RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 PHLDA3Q9Y5J5 127 aa9.83□□□□□ -0.84
NIF3L1-205ENST00000409588 IGHV3-73A0A0B4J1V6 119 aa9.82□□□□□ -0.84
NIF3L1-205ENST00000409588 TEX46H3BTG2 121 aa9.82□□□□□ -0.84
NIF3L1-205ENST00000409588 UFSP1Q6NVU6 142 aa9.82□□□□□ -0.84
NIF3L1-205ENST00000409588 SFRP2Q96HF1 295 aa9.82□□□□□ -0.84
NIF3L1-205ENST00000409588 SCRT2Q9NQ03 307 aa9.82□□□□□ -0.84
NIF3L1-205ENST00000409588 A0A087WTM6 91 aa9.81□□□□□ -0.84
NIF3L1-205ENST00000409588 CXCL1P09341 107 aa9.81□□□□□ -0.84
NIF3L1-205ENST00000409588 LAGE3Q14657 143 aa9.81□□□□□ -0.84
NIF3L1-205ENST00000409588 ZFP82Q8N141 532 aa9.81□□□□□ -0.84
NIF3L1-205ENST00000409588 TNFRSF18Q9Y5U5 241 aa9.81□□□□□ -0.84
NIF3L1-205ENST00000409588 TRAV1-1A0A0B4J248 108 aa9.8□□□□□ -0.84
NIF3L1-205ENST00000409588 H3BVH4 76 aa9.8□□□□□ -0.84
NIF3L1-205ENST00000409588 M0R036 132 aa9.8□□□□□ -0.84
NIF3L1-205ENST00000409588 TMUB2Q71RG4 321 aa9.8□□□□□ -0.84
NIF3L1-205ENST00000409588 MLST8Q9BVC4 326 aa9.8□□□□□ -0.84
NIF3L1-205ENST00000409588 TM2D2Q9BX73 214 aa9.8□□□□□ -0.84
NIF3L1-205ENST00000409588 MANBALQ9NQG1 85 aa9.8□□□□□ -0.84
NIF3L1-205ENST00000409588 RYR1P21817 5038 aa9.79□□□□□ -0.84
NIF3L1-205ENST00000409588 TRBV10-1A0A0K0K1A3 114 aa9.79□□□□□ -0.84
NIF3L1-205ENST00000409588 PSCAO43653 123 aa9.79□□□□□ -0.84
NIF3L1-205ENST00000409588 TOR2AQ5JU69 321 aa9.79□□□□□ -0.84
NIF3L1-205ENST00000409588 BAGE2Q86Y30 109 aa9.79□□□□□ -0.84
NIF3L1-205ENST00000409588 MAPKAPK5-AS1Q8N8E1 139 aa9.79□□□□□ -0.84
NIF3L1-205ENST00000409588 MRPL18Q9H0U6 180 aaKnown RBP9.79□□□□□ -0.84
NIF3L1-205ENST00000409588 TRAV8-3A0A0A6YYJ7 113 aa9.78□□□□□ -0.84
NIF3L1-205ENST00000409588 GRIFINA4D1Z8 144 aa9.78□□□□□ -0.84
NIF3L1-205ENST00000409588 LINC00694P0DN24 101 aa9.78□□□□□ -0.84
NIF3L1-205ENST00000409588 Q6ZSN1 163 aa9.78□□□□□ -0.84
NIF3L1-205ENST00000409588 Q8N1X5 172 aa9.78□□□□□ -0.84
NIF3L1-205ENST00000409588 COX11Q9Y6N1 276 aa9.78□□□□□ -0.84
NIF3L1-205ENST00000409588 GAGE12JA6NER3 117 aa9.77□□□□□ -0.85
NIF3L1-205ENST00000409588 GAGE1Q13065 139 aa9.77□□□□□ -0.85
NIF3L1-205ENST00000409588 GAGE4Q13068 117 aa9.77□□□□□ -0.85
NIF3L1-205ENST00000409588 GAGE5Q13069 117 aa9.77□□□□□ -0.85
NIF3L1-205ENST00000409588 GAGE13Q4V321 117 aa9.77□□□□□ -0.85
NIF3L1-205ENST00000409588 NTN5Q8WTR8 489 aaPredicted RBP9.77□□□□□ -0.85
NIF3L1-205ENST00000409588 SAMD10Q9BYL1 202 aa9.77□□□□□ -0.85
NIF3L1-205ENST00000409588 LRP1BQ9NZR2 4599 aa9.77□□□□□ -0.85
NIF3L1-205ENST00000409588 M0R381 172 aa9.76□□□□□ -0.85
NIF3L1-205ENST00000409588 SMIM12Q96EX1 92 aa9.76□□□□□ -0.85
NIF3L1-205ENST00000409588 JPT2Q9H910 190 aa9.76□□□□□ -0.85
NIF3L1-205ENST00000409588 TMSB15BA0A087X1C1 80 aa9.75□□□□□ -0.85
NIF3L1-205ENST00000409588 OR5AL1P0C617 328 aa9.75□□□□□ -0.85
NIF3L1-205ENST00000409588 RAB4BP61018 213 aa9.75□□□□□ -0.85
NIF3L1-205ENST00000409588 RPL36AP83881 106 aaKnown RBP9.75□□□□□ -0.85
NIF3L1-205ENST00000409588 FAM74A4Q5TZK3 123 aa9.75□□□□□ -0.85
NIF3L1-205ENST00000409588 TCTE3Q8IZS6 198 aa9.75□□□□□ -0.85
NIF3L1-205ENST00000409588 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.75□□□□□ -0.85
NIF3L1-205ENST00000409588 RPL36ALQ969Q0 106 aaKnown RBP9.75□□□□□ -0.85
NIF3L1-205ENST00000409588 CHCHD7Q9BUK0 85 aa9.75□□□□□ -0.85
NIF3L1-205ENST00000409588 URGCP-MRPS24S4R325 110 aa9.75□□□□□ -0.85
NIF3L1-205ENST00000409588 TRBV7-3A0A075B6L6 115 aa9.74□□□□□ -0.85
NIF3L1-205ENST00000409588 SNAI2O43623 268 aa9.74□□□□□ -0.85
NIF3L1-205ENST00000409588 IGHV3-30P01768 117 aa9.74□□□□□ -0.85
NIF3L1-205ENST00000409588 IGHV3-33P01772 117 aa9.74□□□□□ -0.85
NIF3L1-205ENST00000409588 IGHV3-30-3P0DP02 117 aa9.74□□□□□ -0.85
NIF3L1-205ENST00000409588 IGHV3-30-5P0DP03 117 aa9.74□□□□□ -0.85
NIF3L1-205ENST00000409588 TAGLN2P37802 199 aaKnown RBP9.74□□□□□ -0.85
NIF3L1-205ENST00000409588 ELOBQ15370 118 aa9.74□□□□□ -0.85
NIF3L1-205ENST00000409588 C14orf178Q8N769 122 aaPredicted RBP9.74□□□□□ -0.85
NIF3L1-205ENST00000409588 OR10G8Q8NGN5 311 aa9.74□□□□□ -0.85
NIF3L1-205ENST00000409588 C11orf52Q96A22 123 aa9.74□□□□□ -0.85
NIF3L1-205ENST00000409588 HSPG2P98160 4391 aa9.73□□□□□ -0.85
NIF3L1-205ENST00000409588 A0A087WWL8 130 aa9.73□□□□□ -0.85
NIF3L1-205ENST00000409588 A0A1B0GV50 99 aa9.73□□□□□ -0.85
NIF3L1-205ENST00000409588 LRCOL1A6NCL2 159 aa9.73□□□□□ -0.85
NIF3L1-205ENST00000409588 PDE6DO43924 150 aa9.73□□□□□ -0.85
NIF3L1-205ENST00000409588 GCSHP23434 173 aa9.73□□□□□ -0.85
NIF3L1-205ENST00000409588 RPL35P42766 123 aaKnown RBP9.73□□□□□ -0.85
NIF3L1-205ENST00000409588 SULT1A2P50226 295 aa9.73□□□□□ -0.85
NIF3L1-205ENST00000409588 LCE1DQ5T752 114 aa9.73□□□□□ -0.85
NIF3L1-205ENST00000409588 KCNIP4Q6PIL6 250 aa9.73□□□□□ -0.85
NIF3L1-205ENST00000409588 SLC51BQ86UW2 128 aa9.73□□□□□ -0.85
NIF3L1-205ENST00000409588 RMI2Q96E14 147 aa9.73□□□□□ -0.85
NIF3L1-205ENST00000409588 DAZAP1Q96EP5 407 aaKnown RBP9.73□□□□□ -0.85
NIF3L1-205ENST00000409588 BIN3Q9NQY0 253 aa9.73□□□□□ -0.85
NIF3L1-205ENST00000409588 GNG13Q9P2W3 67 aa9.73□□□□□ -0.85
NIF3L1-205ENST00000409588 IFNA1P01562 189 aa9.72□□□□□ -0.85
NIF3L1-205ENST00000409588 RPS20P60866 119 aaKnown RBP9.72□□□□□ -0.85
NIF3L1-205ENST00000409588 SPANXN1Q5VSR9 72 aa9.72□□□□□ -0.85
NIF3L1-205ENST00000409588 KRTAP4-7Q9BYR0 210 aa9.72□□□□□ -0.85
NIF3L1-205ENST00000409588 DNAH5Q8TE73 4624 aa9.71□□□□□ -0.85
NIF3L1-205ENST00000409588 XKRY2A2RUG3 117 aa9.71□□□□□ -0.86
NIF3L1-205ENST00000409588 C1QBP02746 253 aa9.71□□□□□ -0.86
NIF3L1-205ENST00000409588 PKIAP61925 76 aa9.71□□□□□ -0.86
NIF3L1-205ENST00000409588 CCL20P78556 96 aa9.71□□□□□ -0.86
NIF3L1-205ENST00000409588 MEF2BQ02080 365 aaPredicted RBP9.71□□□□□ -0.86
NIF3L1-205ENST00000409588 TMEM97Q5BJF2 176 aa9.71□□□□□ -0.86
NIF3L1-205ENST00000409588 Q9HAA7 133 aa9.71□□□□□ -0.86
NIF3L1-205ENST00000409588 Q9UF83 564 aa9.71□□□□□ -0.86
NIF3L1-205ENST00000409588 A0A087WX48 190 aa9.7□□□□□ -0.86
NIF3L1-205ENST00000409588 IGLV5-52A0A0A0MRZ9 124 aa9.7□□□□□ -0.86
NIF3L1-205ENST00000409588 SMIM17P0DL12 118 aa9.7□□□□□ -0.86
NIF3L1-205ENST00000409588 UBE2D3P61077 147 aa9.7□□□□□ -0.86
NIF3L1-205ENST00000409588 UBE2D2P62837 147 aa9.7□□□□□ -0.86
NIF3L1-205ENST00000409588 PRR27Q6MZM9 219 aa9.7□□□□□ -0.86
NIF3L1-205ENST00000409588 NIT1Q86X76 327 aa9.7□□□□□ -0.86
NIF3L1-205ENST00000409588 Q8N814 137 aa9.7□□□□□ -0.86
NIF3L1-205ENST00000409588 KRTAP4-5Q9BYR2 181 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms