RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 FAT1Q14517 4588 aa14.89□□□□□ -0.03
MSH6-202ENST00000411819 A0A087WWL8 130 aa14.89□□□□□ -0.03
MSH6-202ENST00000411819 TM2D2Q9BX73 214 aa14.89□□□□□ -0.03
MSH6-202ENST00000411819 A0A087WWC5 75 aa14.88□□□□□ -0.03
MSH6-202ENST00000411819 A0A1B0GV50 99 aa14.88□□□□□ -0.03
MSH6-202ENST00000411819 PAGE4O60829 102 aa14.88□□□□□ -0.03
MSH6-202ENST00000411819 LTAP01374 205 aa14.88□□□□□ -0.03
MSH6-202ENST00000411819 ZNF674Q2M3X9 581 aa14.88□□□□□ -0.03
MSH6-202ENST00000411819 LINC01559Q495D7 138 aa14.88□□□□□ -0.03
MSH6-202ENST00000411819 TRBV6-1A0A0K0K1D8 114 aa14.87□□□□□ -0.03
MSH6-202ENST00000411819 SMR3BP02814 79 aaPredicted RBP14.87□□□□□ -0.03
MSH6-202ENST00000411819 DAZ4Q86SG3 579 aaKnown RBP14.87□□□□□ -0.03
MSH6-202ENST00000411819 FAM213BQ8TBF2 198 aa14.87□□□□□ -0.03
MSH6-202ENST00000411819 DAZ3Q9NR90 486 aaKnown RBP14.87□□□□□ -0.03
MSH6-202ENST00000411819 INAFM2P0DMQ5 153 aa14.86□□□□□ -0.03
MSH6-202ENST00000411819 ZNF345Q14585 488 aa14.86□□□□□ -0.03
MSH6-202ENST00000411819 ZFP82Q8N141 532 aa14.86□□□□□ -0.03
MSH6-202ENST00000411819 KCNRGQ8N5I3 272 aa14.86□□□□□ -0.03
MSH6-202ENST00000411819 SFT2D1Q8WV19 159 aa14.86□□□□□ -0.03
MSH6-202ENST00000411819 SFRP2Q96HF1 295 aa14.86□□□□□ -0.03
MSH6-202ENST00000411819 TRAV8-3A0A0A6YYJ7 113 aa14.85□□□□□ -0.03
MSH6-202ENST00000411819 TOR2AQ5JU69 321 aa14.85□□□□□ -0.03
MSH6-202ENST00000411819 ZNF471Q9BX82 626 aaPredicted RBP14.85□□□□□ -0.03
MSH6-202ENST00000411819 URGCP-MRPS24S4R325 110 aa14.85□□□□□ -0.03
MSH6-202ENST00000411819 PFDN1O60925 122 aa14.84□□□□□ -0.03
MSH6-202ENST00000411819 SEC11BP0C7V7 166 aa14.84□□□□□ -0.03
MSH6-202ENST00000411819 WFDC2Q14508 124 aa14.84□□□□□ -0.03
MSH6-202ENST00000411819 TMEM70Q9BUB7 260 aa14.84□□□□□ -0.03
MSH6-202ENST00000411819 SCO2A0A1W2PP80 73 aa14.83□□□□□ -0.04
MSH6-202ENST00000411819 LECT2O14960 151 aa14.83□□□□□ -0.04
MSH6-202ENST00000411819 KANTRA0A1W2PQU2 76 aa14.82□□□□□ -0.04
MSH6-202ENST00000411819 UMAD1C9J7I0 102 aa14.82□□□□□ -0.04
MSH6-202ENST00000411819 RPL36AP83881 106 aaKnown RBP14.81□□□□□ -0.04
MSH6-202ENST00000411819 RPL19P84098 196 aaKnown RBP14.81□□□□□ -0.04
MSH6-202ENST00000411819 MBD3L1Q8WWY6 194 aa14.81□□□□□ -0.04
MSH6-202ENST00000411819 RPL36ALQ969Q0 106 aaKnown RBP14.81□□□□□ -0.04
MSH6-202ENST00000411819 BCL2L11O43521 198 aa14.8□□□□□ -0.04
MSH6-202ENST00000411819 S100A9P06702 114 aaKnown RBP14.8□□□□□ -0.04
MSH6-202ENST00000411819 NIT1Q86X76 327 aa14.8□□□□□ -0.04
MSH6-202ENST00000411819 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.79□□□□□ -0.04
MSH6-202ENST00000411819 A0A0D9SG52 128 aa14.79□□□□□ -0.04
MSH6-202ENST00000411819 TRBV10-1A0A0K0K1A3 114 aa14.79□□□□□ -0.04
MSH6-202ENST00000411819 FAM229AH3BQW9 127 aa14.79□□□□□ -0.04
MSH6-202ENST00000411819 ZNF56Q15929 161 aa14.79□□□□□ -0.04
MSH6-202ENST00000411819 PRR27Q6MZM9 219 aa14.79□□□□□ -0.04
MSH6-202ENST00000411819 BAGE2Q86Y30 109 aa14.79□□□□□ -0.04
MSH6-202ENST00000411819 RMI2Q96E14 147 aa14.79□□□□□ -0.04
MSH6-202ENST00000411819 A0A087WX48 190 aa14.78□□□□□ -0.04
MSH6-202ENST00000411819 HMSDA8MTL9 139 aa14.78□□□□□ -0.04
MSH6-202ENST00000411819 H2AFB1P0C5Y9 115 aa14.78□□□□□ -0.04
MSH6-202ENST00000411819 KCNIP4Q6PIL6 250 aa14.78□□□□□ -0.04
MSH6-202ENST00000411819 OR10AG1Q8NH19 301 aa14.78□□□□□ -0.04
MSH6-202ENST00000411819 KLK12Q9UKR0 248 aa14.78□□□□□ -0.04
MSH6-202ENST00000411819 COX11Q9Y6N1 276 aa14.78□□□□□ -0.04
MSH6-202ENST00000411819 IGKV2D-24A0A075B6R9 120 aa14.77□□□□□ -0.05
MSH6-202ENST00000411819 BAALCQ8WXS3 180 aa14.77□□□□□ -0.05
MSH6-202ENST00000411819 FAM30AQ9NZY2 134 aa14.77□□□□□ -0.05
MSH6-202ENST00000411819 TRBV7-3A0A075B6L6 115 aa14.76□□□□□ -0.05
MSH6-202ENST00000411819 UBE2D3P61077 147 aa14.76□□□□□ -0.05
MSH6-202ENST00000411819 UBE2D2P62837 147 aa14.76□□□□□ -0.05
MSH6-202ENST00000411819 EIF5AP63241 154 aaKnown RBP14.76□□□□□ -0.05
MSH6-202ENST00000411819 UBE2WQ96B02 151 aa14.76□□□□□ -0.05
MSH6-202ENST00000411819 DNAJC30Q96LL9 226 aa14.76□□□□□ -0.05
MSH6-202ENST00000411819 VPS13BQ7Z7G8 4022 aa14.76□□□□□ -0.05
MSH6-202ENST00000411819 DNAH8Q96JB1 4490 aa14.76□□□□□ -0.05
MSH6-202ENST00000411819 MUC21A0A0G2JKD1 596 aa14.75□□□□□ -0.05
MSH6-202ENST00000411819 MUC21A0A140T8X8 626 aa14.75□□□□□ -0.05
MSH6-202ENST00000411819 CXCL1P09341 107 aa14.75□□□□□ -0.05
MSH6-202ENST00000411819 SPANXN1Q5VSR9 72 aa14.75□□□□□ -0.05
MSH6-202ENST00000411819 MLST8Q9BVC4 326 aa14.75□□□□□ -0.05
MSH6-202ENST00000411819 RAB4BP61018 213 aa14.74□□□□□ -0.05
MSH6-202ENST00000411819 ELOBQ15370 118 aa14.74□□□□□ -0.05
MSH6-202ENST00000411819 CHCHD7Q9BUK0 85 aa14.74□□□□□ -0.05
MSH6-202ENST00000411819 C1QBP02746 253 aa14.73□□□□□ -0.05
MSH6-202ENST00000411819 SSTP61278 116 aa14.73□□□□□ -0.05
MSH6-202ENST00000411819 TMUB2Q71RG4 321 aa14.73□□□□□ -0.05
MSH6-202ENST00000411819 TMEM262E9PQX1 116 aa14.72□□□□□ -0.05
MSH6-202ENST00000411819 SNAI2O43623 268 aa14.72□□□□□ -0.05
MSH6-202ENST00000411819 RPL35P42766 123 aaKnown RBP14.72□□□□□ -0.05
MSH6-202ENST00000411819 NEXN-AS1Q8NBZ9 246 aa14.72□□□□□ -0.05
MSH6-202ENST00000411819 OR10G8Q8NGN5 311 aa14.72□□□□□ -0.05
MSH6-202ENST00000411819 GNG13Q9P2W3 67 aa14.72□□□□□ -0.05
MSH6-202ENST00000411819 HERC1Q15751 4861 aa14.71□□□□□ -0.05
MSH6-202ENST00000411819 F5H697 171 aa14.71□□□□□ -0.05
MSH6-202ENST00000411819 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.71□□□□□ -0.05
MSH6-202ENST00000411819 MANBALQ9NQG1 85 aa14.71□□□□□ -0.05
MSH6-202ENST00000411819 DMBT1Q9UGM3 2413 aaPredicted RBP14.71□□□□□ -0.06
MSH6-202ENST00000411819 TRBV6-8A0A0A6YYG3 113 aa14.7□□□□□ -0.06
MSH6-202ENST00000411819 OR5AL1P0C617 328 aa14.7□□□□□ -0.06
MSH6-202ENST00000411819 DERL1Q9BUN8 251 aa14.7□□□□□ -0.06
MSH6-202ENST00000411819 FLG2Q5D862 2391 aaPredicted RBP14.69□□□□□ -0.06
MSH6-202ENST00000411819 RBFOX3A6NFN3 312 aa14.69□□□□□ -0.06
MSH6-202ENST00000411819 CRPP02741 224 aa14.69□□□□□ -0.06
MSH6-202ENST00000411819 LINC01620Q4KN68 170 aa14.69□□□□□ -0.06
MSH6-202ENST00000411819 Q8N976 141 aa14.69□□□□□ -0.06
MSH6-202ENST00000411819 SSBP4Q9BWG4 385 aaPredicted RBP14.69□□□□□ -0.06
MSH6-202ENST00000411819 SMIM17P0DL12 118 aa14.68□□□□□ -0.06
MSH6-202ENST00000411819 CCL20P78556 96 aa14.68□□□□□ -0.06
MSH6-202ENST00000411819 Q0VG73 95 aa14.68□□□□□ -0.06
MSH6-202ENST00000411819 AP1S3Q96PC3 154 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms