RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 MCRIP1C9JLW8 97 aa0.69□□□□□ -2.3
RNU2-28P-201ENST00000410457 PIRTP0C851 137 aa0.69□□□□□ -2.3
RNU2-28P-201ENST00000410457 CYP2G1PQ6ZSU1 146 aa0.69□□□□□ -2.3
RNU2-28P-201ENST00000410457 PSMG3Q9BT73 122 aaPredicted RBP0.69□□□□□ -2.3
RNU2-28P-201ENST00000410457 TMEM191AQ9H0A3 160 aa0.69□□□□□ -2.3
RNU2-28P-201ENST00000410457 TMEM2Q9UHN6 1383 aa0.69□□□□□ -2.3
RNU2-28P-201ENST00000410457 MAP2P11137 1827 aaKnown RBP0.68□□□□□ -2.3
RNU2-28P-201ENST00000410457 F5P12259 2224 aa0.68□□□□□ -2.3
RNU2-28P-201ENST00000410457 BDP1A6H8Y1 2624 aa0.68□□□□□ -2.3
RNU2-28P-201ENST00000410457 HMGN1P05114 100 aa0.68□□□□□ -2.3
RNU2-28P-201ENST00000410457 GUCA1AP43080 201 aaPredicted RBP0.68□□□□□ -2.3
RNU2-28P-201ENST00000410457 SDF2Q99470 211 aa0.68□□□□□ -2.3
RNU2-28P-201ENST00000410457 PLAC8Q9NZF1 115 aa0.68□□□□□ -2.3
RNU2-28P-201ENST00000410457 PLXNA1Q9UIW2 1896 aa0.67□□□□□ -2.3
RNU2-28P-201ENST00000410457 TRAV12-3A0A0B4J271 114 aa0.67□□□□□ -2.3
RNU2-28P-201ENST00000410457 RBAKDNA6NC62 111 aa0.67□□□□□ -2.3
RNU2-28P-201ENST00000410457 CCL3L1P16619 93 aa0.67□□□□□ -2.3
RNU2-28P-201ENST00000410457 NPC2P61916 151 aa0.67□□□□□ -2.3
RNU2-28P-201ENST00000410457 SSBP1Q04837 148 aaKnown RBP0.67□□□□□ -2.3
RNU2-28P-201ENST00000410457 CCDC58Q4VC31 144 aa0.67□□□□□ -2.3
RNU2-28P-201ENST00000410457 SLC48A1Q6P1K1 146 aa0.67□□□□□ -2.3
RNU2-28P-201ENST00000410457 TANC1Q9C0D5 1861 aa0.67□□□□□ -2.3
RNU2-28P-201ENST00000410457 USP24Q9UPU5 2620 aa0.66□□□□□ -2.3
RNU2-28P-201ENST00000410457 C9orf116Q5BN46 136 aaPredicted RBP0.66□□□□□ -2.3
RNU2-28P-201ENST00000410457 LAMB1P07942 1786 aa0.65□□□□□ -2.3
RNU2-28P-201ENST00000410457 NDUFA2O43678 99 aa0.65□□□□□ -2.31
RNU2-28P-201ENST00000410457 KCNRGQ8N5I3 272 aa0.65□□□□□ -2.31
RNU2-28P-201ENST00000410457 TMEM242Q9NWH2 141 aa0.65□□□□□ -2.31
RNU2-28P-201ENST00000410457 CCDC167Q9P0B6 97 aa0.65□□□□□ -2.31
RNU2-28P-201ENST00000410457 RBBP6Q7Z6E9 1792 aaKnown RBP0.65□□□□□ -2.31
RNU2-28P-201ENST00000410457 A0A087WTM6 91 aa0.64□□□□□ -2.31
RNU2-28P-201ENST00000410457 IL5P05113 134 aa0.64□□□□□ -2.31
RNU2-28P-201ENST00000410457 PIPP12273 146 aaPredicted RBP0.64□□□□□ -2.31
RNU2-28P-201ENST00000410457 C20orf197Q8N268 126 aa0.64□□□□□ -2.31
RNU2-28P-201ENST00000410457 BICRAQ9NZM4 1560 aa0.64□□□□□ -2.31
RNU2-28P-201ENST00000410457 CACNA1HO95180 2353 aa0.64□□□□□ -2.31
RNU2-28P-201ENST00000410457 KCPQ6ZWJ8 1503 aa0.64□□□□□ -2.31
RNU2-28P-201ENST00000410457 DAPK1P53355 1430 aa0.64□□□□□ -2.31
RNU2-28P-201ENST00000410457 GRIN2AQ12879 1464 aa0.63□□□□□ -2.31
RNU2-28P-201ENST00000410457 CADP27708 2225 aa0.63□□□□□ -2.31
RNU2-28P-201ENST00000410457 SELENOWP63302 87 aa0.63□□□□□ -2.31
RNU2-28P-201ENST00000410457 C4orf33Q8N1A6 199 aa0.63□□□□□ -2.31
RNU2-28P-201ENST00000410457 COX7B2Q8TF08 81 aa0.63□□□□□ -2.31
RNU2-28P-201ENST00000410457 DPH3Q96FX2 82 aa0.63□□□□□ -2.31
RNU2-28P-201ENST00000410457 RPRMQ9NS64 109 aa0.63□□□□□ -2.31
RNU2-28P-201ENST00000410457 MYOM3Q5VTT5 1437 aa0.63□□□□□ -2.31
RNU2-28P-201ENST00000410457 A6NIN4 97 aa0.62□□□□□ -2.31
RNU2-28P-201ENST00000410457 NDUFB6O95139 128 aa0.62□□□□□ -2.31
RNU2-28P-201ENST00000410457 PRH1P02810 166 aa0.62□□□□□ -2.31
RNU2-28P-201ENST00000410457 FAM74A4Q5TZK3 123 aa0.62□□□□□ -2.31
RNU2-28P-201ENST00000410457 RPL7L1Q6DKI1 246 aaKnown RBP0.62□□□□□ -2.31
RNU2-28P-201ENST00000410457 SPTSSAQ969W0 71 aa0.62□□□□□ -2.31
RNU2-28P-201ENST00000410457 MUC22E2RYF6 1773 aaPredicted RBP0.62□□□□□ -2.31
RNU2-28P-201ENST00000410457 PHIPQ8WWQ0 1821 aa0.61□□□□□ -2.31
RNU2-28P-201ENST00000410457 DOCK11Q5JSL3 2073 aa0.61□□□□□ -2.31
RNU2-28P-201ENST00000410457 MEGF8Q7Z7M0 2845 aa0.61□□□□□ -2.31
RNU2-28P-201ENST00000410457 F2Z2F3 143 aa0.61□□□□□ -2.31
RNU2-28P-201ENST00000410457 IFNA17P01571 189 aa0.61□□□□□ -2.31
RNU2-28P-201ENST00000410457 UBE2G1P62253 170 aa0.61□□□□□ -2.31
RNU2-28P-201ENST00000410457 TSC22D3Q99576 134 aa0.61□□□□□ -2.31
RNU2-28P-201ENST00000410457 BPESC1Q9GZL8 116 aa0.61□□□□□ -2.31
RNU2-28P-201ENST00000410457 MYH9P35579 1960 aaKnown RBP0.6□□□□□ -2.31
RNU2-28P-201ENST00000410457 CBLN1P23435 193 aa0.6□□□□□ -2.31
RNU2-28P-201ENST00000410457 C10orf82Q8WW14 230 aa0.6□□□□□ -2.31
RNU2-28P-201ENST00000410457 ARL11Q969Q4 196 aa0.6□□□□□ -2.31
RNU2-28P-201ENST00000410457 FAM107BQ9H098 131 aa0.6□□□□□ -2.31
RNU2-28P-201ENST00000410457 V9GYV3 84 aa0.6□□□□□ -2.31
RNU2-28P-201ENST00000410457 NRXN2Q9P2S2 1712 aa0.6□□□□□ -2.31
RNU2-28P-201ENST00000410457 CDK13Q14004 1512 aaKnown RBP0.59□□□□□ -2.31
RNU2-28P-201ENST00000410457 FRAS1Q86XX4 4008 aa0.59□□□□□ -2.31
RNU2-28P-201ENST00000410457 FAM92AA1XBS5 289 aa0.59□□□□□ -2.31
RNU2-28P-201ENST00000410457 K7EP13 123 aa0.59□□□□□ -2.31
RNU2-28P-201ENST00000410457 SNCGO76070 127 aa0.59□□□□□ -2.31
RNU2-28P-201ENST00000410457 UBE2D1P51668 147 aa0.59□□□□□ -2.31
RNU2-28P-201ENST00000410457 SMR3AQ99954 134 aa0.59□□□□□ -2.31
RNU2-28P-201ENST00000410457 LINC00470Q9BZP3 86 aa0.59□□□□□ -2.31
RNU2-28P-201ENST00000410457 NAV2Q8IVL1 2488 aa0.59□□□□□ -2.32
RNU2-28P-201ENST00000410457 PARP14Q460N5 1801 aa0.59□□□□□ -2.32
RNU2-28P-201ENST00000410457 TRBV7-1A0A0A6YYK4 115 aa0.58□□□□□ -2.32
RNU2-28P-201ENST00000410457 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.58□□□□□ -2.32
RNU2-28P-201ENST00000410457 COPS9Q8WXC6 57 aa0.58□□□□□ -2.32
RNU2-28P-201ENST00000410457 Q96NJ1 140 aa0.58□□□□□ -2.32
RNU2-28P-201ENST00000410457 PRR15LQ9BU68 103 aa0.58□□□□□ -2.32
RNU2-28P-201ENST00000410457 GVQW2A0A096LPI5 108 aaPredicted RBP0.57□□□□□ -2.32
RNU2-28P-201ENST00000410457 KRTAP2-3P0C7H8 128 aa0.57□□□□□ -2.32
RNU2-28P-201ENST00000410457 ZNF818PQ6ZRF7 136 aa0.57□□□□□ -2.32
RNU2-28P-201ENST00000410457 VMO1Q7Z5L0 202 aa0.57□□□□□ -2.32
RNU2-28P-201ENST00000410457 SMIM11BQ8TCY0 68 aa0.57□□□□□ -2.32
RNU2-28P-201ENST00000410457 KRTAP2-4Q9BYR9 128 aa0.57□□□□□ -2.32
RNU2-28P-201ENST00000410457 KRTAP2-1Q9BYU5 128 aa0.57□□□□□ -2.32
RNU2-28P-201ENST00000410457 TNCP24821 2201 aa0.57□□□□□ -2.32
RNU2-28P-201ENST00000410457 TPRP12270 2363 aaKnown RBP0.56□□□□□ -2.32
RNU2-28P-201ENST00000410457 MUC5BQ9HC84 5762 aaPredicted RBP0.56□□□□□ -2.32
RNU2-28P-201ENST00000410457 ZNF518AQ6AHZ1 1483 aa0.56□□□□□ -2.32
RNU2-28P-201ENST00000410457 TNS1Q9HBL0 1735 aaKnown RBP0.56□□□□□ -2.32
RNU2-28P-201ENST00000410457 TTC28Q96AY4 2481 aa0.56□□□□□ -2.32
RNU2-28P-201ENST00000410457 C1orf54Q8WWF1 131 aa0.56□□□□□ -2.32
RNU2-28P-201ENST00000410457 PDCD10Q9BUL8 212 aa0.56□□□□□ -2.32
RNU2-28P-201ENST00000410457 SNRNP25Q9BV90 132 aaKnown RBP0.56□□□□□ -2.32
RNU2-28P-201ENST00000410457 KDM6BO15054 1643 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms