.45□□□□□ -0.1
PTPRU-203ENST00000415600 S100A8P05109 93 aa14.45□□□□□ -0.1
PTPRU-203ENST00000415600 CTRLP40313 264 aa14.45□□□□□ -0.1
PTPRU-203ENST00000415600 GFI1BQ5VTD9 330 aa14.45□□□□□ -0.1
PTPRU-203ENST00000415600 LYZL1Q6UWQ5 148 aa14.45□□□□□ -0.1
PTPRU-203ENST00000415600 FER1L6-AS1Q8NA97 138 aa14.45□□□□□ -0.1
PTPRU-203ENST00000415600 ODF3Q96PU9 254 aa14.45□□□□□ -0.1
PTPRU-203ENST00000415600 IGKV3D-20A0A0C4DH25 116 aa14.44□□□□□ -0.1
PTPRU-203ENST00000415600 CBY3A6NI87 242 aa14.44□□□□□ -0.1
PTPRU-203ENST00000415600 LEPP41159 167 aa14.44□□□□□ -0.1
PTPRU-203ENST00000415600 C11orf21Q9P2W6 132 aa14.44□□□□□ -0.1
PTPRU-203ENST00000415600 IFITM10A6NMD0 228 aa14.43□□□□□ -0.1
PTPRU-203ENST00000415600 AZU1P20160 251 aa14.43□□□□□ -0.1
PTPRU-203ENST00000415600 HECTD4Q9Y4D8 3996 aa14.43□□□□□ -0.1
PTPRU-203ENST00000415600 TRAV21A0A0B4J279 112 aa14.43□□□□□ -0.1
PTPRU-203ENST00000415600 GPX1P07203 203 aa14.43□□□□□ -0.1
PTPRU-203ENST00000415600 Q0VG73 95 aa14.43□□□□□ -0.1
PTPRU-203ENST00000415600 KIAA1644Q3SXP7 199 aa14.43□□□□□ -0.1
PTPRU-203ENST00000415600 SSBP4Q9BWG4 385 aaPredicted RBP14.43□□□□□ -0.1
PTPRU-203ENST00000415600 GRIFINA4D1Z8 144 aa14.42□□□□□ -0.1
PTPRU-203ENST00000415600 PRSS29PA6NIE9 313 aa14.42□□□□□ -0.1
PTPRU-203ENST00000415600 KLLNB2CW77 178 aa14.42□□□□□ -0.1
PTPRU-203ENST00000415600 PRM2P04554 102 aa14.42□□□□□ -0.1
PTPRU-203ENST00000415600 OR10J3Q5JRS4 329 aa14.42□□□□□ -0.1
PTPRU-203ENST00000415600 TPPP3Q9BW30 176 aa14.42□□□□□ -0.1
PTPRU-203ENST00000415600 IGLV2-18A0A075B6J9 118 aa14.41□□□□□ -0.1
PTPRU-203ENST00000415600 CNFNQ9BYD5 112 aa14.41□□□□□ -0.1
PTPRU-203ENST00000415600 NOP10Q9NPE3 64 aaKnown RBP14.41□□□□□ -0.1
PTPRU-203ENST00000415600 PLAC8L1A1L4L8 177 aa14.4□□□□□ -0.1
PTPRU-203ENST00000415600 S100A2P29034 98 aa14.4□□□□□ -0.1
PTPRU-203ENST00000415600 SRIP30626 198 aa14.4□□□□□ -0.1
PTPRU-203ENST00000415600 PDZD11Q5EBL8 140 aa14.4□□□□□ -0.1
PTPRU-203ENST00000415600 RNASE8Q8TDE3 154 aaKnown RBP14.4□□□□□ -0.1
PTPRU-203ENST00000415600 F2Z2F3 143 aa14.39□□□□□ -0.11
PTPRU-203ENST00000415600 J3KRW8 73 aa14.39□□□□□ -0.11
PTPRU-203ENST00000415600 NUDT3O95989 172 aa14.39□□□□□ -0.11
PTPRU-203ENST00000415600 CCL18P55774 89 aa14.39□□□□□ -0.11
PTPRU-203ENST00000415600 TP53TG3Q9ULZ0 132 aa14.39□□□□□ -0.11
PTPRU-203ENST00000415600 Q6ZQT7 251 aa14.39□□□□□ -0.11
PTPRU-203ENST00000415600 RNASE4P34096 147 aaKnown RBP14.38□□□□□ -0.11
PTPRU-203ENST00000415600 Q6ZR54 194 aa14.38□□□□□ -0.11
PTPRU-203ENST00000415600 ALKBH7Q9BT30 221 aaPredicted RBP14.38□□□□□ -0.11
PTPRU-203ENST00000415600 ESDP10768 282 aa14.37□□□□□ -0.11
PTPRU-203ENST00000415600 KIR3DS1Q14943 382 aa14.37□□□□□ -0.11
PTPRU-203ENST00000415600 C1orf134Q5TEV5 83 aa14.37□□□□□ -0.11
PTPRU-203ENST00000415600 HIST1H2BLQ99880 126 aa14.37□□□□□ -0.11
PTPRU-203ENST00000415600 RTL8CO15255 209 aa14.36□□□□□ -0.11
PTPRU-203ENST00000415600 SNAI2O43623 268 aa14.36□□□□□ -0.11
PTPRU-203ENST00000415600 OR5AL1P0C617 328 aa14.36□□□□□ -0.11
PTPRU-203ENST00000415600 BAGE3Q86Y29 109 aa14.36□□□□□ -0.11
PTPRU-203ENST00000415600 TRAV12-3A0A0B4J271 114 aa14.35□□□□□ -0.11
PTPRU-203ENST00000415600 C7orf71A4D174 169 aa14.35□□□□□ -0.11
PTPRU-203ENST00000415600 FABP4P15090 132 aa14.35□□□□□ -0.11
PTPRU-203ENST00000415600 NTF3P20783 257 aa14.35□□□□□ -0.11
PTPRU-203ENST00000415600 LINC00310P59036 64 aa14.35□□□□□ -0.11
PTPRU-203ENST00000415600 LINC00518Q8N0U6 118 aa14.35□□□□□ -0.11
PTPRU-203ENST00000415600 C18orf32Q8TCD1 76 aa14.35□□□□□ -0.11
PTPRU-203ENST00000415600 SERF1AO75920 110 aa14.34□□□□□ -0.11
PTPRU-203ENST00000415600 TWIST1Q15672 202 aa14.34□□□□□ -0.11
PTPRU-203ENST00000415600 DNLZQ5SXM8 178 aa14.34□□□□□ -0.11
PTPRU-203ENST00000415600 NAGKQ9UJ70 344 aa14.34□□□□□ -0.11
PTPRU-203ENST00000415600 NUPR1O60356 82 aa14.34□□□□□ -0.11
PTPRU-203ENST00000415600 MED14OSP0DP75 135 aa14.34□□□□□ -0.11
PTPRU-203ENST00000415600 ANXA2RQ3ZCQ2 193 aa14.34□□□□□ -0.11
PTPRU-203ENST00000415600 MUC21A0A0G2JKD1 596 aa14.33□□□□□ -0.12
PTPRU-203ENST00000415600 MUC21A0A140T8X8 626 aa14.33□□□□□ -0.12
PTPRU-203ENST00000415600 A0A1B0GVY2 172 aa14.33□□□□□ -0.12
PTPRU-203ENST00000415600 MUC21Q5SSG8 566 aa14.33□□□□□ -0.12
PTPRU-203ENST00000415600 OR10D4PQ8NGN7 298 aa14.33□□□□□ -0.12
PTPRU-203ENST00000415600 TMEM18Q96B42 140 aa14.33□□□□□ -0.12
PTPRU-203ENST00000415600 TMEM191AQ9H0A3 160 aa14.33□□□□□ -0.12
PTPRU-203ENST00000415600 SMIM6P0DI80 62 aa14.32□□□□□ -0.12
PTPRU-203ENST00000415600 CACNG7P62955 275 aa14.32□□□□□ -0.12
PTPRU-203ENST00000415600 FAM104BQ5XKR9 115 aa14.32□□□□□ -0.12
PTPRU-203ENST00000415600 PACRGQ96M98 296 aaPredicted RBP14.32□□□□□ -0.12
PTPRU-203ENST00000415600 GAGE12BA1L429 117 aa14.31□□□□□ -0.12
PTPRU-203ENST00000415600 ZNF324O75467 553 aaPredicted RBP14.31□□□□□ -0.12
PTPRU-203ENST00000415600 GAGE7O76087 117 aa14.31□□□□□ -0.12
PTPRU-203ENST00000415600 GAGE12FP0CL80 117 aa14.31□□□□□ -0.12
PTPRU-203ENST00000415600 GAGE12GP0CL81 117 aa14.31□□□□□ -0.12
PTPRU-203ENST00000415600 GAGE12IP0CL82 117 aa14.31□□□□□ -0.12
PTPRU-203ENST00000415600 ASIPP42127 132 aa14.31□□□□□ -0.12
PTPRU-203ENST00000415600 DAZ2Q13117 558 aaKnown RBP14.31□□□□□ -0.12
PTPRU-203ENST00000415600 DMRTA1Q5VZB9 504 aa14.31□□□□□ -0.12
PTPRU-203ENST00000415600 LINC00612Q8N6U2 182 aa14.31□□□□□ -0.12
PTPRU-203ENST00000415600 KCNS1Q96KK3 526 aa14.31□□□□□ -0.12
PTPRU-203ENST00000415600 H3BVH4 76 aa14.3□□□□□ -0.12
PTPRU-203ENST00000415600 SSTP61278 116 aa14.3□□□□□ -0.12
PTPRU-203ENST00000415600 IQCJQ1A5X6 159 aa14.3□□□□□ -0.12
PTPRU-203ENST00000415600 OR10AG1Q8NH19 301 aa14.3□□□□□ -0.12
PTPRU-203ENST00000415600 MSRB1Q9NZV6 116 aa14.3□□□□□ -0.12
PTPRU-203ENST00000415600 TRAV26-1A0A087WT03 109 aa14.3□□□□□ -0.12
PTPRU-203ENST00000415600 TDRG1Q3Y452 100 aa14.3□□□□□ -0.12
PTPRU-203ENST00000415600 FAM159AQ6UWV7 190 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms