RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 CSMD3Q7Z407 3707 aa9.39□□□□□ -0.91
CNN3-203ENST00000415017 S100PP25815 95 aa9.38□□□□□ -0.91
CNN3-203ENST00000415017 TWIST1Q15672 202 aa9.38□□□□□ -0.91
CNN3-203ENST00000415017 CBLN2Q8IUK8 224 aa9.38□□□□□ -0.91
CNN3-203ENST00000415017 SAMD10Q9BYL1 202 aa9.38□□□□□ -0.91
CNN3-203ENST00000415017 URGCP-MRPS24S4R325 110 aa9.38□□□□□ -0.91
CNN3-203ENST00000415017 TRGC1P0CF51 173 aa9.37□□□□□ -0.91
CNN3-203ENST00000415017 DEFB130BP0DP73 79 aa9.37□□□□□ -0.91
CNN3-203ENST00000415017 DEFB130AP0DP74 79 aa9.37□□□□□ -0.91
CNN3-203ENST00000415017 EVI2AP22794 236 aa9.37□□□□□ -0.91
CNN3-203ENST00000415017 DAD1P61803 113 aa9.37□□□□□ -0.91
CNN3-203ENST00000415017 HBBP68871 147 aa9.37□□□□□ -0.91
CNN3-203ENST00000415017 FHL2Q14192 279 aa9.37□□□□□ -0.91
CNN3-203ENST00000415017 TMEM88Q6PEY1 159 aa9.37□□□□□ -0.91
CNN3-203ENST00000415017 C11orf45Q8TAV5 145 aa9.37□□□□□ -0.91
CNN3-203ENST00000415017 BORCS7Q96B45 105 aa9.37□□□□□ -0.91
CNN3-203ENST00000415017 ZNF479Q96JC4 524 aa9.37□□□□□ -0.91
CNN3-203ENST00000415017 AP1S3Q96PC3 154 aa9.37□□□□□ -0.91
CNN3-203ENST00000415017 KRTAP3-3Q9BYR6 98 aa9.37□□□□□ -0.91
CNN3-203ENST00000415017 KRTAP3-2Q9BYR7 98 aa9.37□□□□□ -0.91
CNN3-203ENST00000415017 RHODO00212 210 aa9.36□□□□□ -0.91
CNN3-203ENST00000415017 SCO1O75880 301 aa9.36□□□□□ -0.91
CNN3-203ENST00000415017 MRPL54Q6P161 138 aaKnown RBP9.36□□□□□ -0.91
CNN3-203ENST00000415017 FRZBQ92765 325 aa9.36□□□□□ -0.91
CNN3-203ENST00000415017 DPH3P1Q9H4G8 78 aa9.36□□□□□ -0.91
CNN3-203ENST00000415017 TRGV2A0A075B6R0 118 aa9.35□□□□□ -0.91
CNN3-203ENST00000415017 TGIF2-C20orf24A0A0A6YYL0 155 aa9.35□□□□□ -0.91
CNN3-203ENST00000415017 COLCA2A8K830 154 aa9.35□□□□□ -0.91
CNN3-203ENST00000415017 S100A8P05109 93 aa9.35□□□□□ -0.91
CNN3-203ENST00000415017 ATP5G1P05496 136 aa9.35□□□□□ -0.91
CNN3-203ENST00000415017 GATA1P15976 413 aaPredicted RBP9.35□□□□□ -0.91
CNN3-203ENST00000415017 HOXA5P20719 270 aa9.35□□□□□ -0.91
CNN3-203ENST00000415017 NANOS2P60321 138 aaKnown RBP9.35□□□□□ -0.91
CNN3-203ENST00000415017 COX19Q49B96 90 aa9.35□□□□□ -0.91
CNN3-203ENST00000415017 TMEM136Q6ZRR5 245 aa9.35□□□□□ -0.91
CNN3-203ENST00000415017 Q6ZTC4 211 aa9.35□□□□□ -0.91
CNN3-203ENST00000415017 C14orf178Q8N769 122 aaPredicted RBP9.35□□□□□ -0.91
CNN3-203ENST00000415017 OR4C5Q8NGB2 326 aa9.35□□□□□ -0.91
CNN3-203ENST00000415017 RNF185Q96GF1 192 aa9.35□□□□□ -0.91
CNN3-203ENST00000415017 GNB1LQ9BYB4 327 aa9.35□□□□□ -0.91
CNN3-203ENST00000415017 A0A087WWL8 130 aa9.34□□□□□ -0.91
CNN3-203ENST00000415017 IGHV3-53P01767 116 aa9.34□□□□□ -0.91
CNN3-203ENST00000415017 RAB4AP20338 218 aa9.34□□□□□ -0.91
CNN3-203ENST00000415017 CAMPP49913 170 aa9.34□□□□□ -0.91
CNN3-203ENST00000415017 SSTP61278 116 aa9.34□□□□□ -0.91
CNN3-203ENST00000415017 FAM104BQ5XKR9 115 aa9.34□□□□□ -0.91
CNN3-203ENST00000415017 Q6ZSN1 163 aa9.34□□□□□ -0.91
CNN3-203ENST00000415017 RAB4BP61018 213 aa9.33□□□□□ -0.92
CNN3-203ENST00000415017 FAM210BQ96KR6 192 aa9.33□□□□□ -0.92
CNN3-203ENST00000415017 TRBV6-4A0A1B0GX49 114 aa9.32□□□□□ -0.92
CNN3-203ENST00000415017 TRAV10A0A0B4J240 114 aa9.31□□□□□ -0.92
CNN3-203ENST00000415017 H3BNG1 76 aa9.31□□□□□ -0.92
CNN3-203ENST00000415017 M0QY20 66 aa9.31□□□□□ -0.92
CNN3-203ENST00000415017 MT-ND6P03923 174 aa9.31□□□□□ -0.92
CNN3-203ENST00000415017 CRYBA4P53673 196 aa9.31□□□□□ -0.92
CNN3-203ENST00000415017 SLAQ13239 276 aa9.31□□□□□ -0.92
CNN3-203ENST00000415017 SMIM15Q7Z3B0 74 aa9.31□□□□□ -0.92
CNN3-203ENST00000415017 AMN1Q8IY45 258 aa9.31□□□□□ -0.92
CNN3-203ENST00000415017 VSIG2Q96IQ7 327 aa9.31□□□□□ -0.92
CNN3-203ENST00000415017 STARD9Q9P2P6 4700 aa9.3□□□□□ -0.92
CNN3-203ENST00000415017 HLA-DQA1P01909 254 aa9.3□□□□□ -0.92
CNN3-203ENST00000415017 SMIM17P0DL12 118 aa9.3□□□□□ -0.92
CNN3-203ENST00000415017 MRPL51Q4U2R6 128 aaKnown RBP9.3□□□□□ -0.92
CNN3-203ENST00000415017 FAM74A4Q5TZK3 123 aa9.3□□□□□ -0.92
CNN3-203ENST00000415017 SLC25A29Q8N8R3 303 aa9.3□□□□□ -0.92
CNN3-203ENST00000415017 PRO0255Q9UI72 69 aa9.3□□□□□ -0.92
CNN3-203ENST00000415017 HHLA3Q9XRX5 114 aa9.3□□□□□ -0.92
CNN3-203ENST00000415017 DEFB131BA0A096LNP1 70 aa9.29□□□□□ -0.92
CNN3-203ENST00000415017 IGHV3-73A0A0B4J1V6 119 aa9.29□□□□□ -0.92
CNN3-203ENST00000415017 TRBV10-1A0A0K0K1A3 114 aa9.29□□□□□ -0.92
CNN3-203ENST00000415017 PHOX2AO14813 284 aa9.29□□□□□ -0.92
CNN3-203ENST00000415017 LINC00694P0DN24 101 aa9.29□□□□□ -0.92
CNN3-203ENST00000415017 SUMO4Q6EEV6 95 aa9.29□□□□□ -0.92
CNN3-203ENST00000415017 MRAP2Q96G30 205 aa9.29□□□□□ -0.92
CNN3-203ENST00000415017 Q9UF83 564 aa9.29□□□□□ -0.92
CNN3-203ENST00000415017 PLECQ15149 4684 aaKnown RBP9.29□□□□□ -0.92
CNN3-203ENST00000415017 TENM2Q9NT68 2774 aa9.29□□□□□ -0.92
CNN3-203ENST00000415017 TRGV4A0A0C4DH28 118 aa9.28□□□□□ -0.92
CNN3-203ENST00000415017 TRBV6-5A0A0K0K1A5 114 aa9.28□□□□□ -0.92
CNN3-203ENST00000415017 GAS8-AS1O95177 125 aa9.28□□□□□ -0.92
CNN3-203ENST00000415017 NRACQ8N912 160 aa9.28□□□□□ -0.92
CNN3-203ENST00000415017 PHLDA1Q8WV24 401 aaPredicted RBP9.28□□□□□ -0.92
CNN3-203ENST00000415017 F5H768 121 aa9.27□□□□□ -0.93
CNN3-203ENST00000415017 K7EQD1 137 aa9.27□□□□□ -0.93
CNN3-203ENST00000415017 PPBPP02775 128 aa9.27□□□□□ -0.93
CNN3-203ENST00000415017 RAB5AP20339 215 aa9.27□□□□□ -0.93
CNN3-203ENST00000415017 RHOHQ15669 191 aa9.27□□□□□ -0.93
CNN3-203ENST00000415017 ZNF56Q15929 161 aa9.27□□□□□ -0.93
CNN3-203ENST00000415017 TRAV26-2A0A0B4J265 109 aa9.26□□□□□ -0.93
CNN3-203ENST00000415017 PRSS47A8MTI9 375 aa9.26□□□□□ -0.93
CNN3-203ENST00000415017 H7C1H1 209 aa9.26□□□□□ -0.93
CNN3-203ENST00000415017 MGPP08493 103 aa9.26□□□□□ -0.93
CNN3-203ENST00000415017 DNAJC30Q96LL9 226 aa9.26□□□□□ -0.93
CNN3-203ENST00000415017 WWC2-AS2Q96NR7 200 aa9.26□□□□□ -0.93
CNN3-203ENST00000415017 MRPL18Q9H0U6 180 aaKnown RBP9.26□□□□□ -0.93
CNN3-203ENST00000415017 NIT2Q9NQR4 276 aa9.26□□□□□ -0.93
CNN3-203ENST00000415017 TRAV26-1A0A087WT03 109 aa9.25□□□□□ -0.93
CNN3-203ENST00000415017 F5H697 171 aa9.25□□□□□ -0.93
CNN3-203ENST00000415017 APCSP02743 223 aa9.25□□□□□ -0.93
CNN3-203ENST00000415017 P0DMU3 169 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms