RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 OR10AG1Q8NH19 301 aa12.13□□□□□ -0.47
SCAMP4-204ENST00000414057 LINC01587Q99440 93 aa12.13□□□□□ -0.47
SCAMP4-204ENST00000414057 TMEM191AQ9H0A3 160 aa12.13□□□□□ -0.47
SCAMP4-204ENST00000414057 TP53TG3Q9ULZ0 132 aa12.13□□□□□ -0.47
SCAMP4-204ENST00000414057 TRAV10A0A0B4J240 114 aa12.12□□□□□ -0.47
SCAMP4-204ENST00000414057 NXPH4O95158 308 aa12.12□□□□□ -0.47
SCAMP4-204ENST00000414057 ZFP82Q8N141 532 aa12.12□□□□□ -0.47
SCAMP4-204ENST00000414057 C9orf85Q96MD7 179 aa12.12□□□□□ -0.47
SCAMP4-204ENST00000414057 TMEM208Q9BTX3 173 aa12.12□□□□□ -0.47
SCAMP4-204ENST00000414057 GOLT1BQ9Y3E0 138 aa12.12□□□□□ -0.47
SCAMP4-204ENST00000414057 IGLL5B9A064 214 aa12.11□□□□□ -0.47
SCAMP4-204ENST00000414057 S100A6P06703 90 aa12.11□□□□□ -0.47
SCAMP4-204ENST00000414057 SLAQ13239 276 aa12.11□□□□□ -0.47
SCAMP4-204ENST00000414057 BIRC6Q9NR09 4857 aa12.11□□□□□ -0.47
SCAMP4-204ENST00000414057 DMRTA1Q5VZB9 504 aa12.1□□□□□ -0.47
SCAMP4-204ENST00000414057 SMIM9A6NGZ8 99 aa12.09□□□□□ -0.47
SCAMP4-204ENST00000414057 ZNF415Q09FC8 603 aa12.09□□□□□ -0.47
SCAMP4-204ENST00000414057 FAM104BQ5XKR9 115 aa12.09□□□□□ -0.47
SCAMP4-204ENST00000414057 C1orf158Q8N1D5 194 aa12.09□□□□□ -0.47
SCAMP4-204ENST00000414057 SYT8Q8NBV8 401 aa12.09□□□□□ -0.47
SCAMP4-204ENST00000414057 MUC21A0A0G2JKD1 596 aa12.08□□□□□ -0.47
SCAMP4-204ENST00000414057 MUC21A0A140T8X8 626 aa12.08□□□□□ -0.47
SCAMP4-204ENST00000414057 PIK3CD-AS1Q5SR53 167 aa12.08□□□□□ -0.47
SCAMP4-204ENST00000414057 ZNF705AQ6ZN79 300 aaPredicted RBP12.08□□□□□ -0.47
SCAMP4-204ENST00000414057 Q6ZTC4 211 aa12.08□□□□□ -0.47
SCAMP4-204ENST00000414057 PTH2Q96A98 100 aa12.08□□□□□ -0.47
SCAMP4-204ENST00000414057 TIMM8BQ9Y5J9 83 aaPredicted RBP12.08□□□□□ -0.47
SCAMP4-204ENST00000414057 M0R381 172 aa12.08□□□□□ -0.48
SCAMP4-204ENST00000414057 AP1S3Q96PC3 154 aa12.08□□□□□ -0.48
SCAMP4-204ENST00000414057 SPXQ9BT56 116 aa12.08□□□□□ -0.48
SCAMP4-204ENST00000414057 NDUFAF3Q9BU61 184 aa12.08□□□□□ -0.48
SCAMP4-204ENST00000414057 MSRB1Q9NZV6 116 aa12.08□□□□□ -0.48
SCAMP4-204ENST00000414057 MDFICQ9P1T7 246 aa12.08□□□□□ -0.48
SCAMP4-204ENST00000414057 APLNQ9ULZ1 77 aa12.08□□□□□ -0.48
SCAMP4-204ENST00000414057 SSTP61278 116 aa12.07□□□□□ -0.48
SCAMP4-204ENST00000414057 OR10J3Q5JRS4 329 aa12.07□□□□□ -0.48
SCAMP4-204ENST00000414057 TEX48A0A1B0GUV7 120 aa12.06□□□□□ -0.48
SCAMP4-204ENST00000414057 PPBPP02775 128 aa12.06□□□□□ -0.48
SCAMP4-204ENST00000414057 SPART-AS1P0CW21 52 aa12.06□□□□□ -0.48
SCAMP4-204ENST00000414057 HTN1P15515 57 aa12.06□□□□□ -0.48
SCAMP4-204ENST00000414057 Q0VG73 95 aa12.06□□□□□ -0.48
SCAMP4-204ENST00000414057 COA6Q5JTJ3 125 aaKnown RBP12.06□□□□□ -0.48
SCAMP4-204ENST00000414057 TMEM263Q8WUH6 116 aaKnown RBP12.06□□□□□ -0.48
SCAMP4-204ENST00000414057 IGHV3OR16-12A0A075B7B8 117 aa12.05□□□□□ -0.48
SCAMP4-204ENST00000414057 DEFB131BA0A096LNP1 70 aa12.05□□□□□ -0.48
SCAMP4-204ENST00000414057 SRIP30626 198 aa12.05□□□□□ -0.48
SCAMP4-204ENST00000414057 KMT2AQ03164 3969 aa12.05□□□□□ -0.48
SCAMP4-204ENST00000414057 KIAA1644Q3SXP7 199 aa12.05□□□□□ -0.48
SCAMP4-204ENST00000414057 C11orf72Q8NBR9 251 aa12.05□□□□□ -0.48
SCAMP4-204ENST00000414057 ALKBH7Q9BT30 221 aaPredicted RBP12.05□□□□□ -0.48
SCAMP4-204ENST00000414057 DPH3P1Q9H4G8 78 aa12.05□□□□□ -0.48
SCAMP4-204ENST00000414057 NDUFA6P56556 154 aa12.04□□□□□ -0.48
SCAMP4-204ENST00000414057 C12orf74Q32Q52 190 aa12.04□□□□□ -0.48
SCAMP4-204ENST00000414057 AMN1Q8IY45 258 aa12.04□□□□□ -0.48
SCAMP4-204ENST00000414057 C16orf74Q96GX8 76 aa12.04□□□□□ -0.48
SCAMP4-204ENST00000414057 CELA1Q9UNI1 258 aa12.04□□□□□ -0.48
SCAMP4-204ENST00000414057 C5orf52A6NGY3 159 aa12.03□□□□□ -0.48
SCAMP4-204ENST00000414057 M0R2P5 195 aa12.03□□□□□ -0.48
SCAMP4-204ENST00000414057 SMIM17P0DL12 118 aa12.03□□□□□ -0.48
SCAMP4-204ENST00000414057 RAB4AP20338 218 aa12.03□□□□□ -0.48
SCAMP4-204ENST00000414057 EVI2AP22794 236 aa12.03□□□□□ -0.48
SCAMP4-204ENST00000414057 ORMDL3Q8N138 153 aa12.03□□□□□ -0.48
SCAMP4-204ENST00000414057 RNASE8Q8TDE3 154 aaKnown RBP12.03□□□□□ -0.48
SCAMP4-204ENST00000414057 LAMTOR2Q9Y2Q5 125 aa12.03□□□□□ -0.48
SCAMP4-204ENST00000414057 ZNF876PQ49A33 203 aa12.02□□□□□ -0.48
SCAMP4-204ENST00000414057 MRPL51Q4U2R6 128 aaKnown RBP12.02□□□□□ -0.48
SCAMP4-204ENST00000414057 RNF185Q96GF1 192 aa12.02□□□□□ -0.48
SCAMP4-204ENST00000414057 MUC4Q99102 2169 aa12.02□□□□□ -0.49
SCAMP4-204ENST00000414057 EMP1P54849 157 aa12.02□□□□□ -0.49
SCAMP4-204ENST00000414057 SNRPEP62304 92 aaKnown RBP12.02□□□□□ -0.49
SCAMP4-204ENST00000414057 RRN3P1Q2M238 152 aa12.02□□□□□ -0.49
SCAMP4-204ENST00000414057 MRAP2Q96G30 205 aa12.02□□□□□ -0.49
SCAMP4-204ENST00000414057 GSN-AS1Q9NRJ2 163 aa12.02□□□□□ -0.49
SCAMP4-204ENST00000414057 CKS2P33552 79 aa12.01□□□□□ -0.49
SCAMP4-204ENST00000414057 POM121L12Q8N7R1 296 aa12.01□□□□□ -0.49
SCAMP4-204ENST00000414057 C18orf32Q8TCD1 76 aa12.01□□□□□ -0.49
SCAMP4-204ENST00000414057 A8MWV9 139 aa12□□□□□ -0.49
SCAMP4-204ENST00000414057 D6R8Y8 96 aa12□□□□□ -0.49
SCAMP4-204ENST00000414057 P0DMU3 169 aa12□□□□□ -0.49
SCAMP4-204ENST00000414057 FAM231AP0DMU4 169 aa12□□□□□ -0.49
SCAMP4-204ENST00000414057 FAM231CP0DMU5 169 aa12□□□□□ -0.49
SCAMP4-204ENST00000414057 HOXA5P20719 270 aa12□□□□□ -0.49
SCAMP4-204ENST00000414057 LGALS9BQ3B8N2 356 aa12□□□□□ -0.49
SCAMP4-204ENST00000414057 BAGE3Q86Y29 109 aa12□□□□□ -0.49
SCAMP4-204ENST00000414057 C14orf178Q8N769 122 aaPredicted RBP12□□□□□ -0.49
SCAMP4-204ENST00000414057 PRELID3AQ96N28 172 aa12□□□□□ -0.49
SCAMP4-204ENST00000414057 AZU1P20160 251 aa11.99□□□□□ -0.49
SCAMP4-204ENST00000414057 DAZ2Q13117 558 aaKnown RBP11.99□□□□□ -0.49
SCAMP4-204ENST00000414057 RASL10AQ92737 203 aa11.99□□□□□ -0.49
SCAMP4-204ENST00000414057 DKK2Q9UBU2 259 aa11.99□□□□□ -0.49
SCAMP4-204ENST00000414057 KIF25-AS1Q9Y6Z4 181 aa11.99□□□□□ -0.49
SCAMP4-204ENST00000414057 PPP1R17O96001 155 aa11.98□□□□□ -0.49
SCAMP4-204ENST00000414057 PRM2P04554 102 aa11.97□□□□□ -0.49
SCAMP4-204ENST00000414057 ESDP10768 282 aa11.97□□□□□ -0.49
SCAMP4-204ENST00000414057 FAM222AQ5U5X8 452 aa11.97□□□□□ -0.49
SCAMP4-204ENST00000414057 RHODO00212 210 aa11.96□□□□□ -0.49
SCAMP4-204ENST00000414057 VPS13DQ5THJ4 4388 aa11.96□□□□□ -0.5
SCAMP4-204ENST00000414057 LOC105371267A0A1B0GV96 52 aa11.95□□□□□ -0.5
SCAMP4-204ENST00000414057 CRYGDP07320 174 aa11.95□□□□□ -0.5
SCAMP4-204ENST00000414057 MGPP08493 103 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms