RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 PCDH15Q96QU1 1955 aa13.25□□□□□ -0.29
PHRF1-202ENST00000413872 LGALS9O00182 355 aa13.25□□□□□ -0.29
PHRF1-202ENST00000413872 IGLL1P15814 213 aa13.25□□□□□ -0.29
PHRF1-202ENST00000413872 ZNF124Q15973 351 aa13.25□□□□□ -0.29
PHRF1-202ENST00000413872 MRPL36Q9P0J6 103 aaKnown RBP13.25□□□□□ -0.29
PHRF1-202ENST00000413872 UBE2BP63146 152 aa13.25□□□□□ -0.29
PHRF1-202ENST00000413872 TRBV7-3A0A075B6L6 115 aa13.25□□□□□ -0.29
PHRF1-202ENST00000413872 EBI3Q14213 229 aa13.25□□□□□ -0.29
PHRF1-202ENST00000413872 GAGE2AQ6NT46 116 aa13.25□□□□□ -0.29
PHRF1-202ENST00000413872 UNQ9165/PRO28630Q6UXU0 137 aa13.25□□□□□ -0.29
PHRF1-202ENST00000413872 HHLA3Q9XRX5 114 aa13.25□□□□□ -0.29
PHRF1-202ENST00000413872 DEFB135Q30KP9 77 aa13.24□□□□□ -0.29
PHRF1-202ENST00000413872 C22orf34Q6ZV56 151 aa13.24□□□□□ -0.29
PHRF1-202ENST00000413872 TMEM263Q8WUH6 116 aaKnown RBP13.24□□□□□ -0.29
PHRF1-202ENST00000413872 TM2D2Q9BX73 214 aa13.24□□□□□ -0.29
PHRF1-202ENST00000413872 PRSS47A8MTI9 375 aa13.24□□□□□ -0.29
PHRF1-202ENST00000413872 ZFP2Q6ZN57 461 aa13.24□□□□□ -0.29
PHRF1-202ENST00000413872 EDA2RQ9HAV5 297 aa13.23□□□□□ -0.29
PHRF1-202ENST00000413872 COX11Q9Y6N1 276 aa13.23□□□□□ -0.29
PHRF1-202ENST00000413872 SONP18583 2426 aaKnown RBP13.23□□□□□ -0.29
PHRF1-202ENST00000413872 COX7A2LO14548 114 aa13.23□□□□□ -0.29
PHRF1-202ENST00000413872 RPL39LQ96EH5 51 aaKnown RBP13.23□□□□□ -0.29
PHRF1-202ENST00000413872 DKK2Q9UBU2 259 aa13.23□□□□□ -0.29
PHRF1-202ENST00000413872 LINC01545Q5VT33 79 aa13.23□□□□□ -0.29
PHRF1-202ENST00000413872 ANAPC13Q9BS18 74 aa13.23□□□□□ -0.29
PHRF1-202ENST00000413872 CTRLP40313 264 aa13.22□□□□□ -0.29
PHRF1-202ENST00000413872 CCDC140Q96MF4 163 aa13.22□□□□□ -0.29
PHRF1-202ENST00000413872 Q9H8V8 135 aa13.22□□□□□ -0.29
PHRF1-202ENST00000413872 FGF6P10767 208 aa13.22□□□□□ -0.29
PHRF1-202ENST00000413872 ZFAND6Q6FIF0 208 aa13.22□□□□□ -0.29
PHRF1-202ENST00000413872 CAMK2N2Q96S95 79 aa13.22□□□□□ -0.29
PHRF1-202ENST00000413872 TRBV12-3P01733 135 aa13.22□□□□□ -0.29
PHRF1-202ENST00000413872 ODF3Q96PU9 254 aa13.22□□□□□ -0.29
PHRF1-202ENST00000413872 MAP6D1Q9H9H5 199 aa13.22□□□□□ -0.29
PHRF1-202ENST00000413872 GATA1P15976 413 aaPredicted RBP13.22□□□□□ -0.29
PHRF1-202ENST00000413872 RPL32P62910 135 aaKnown RBP13.22□□□□□ -0.29
PHRF1-202ENST00000413872 NCOR2Q9Y618 2525 aa13.21□□□□□ -0.29
PHRF1-202ENST00000413872 OCIAD2Q56VL3 154 aa13.21□□□□□ -0.29
PHRF1-202ENST00000413872 AMTNQ6UX39 209 aa13.21□□□□□ -0.29
PHRF1-202ENST00000413872 CHD3Q12873 2000 aaKnown RBP13.21□□□□□ -0.29
PHRF1-202ENST00000413872 F8W735 103 aaPredicted RBP13.21□□□□□ -0.29
PHRF1-202ENST00000413872 C5orf38Q86SI9 138 aa13.21□□□□□ -0.29
PHRF1-202ENST00000413872 CEND1Q8N111 149 aa13.21□□□□□ -0.29
PHRF1-202ENST00000413872 C9orf118A6NHY6 69 aa13.21□□□□□ -0.3
PHRF1-202ENST00000413872 IFITM1P13164 125 aa13.21□□□□□ -0.3
PHRF1-202ENST00000413872 PROP1O75360 226 aa13.2□□□□□ -0.3
PHRF1-202ENST00000413872 TRBV10-1A0A0K0K1A3 114 aa13.2□□□□□ -0.3
PHRF1-202ENST00000413872 SPRY2O43597 315 aa13.2□□□□□ -0.3
PHRF1-202ENST00000413872 MUC22E2RYF6 1773 aaPredicted RBP13.2□□□□□ -0.3
PHRF1-202ENST00000413872 MSRB1Q9NZV6 116 aa13.2□□□□□ -0.3
PHRF1-202ENST00000413872 C11orf1Q9H5F2 150 aa13.2□□□□□ -0.3
PHRF1-202ENST00000413872 PRO0255Q9UI72 69 aa13.2□□□□□ -0.3
PHRF1-202ENST00000413872 NAV2Q8IVL1 2488 aa13.19□□□□□ -0.3
PHRF1-202ENST00000413872 SHISA2Q6UWI4 295 aa13.19□□□□□ -0.3
PHRF1-202ENST00000413872 IGKV1D-37A0A075B6S9 117 aa13.19□□□□□ -0.3
PHRF1-202ENST00000413872 COA6Q5JTJ3 125 aaKnown RBP13.19□□□□□ -0.3
PHRF1-202ENST00000413872 RBMY1FQ15415 496 aaKnown RBP13.18□□□□□ -0.3
PHRF1-202ENST00000413872 UTF1Q5T230 341 aa13.18□□□□□ -0.3
PHRF1-202ENST00000413872 BVES-AS1Q5T3Y7 98 aa13.18□□□□□ -0.3
PHRF1-202ENST00000413872 UBL5Q9BZL1 73 aa13.18□□□□□ -0.3
PHRF1-202ENST00000413872 IGHV3-30P01768 117 aa13.18□□□□□ -0.3
PHRF1-202ENST00000413872 IGHV3-33P01772 117 aa13.18□□□□□ -0.3
PHRF1-202ENST00000413872 IGHV3-30-3P0DP02 117 aa13.18□□□□□ -0.3
PHRF1-202ENST00000413872 IGHV3-30-5P0DP03 117 aa13.18□□□□□ -0.3
PHRF1-202ENST00000413872 MED12LQ86YW9 2145 aa13.18□□□□□ -0.3
PHRF1-202ENST00000413872 DSCAMO60469 2012 aa13.18□□□□□ -0.3
PHRF1-202ENST00000413872 LY6LH3BQJ8 138 aa13.17□□□□□ -0.3
PHRF1-202ENST00000413872 TRAV4A0A0B4J268 109 aa13.17□□□□□ -0.3
PHRF1-202ENST00000413872 SMIM9A6NGZ8 99 aa13.17□□□□□ -0.3
PHRF1-202ENST00000413872 INAFM1C9JVW0 142 aa13.17□□□□□ -0.3
PHRF1-202ENST00000413872 Q6ZVH6 145 aa13.17□□□□□ -0.3
PHRF1-202ENST00000413872 DSCR8Q96T75 97 aa13.17□□□□□ -0.3
PHRF1-202ENST00000413872 TIMM17AQ99595 171 aa13.16□□□□□ -0.3
PHRF1-202ENST00000413872 CXCL5P42830 114 aa13.16□□□□□ -0.3
PHRF1-202ENST00000413872 CEP192Q8TEP8 1941 aa13.16□□□□□ -0.3
PHRF1-202ENST00000413872 GTSF1Q8WW33 167 aa13.16□□□□□ -0.3
PHRF1-202ENST00000413872 CRYGBP07316 175 aa13.16□□□□□ -0.3
PHRF1-202ENST00000413872 LINC01548A6NM66 108 aa13.15□□□□□ -0.3
PHRF1-202ENST00000413872 PLA2G2EQ9NZK7 142 aa13.15□□□□□ -0.3
PHRF1-202ENST00000413872 NAV3Q8IVL0 2385 aa13.15□□□□□ -0.31
PHRF1-202ENST00000413872 K7EQG2 157 aa13.15□□□□□ -0.31
PHRF1-202ENST00000413872 TRAV12-1A0A0B4J245 112 aa13.14□□□□□ -0.31
PHRF1-202ENST00000413872 A0A0J9YXV3 536 aa13.14□□□□□ -0.31
PHRF1-202ENST00000413872 NDUFA1O15239 70 aa13.14□□□□□ -0.31
PHRF1-202ENST00000413872 DEFB125Q8N687 156 aa13.14□□□□□ -0.31
PHRF1-202ENST00000413872 WNK1Q9H4A3 2382 aa13.14□□□□□ -0.31
PHRF1-202ENST00000413872 BRWD1-AS2P59051 145 aa13.14□□□□□ -0.31
PHRF1-202ENST00000413872 RPL18AQ02543 176 aaKnown RBP13.14□□□□□ -0.31
PHRF1-202ENST00000413872 Q6ZSV7 163 aa13.14□□□□□ -0.31
PHRF1-202ENST00000413872 PPDPFLQ8WWR9 84 aa13.14□□□□□ -0.31
PHRF1-202ENST00000413872 DEFB114Q30KQ6 69 aa13.14□□□□□ -0.31
PHRF1-202ENST00000413872 ETDCA0A1B0GVM5 59 aa13.14□□□□□ -0.31
PHRF1-202ENST00000413872 IGLV10-54A0A075B6I4 117 aa13.13□□□□□ -0.31
PHRF1-202ENST00000413872 F8W1H4 67 aa13.13□□□□□ -0.31
PHRF1-202ENST00000413872 CRIP3Q6Q6R5 217 aa13.13□□□□□ -0.31
PHRF1-202ENST00000413872 COX7B2Q8TF08 81 aa13.13□□□□□ -0.31
PHRF1-202ENST00000413872 ESM1Q9NQ30 184 aa13.13□□□□□ -0.31
PHRF1-202ENST00000413872 ALPK3Q96L96 1907 aa13.13□□□□□ -0.31
PHRF1-202ENST00000413872 TNCP24821 2201 aa13.13□□□□□ -0.31
PHRF1-202ENST00000413872 NUP210LQ5VU65 1888 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms