RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 FOXA3P55318 350 aaPredicted RBP11.44□□□□□ -0.58
LINC00398-201ENST00000414407 CCL18P55774 89 aa11.44□□□□□ -0.58
LINC00398-201ENST00000414407 RHOHQ15669 191 aa11.44□□□□□ -0.58
LINC00398-201ENST00000414407 LYZL1Q6UWQ5 148 aa11.44□□□□□ -0.58
LINC00398-201ENST00000414407 SLC25A29Q8N8R3 303 aa11.44□□□□□ -0.58
LINC00398-201ENST00000414407 PRADC1Q9BSG0 188 aa11.44□□□□□ -0.58
LINC00398-201ENST00000414407 TPPP3Q9BW30 176 aa11.44□□□□□ -0.58
LINC00398-201ENST00000414407 CNFNQ9BYD5 112 aa11.44□□□□□ -0.58
LINC00398-201ENST00000414407 DNAH1Q9P2D7 4330 aa11.44□□□□□ -0.58
LINC00398-201ENST00000414407 FAM231BA6NCW3 169 aa11.43□□□□□ -0.58
LINC00398-201ENST00000414407 K7EQD1 137 aa11.43□□□□□ -0.58
LINC00398-201ENST00000414407 GYPEP15421 78 aa11.43□□□□□ -0.58
LINC00398-201ENST00000414407 ADIRFQ15847 76 aa11.43□□□□□ -0.58
LINC00398-201ENST00000414407 SH2D6Q7Z4S9 175 aa11.43□□□□□ -0.58
LINC00398-201ENST00000414407 UBE2DNLQ8IWF7 75 aa11.43□□□□□ -0.58
LINC00398-201ENST00000414407 GFRA4Q9GZZ7 299 aa11.43□□□□□ -0.58
LINC00398-201ENST00000414407 RYR3Q15413 4870 aa11.42□□□□□ -0.58
LINC00398-201ENST00000414407 A0A087WWL8 130 aa11.42□□□□□ -0.58
LINC00398-201ENST00000414407 MUC21A0A0G2JKD1 596 aa11.42□□□□□ -0.58
LINC00398-201ENST00000414407 MUC21A0A140T8X8 626 aa11.42□□□□□ -0.58
LINC00398-201ENST00000414407 FAM74A4Q5TZK3 123 aa11.42□□□□□ -0.58
LINC00398-201ENST00000414407 TSKUQ8WUA8 353 aa11.42□□□□□ -0.58
LINC00398-201ENST00000414407 AP1S3Q96PC3 154 aa11.42□□□□□ -0.58
LINC00398-201ENST00000414407 SRIP30626 198 aa11.41□□□□□ -0.58
LINC00398-201ENST00000414407 NEGR1Q7Z3B1 354 aa11.41□□□□□ -0.58
LINC00398-201ENST00000414407 OR10G8Q8NGN5 311 aa11.41□□□□□ -0.58
LINC00398-201ENST00000414407 GTSF1Q8WW33 167 aa11.41□□□□□ -0.58
LINC00398-201ENST00000414407 V9GYV3 84 aa11.41□□□□□ -0.58
LINC00398-201ENST00000414407 HYDINQ4G0P3 5121 aa11.41□□□□□ -0.58
LINC00398-201ENST00000414407 NTF3P20783 257 aa11.4□□□□□ -0.58
LINC00398-201ENST00000414407 PNRC1Q12796 327 aaPredicted RBP11.4□□□□□ -0.58
LINC00398-201ENST00000414407 ESRGQ1W209 222 aa11.4□□□□□ -0.58
LINC00398-201ENST00000414407 Q6ZSN1 163 aa11.4□□□□□ -0.58
LINC00398-201ENST00000414407 LINC00588Q9Y4M8 146 aa11.4□□□□□ -0.58
LINC00398-201ENST00000414407 KIF25-AS1Q9Y6Z4 181 aa11.4□□□□□ -0.58
LINC00398-201ENST00000414407 VPS13DQ5THJ4 4388 aa11.4□□□□□ -0.58
LINC00398-201ENST00000414407 LINC00862A6NCI5 91 aa11.39□□□□□ -0.59
LINC00398-201ENST00000414407 TRGC1P0CF51 173 aa11.39□□□□□ -0.59
LINC00398-201ENST00000414407 SMIM17P0DL12 118 aa11.39□□□□□ -0.59
LINC00398-201ENST00000414407 RAB4BP61018 213 aa11.39□□□□□ -0.59
LINC00398-201ENST00000414407 SSTP61278 116 aa11.39□□□□□ -0.59
LINC00398-201ENST00000414407 C14orf178Q8N769 122 aaPredicted RBP11.39□□□□□ -0.59
LINC00398-201ENST00000414407 MSRB1Q9NZV6 116 aa11.39□□□□□ -0.59
LINC00398-201ENST00000414407 TRBV10-1A0A0K0K1A3 114 aa11.38□□□□□ -0.59
LINC00398-201ENST00000414407 LOC100131303A0A0U1RQF7 123 aa11.38□□□□□ -0.59
LINC00398-201ENST00000414407 TIRAPP58753 221 aa11.38□□□□□ -0.59
LINC00398-201ENST00000414407 LYPD5Q6UWN5 251 aa11.38□□□□□ -0.59
LINC00398-201ENST00000414407 UPK3BQ9BT76 320 aa11.38□□□□□ -0.59
LINC00398-201ENST00000414407 MRPS16Q9Y3D3 137 aaKnown RBP11.38□□□□□ -0.59
LINC00398-201ENST00000414407 TMEM218A2RU14 115 aa11.37□□□□□ -0.59
LINC00398-201ENST00000414407 LINC00315P59091 139 aa11.37□□□□□ -0.59
LINC00398-201ENST00000414407 TWIST1Q15672 202 aa11.37□□□□□ -0.59
LINC00398-201ENST00000414407 COMMD7Q86VX2 200 aa11.37□□□□□ -0.59
LINC00398-201ENST00000414407 ZNRF2Q8NHG8 242 aa11.37□□□□□ -0.59
LINC00398-201ENST00000414407 HIGD1CA8MV81 97 aa11.36□□□□□ -0.59
LINC00398-201ENST00000414407 ZNF56Q15929 161 aa11.36□□□□□ -0.59
LINC00398-201ENST00000414407 BORCS7Q96B45 105 aa11.36□□□□□ -0.59
LINC00398-201ENST00000414407 PGLYRP4Q96LB8 373 aa11.36□□□□□ -0.59
LINC00398-201ENST00000414407 DPH3P1Q9H4G8 78 aa11.36□□□□□ -0.59
LINC00398-201ENST00000414407 PPP1R2P9O14990 202 aa11.35□□□□□ -0.59
LINC00398-201ENST00000414407 LINC00694P0DN24 101 aa11.35□□□□□ -0.59
LINC00398-201ENST00000414407 EVI2AP22794 236 aa11.35□□□□□ -0.59
LINC00398-201ENST00000414407 NAT8BQ9UHF3 227 aa11.35□□□□□ -0.59
LINC00398-201ENST00000414407 A0A1B0GUT8 65 aa11.34□□□□□ -0.59
LINC00398-201ENST00000414407 SMIM27A0A1W2PRY6 76 aa11.34□□□□□ -0.59
LINC00398-201ENST00000414407 F5H697 171 aa11.34□□□□□ -0.59
LINC00398-201ENST00000414407 SMIM15Q7Z3B0 74 aa11.34□□□□□ -0.59
LINC00398-201ENST00000414407 ATP6V0E2Q8NHE4 81 aa11.34□□□□□ -0.59
LINC00398-201ENST00000414407 GAGE12JA6NER3 117 aa11.33□□□□□ -0.6
LINC00398-201ENST00000414407 RPL36AP83881 106 aaKnown RBP11.33□□□□□ -0.6
LINC00398-201ENST00000414407 GAGE1Q13065 139 aa11.33□□□□□ -0.6
LINC00398-201ENST00000414407 GAGE4Q13068 117 aa11.33□□□□□ -0.6
LINC00398-201ENST00000414407 GAGE5Q13069 117 aa11.33□□□□□ -0.6
LINC00398-201ENST00000414407 GAGE13Q4V321 117 aa11.33□□□□□ -0.6
LINC00398-201ENST00000414407 NUP35Q8NFH5 326 aa11.33□□□□□ -0.6
LINC00398-201ENST00000414407 RPL36ALQ969Q0 106 aaKnown RBP11.33□□□□□ -0.6
LINC00398-201ENST00000414407 SEC11CQ9BY50 192 aa11.33□□□□□ -0.6
LINC00398-201ENST00000414407 Q9H8V8 135 aa11.33□□□□□ -0.6
LINC00398-201ENST00000414407 Q9UF83 564 aa11.33□□□□□ -0.6
LINC00398-201ENST00000414407 F8W036 122 aa11.32□□□□□ -0.6
LINC00398-201ENST00000414407 H7C1H1 209 aa11.32□□□□□ -0.6
LINC00398-201ENST00000414407 MT-ND4LP03901 98 aa11.32□□□□□ -0.6
LINC00398-201ENST00000414407 ADCYAP1P18509 176 aa11.32□□□□□ -0.6
LINC00398-201ENST00000414407 ANAPC16Q96DE5 110 aa11.32□□□□□ -0.6
LINC00398-201ENST00000414407 GTSF1LQ9H1H1 148 aa11.32□□□□□ -0.6
LINC00398-201ENST00000414407 TRBV7-3A0A075B6L6 115 aa11.31□□□□□ -0.6
LINC00398-201ENST00000414407 MGPP08493 103 aa11.31□□□□□ -0.6
LINC00398-201ENST00000414407 RIGQ13278 110 aa11.31□□□□□ -0.6
LINC00398-201ENST00000414407 KMT2AQ03164 3969 aa11.3□□□□□ -0.6
LINC00398-201ENST00000414407 M0QY20 66 aa11.3□□□□□ -0.6
LINC00398-201ENST00000414407 UBE2D3P61077 147 aa11.3□□□□□ -0.6
LINC00398-201ENST00000414407 UBE2D2P62837 147 aa11.3□□□□□ -0.6
LINC00398-201ENST00000414407 SUMO4Q6EEV6 95 aa11.3□□□□□ -0.6
LINC00398-201ENST00000414407 Q6ZR54 194 aa11.3□□□□□ -0.6
LINC00398-201ENST00000414407 NEXN-AS1Q8NBZ9 246 aa11.3□□□□□ -0.6
LINC00398-201ENST00000414407 FRZBQ92765 325 aa11.3□□□□□ -0.6
LINC00398-201ENST00000414407 IGLV2-18A0A075B6J9 118 aa11.29□□□□□ -0.6
LINC00398-201ENST00000414407 A0A1B0GW15 77 aa11.29□□□□□ -0.6
LINC00398-201ENST00000414407 SIVA1O15304 175 aa11.29□□□□□ -0.6
LINC00398-201ENST00000414407 C10orf91Q5T1B1 145 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms