RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 URGCP-MRPS24S4R325 110 aa13.26□□□□□ -0.29
CDC42-204ENST00000411827 MUC4Q99102 2169 aa13.25□□□□□ -0.29
CDC42-204ENST00000411827 GATD1Q8NB37 220 aa13.25□□□□□ -0.29
CDC42-204ENST00000411827 MUC21A0A0G2JKD1 596 aa13.24□□□□□ -0.29
CDC42-204ENST00000411827 MUC21A0A140T8X8 626 aa13.24□□□□□ -0.29
CDC42-204ENST00000411827 ELOBQ15370 118 aa13.24□□□□□ -0.29
CDC42-204ENST00000411827 C12orf74Q32Q52 190 aa13.24□□□□□ -0.29
CDC42-204ENST00000411827 MRPL54Q6P161 138 aaKnown RBP13.24□□□□□ -0.29
CDC42-204ENST00000411827 MT-ND6P03923 174 aa13.23□□□□□ -0.29
CDC42-204ENST00000411827 CRYGDP07320 174 aa13.23□□□□□ -0.29
CDC42-204ENST00000411827 MSRB1Q9NZV6 116 aa13.23□□□□□ -0.29
CDC42-204ENST00000411827 TENM3Q9P273 2699 aa13.23□□□□□ -0.29
CDC42-204ENST00000411827 EVI2AP22794 236 aa13.22□□□□□ -0.29
CDC42-204ENST00000411827 CAMPP49913 170 aa13.22□□□□□ -0.29
CDC42-204ENST00000411827 RAB4BP61018 213 aa13.22□□□□□ -0.29
CDC42-204ENST00000411827 SSTP61278 116 aa13.22□□□□□ -0.29
CDC42-204ENST00000411827 C14orf178Q8N769 122 aaPredicted RBP13.22□□□□□ -0.29
CDC42-204ENST00000411827 KIF25-AS1Q9Y6Z4 181 aa13.22□□□□□ -0.29
CDC42-204ENST00000411827 TRAV10A0A0B4J240 114 aa13.21□□□□□ -0.29
CDC42-204ENST00000411827 TRGV4A0A0C4DH28 118 aa13.21□□□□□ -0.29
CDC42-204ENST00000411827 H7C1H1 209 aa13.21□□□□□ -0.29
CDC42-204ENST00000411827 UFSP1Q6NVU6 142 aa13.21□□□□□ -0.29
CDC42-204ENST00000411827 TMEM88Q6PEY1 159 aa13.21□□□□□ -0.29
CDC42-204ENST00000411827 POM121L12Q8N7R1 296 aa13.21□□□□□ -0.29
CDC42-204ENST00000411827 FAM210BQ96KR6 192 aa13.21□□□□□ -0.29
CDC42-204ENST00000411827 GNB1LQ9BYB4 327 aa13.21□□□□□ -0.29
CDC42-204ENST00000411827 HLA-DQA1P01909 254 aa13.2□□□□□ -0.3
CDC42-204ENST00000411827 FAM74A4Q5TZK3 123 aa13.2□□□□□ -0.3
CDC42-204ENST00000411827 CBLN2Q8IUK8 224 aa13.2□□□□□ -0.3
CDC42-204ENST00000411827 ZNF479Q96JC4 524 aa13.2□□□□□ -0.3
CDC42-204ENST00000411827 PRO0255Q9UI72 69 aa13.2□□□□□ -0.3
CDC42-204ENST00000411827 TRBV6-4A0A1B0GX49 114 aa13.19□□□□□ -0.3
CDC42-204ENST00000411827 PPP1R17O96001 155 aa13.19□□□□□ -0.3
CDC42-204ENST00000411827 IGHV3-53P01767 116 aa13.19□□□□□ -0.3
CDC42-204ENST00000411827 NANOS2P60321 138 aaKnown RBP13.19□□□□□ -0.3
CDC42-204ENST00000411827 FAM104BQ5XKR9 115 aa13.19□□□□□ -0.3
CDC42-204ENST00000411827 MRAP2Q96G30 205 aa13.19□□□□□ -0.3
CDC42-204ENST00000411827 YPEL4Q96NS1 127 aa13.19□□□□□ -0.3
CDC42-204ENST00000411827 JPT2Q9H910 190 aa13.19□□□□□ -0.3
CDC42-204ENST00000411827 STAB2Q8WWQ8 2551 aa13.19□□□□□ -0.3
CDC42-204ENST00000411827 KMT2CQ8NEZ4 4911 aaKnown RBP13.18□□□□□ -0.3
CDC42-204ENST00000411827 A0A087WWL8 130 aa13.18□□□□□ -0.3
CDC42-204ENST00000411827 TRBV10-1A0A0K0K1A3 114 aa13.18□□□□□ -0.3
CDC42-204ENST00000411827 F5H697 171 aa13.18□□□□□ -0.3
CDC42-204ENST00000411827 H3BNG1 76 aa13.18□□□□□ -0.3
CDC42-204ENST00000411827 PPBPP02775 128 aa13.18□□□□□ -0.3
CDC42-204ENST00000411827 FHL2Q14192 279 aa13.18□□□□□ -0.3
CDC42-204ENST00000411827 Q6ZTC4 211 aa13.18□□□□□ -0.3
CDC42-204ENST00000411827 SAMD10Q9BYL1 202 aa13.18□□□□□ -0.3
CDC42-204ENST00000411827 HHLA3Q9XRX5 114 aa13.18□□□□□ -0.3
CDC42-204ENST00000411827 GATA1P15976 413 aaPredicted RBP13.17□□□□□ -0.3
CDC42-204ENST00000411827 LINC00315P59091 139 aa13.17□□□□□ -0.3
CDC42-204ENST00000411827 ZNF56Q15929 161 aa13.17□□□□□ -0.3
CDC42-204ENST00000411827 COL7A1Q02388 2944 aa13.16□□□□□ -0.3
CDC42-204ENST00000411827 DEFB131BA0A096LNP1 70 aa13.16□□□□□ -0.3
CDC42-204ENST00000411827 TGIF2-C20orf24A0A0A6YYL0 155 aa13.16□□□□□ -0.3
CDC42-204ENST00000411827 F5H768 121 aa13.16□□□□□ -0.3
CDC42-204ENST00000411827 RHOHQ15669 191 aa13.16□□□□□ -0.3
CDC42-204ENST00000411827 PRADC1Q9BSG0 188 aa13.16□□□□□ -0.3
CDC42-204ENST00000411827 MGPP08493 103 aa13.15□□□□□ -0.3
CDC42-204ENST00000411827 RAB4AP20338 218 aa13.15□□□□□ -0.3
CDC42-204ENST00000411827 TMEM136Q6ZRR5 245 aa13.15□□□□□ -0.3
CDC42-204ENST00000411827 WWC2-AS2Q96NR7 200 aa13.15□□□□□ -0.3
CDC42-204ENST00000411827 HTN3P15516 51 aa13.14□□□□□ -0.31
CDC42-204ENST00000411827 SH2D6Q7Z4S9 175 aa13.14□□□□□ -0.31
CDC42-204ENST00000411827 AMN1Q8IY45 258 aa13.14□□□□□ -0.31
CDC42-204ENST00000411827 PHLDA1Q8WV24 401 aaPredicted RBP13.14□□□□□ -0.31
CDC42-204ENST00000411827 DNAJC30Q96LL9 226 aa13.14□□□□□ -0.31
CDC42-204ENST00000411827 NUPR2A6NF83 97 aa13.13□□□□□ -0.31
CDC42-204ENST00000411827 K7EQD1 137 aa13.13□□□□□ -0.31
CDC42-204ENST00000411827 PAX4O43316 350 aa13.13□□□□□ -0.31
CDC42-204ENST00000411827 APCSP02743 223 aa13.13□□□□□ -0.31
CDC42-204ENST00000411827 HOXA5P20719 270 aa13.13□□□□□ -0.31
CDC42-204ENST00000411827 CRYBA4P53673 196 aa13.13□□□□□ -0.31
CDC42-204ENST00000411827 SLC25A29Q8N8R3 303 aa13.13□□□□□ -0.31
CDC42-204ENST00000411827 LAMTOR2Q9Y2Q5 125 aa13.13□□□□□ -0.31
CDC42-204ENST00000411827 IGHV3-73A0A0B4J1V6 119 aa13.12□□□□□ -0.31
CDC42-204ENST00000411827 COLCA2A8K830 154 aa13.12□□□□□ -0.31
CDC42-204ENST00000411827 M0QY20 66 aa13.12□□□□□ -0.31
CDC42-204ENST00000411827 PHOX2AO14813 284 aa13.12□□□□□ -0.31
CDC42-204ENST00000411827 TCTAP57738 103 aa13.12□□□□□ -0.31
CDC42-204ENST00000411827 RNF185Q96GF1 192 aa13.12□□□□□ -0.31
CDC42-204ENST00000411827 KLK5Q9Y337 293 aaPredicted RBP13.12□□□□□ -0.31
CDC42-204ENST00000411827 SCO1O75880 301 aa13.11□□□□□ -0.31
CDC42-204ENST00000411827 CKS2P33552 79 aa13.11□□□□□ -0.31
CDC42-204ENST00000411827 MRPL51Q4U2R6 128 aaKnown RBP13.11□□□□□ -0.31
CDC42-204ENST00000411827 SUMO4Q6EEV6 95 aa13.11□□□□□ -0.31
CDC42-204ENST00000411827 ORMDL3Q8N138 153 aa13.11□□□□□ -0.31
CDC42-204ENST00000411827 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.11□□□□□ -0.31
CDC42-204ENST00000411827 C15orf53Q8NAA6 179 aa13.11□□□□□ -0.31
CDC42-204ENST00000411827 NIT2Q9NQR4 276 aa13.11□□□□□ -0.31
CDC42-204ENST00000411827 TRAPPC1Q9Y5R8 145 aa13.11□□□□□ -0.31
CDC42-204ENST00000411827 HUWE1Q7Z6Z7 4374 aaKnown RBP13.11□□□□□ -0.31
CDC42-204ENST00000411827 RYR3Q15413 4870 aa13.1□□□□□ -0.31
CDC42-204ENST00000411827 TRAV26-1A0A087WT03 109 aa13.1□□□□□ -0.31
CDC42-204ENST00000411827 RAB5AP20339 215 aa13.1□□□□□ -0.31
CDC42-204ENST00000411827 RPL36AP83881 106 aaKnown RBP13.1□□□□□ -0.31
CDC42-204ENST00000411827 CEMP1Q6PRD7 247 aaPredicted RBP13.1□□□□□ -0.31
CDC42-204ENST00000411827 RPL36ALQ969Q0 106 aaKnown RBP13.1□□□□□ -0.31
CDC42-204ENST00000411827 MRPL23Q16540 153 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms