RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 SMIM15Q7Z3B0 74 aa11.71□□□□□ -0.53
TSPAN4-208ENST00000409531 ATP5L2Q7Z4Y8 100 aa11.71□□□□□ -0.53
TSPAN4-208ENST00000409531 OR4C5Q8NGB2 326 aa11.71□□□□□ -0.53
TSPAN4-208ENST00000409531 BTF3L4Q96K17 158 aa11.71□□□□□ -0.53
TSPAN4-208ENST00000409531 CSMD3Q7Z407 3707 aa11.71□□□□□ -0.54
TSPAN4-208ENST00000409531 RHODO00212 210 aa11.7□□□□□ -0.54
TSPAN4-208ENST00000409531 RS1O15537 224 aa11.7□□□□□ -0.54
TSPAN4-208ENST00000409531 S100A8P05109 93 aa11.7□□□□□ -0.54
TSPAN4-208ENST00000409531 SMIM17P0DL12 118 aa11.7□□□□□ -0.54
TSPAN4-208ENST00000409531 NANOS2P60321 138 aaKnown RBP11.69□□□□□ -0.54
TSPAN4-208ENST00000409531 CFAP126Q5VTH2 177 aa11.69□□□□□ -0.54
TSPAN4-208ENST00000409531 CEMP1Q6PRD7 247 aaPredicted RBP11.69□□□□□ -0.54
TSPAN4-208ENST00000409531 ATRAIDQ6UW56 229 aa11.69□□□□□ -0.54
TSPAN4-208ENST00000409531 MSRB1Q9NZV6 116 aa11.69□□□□□ -0.54
TSPAN4-208ENST00000409531 NUPR2A6NF83 97 aa11.68□□□□□ -0.54
TSPAN4-208ENST00000409531 ZFP2Q6ZN57 461 aa11.68□□□□□ -0.54
TSPAN4-208ENST00000409531 Q6ZTC4 211 aa11.68□□□□□ -0.54
TSPAN4-208ENST00000409531 URGCP-MRPS24S4R325 110 aa11.68□□□□□ -0.54
TSPAN4-208ENST00000409531 HBBP68871 147 aa11.67□□□□□ -0.54
TSPAN4-208ENST00000409531 MRPL54Q6P161 138 aaKnown RBP11.67□□□□□ -0.54
TSPAN4-208ENST00000409531 POM121L12Q8N7R1 296 aa11.67□□□□□ -0.54
TSPAN4-208ENST00000409531 PHLDA1Q8WV24 401 aaPredicted RBP11.67□□□□□ -0.54
TSPAN4-208ENST00000409531 JPT2Q9H910 190 aa11.67□□□□□ -0.54
TSPAN4-208ENST00000409531 SMCO4Q9NRQ5 59 aa11.67□□□□□ -0.54
TSPAN4-208ENST00000409531 SACSQ9NZJ4 4579 aa11.67□□□□□ -0.54
TSPAN4-208ENST00000409531 TRAV10A0A0B4J240 114 aa11.66□□□□□ -0.54
TSPAN4-208ENST00000409531 TRGV4A0A0C4DH28 118 aa11.66□□□□□ -0.54
TSPAN4-208ENST00000409531 IGHV3-53P01767 116 aa11.66□□□□□ -0.54
TSPAN4-208ENST00000409531 FAM74A4Q5TZK3 123 aa11.66□□□□□ -0.54
TSPAN4-208ENST00000409531 RASL11AQ6T310 242 aa11.66□□□□□ -0.54
TSPAN4-208ENST00000409531 C14orf178Q8N769 122 aaPredicted RBP11.66□□□□□ -0.54
TSPAN4-208ENST00000409531 ZNF479Q96JC4 524 aa11.66□□□□□ -0.54
TSPAN4-208ENST00000409531 KRTAP17-1Q9BYP8 105 aa11.66□□□□□ -0.54
TSPAN4-208ENST00000409531 DPH3P1Q9H4G8 78 aa11.66□□□□□ -0.54
TSPAN4-208ENST00000409531 KLK5Q9Y337 293 aaPredicted RBP11.66□□□□□ -0.54
TSPAN4-208ENST00000409531 A0A087WWL8 130 aa11.65□□□□□ -0.54
TSPAN4-208ENST00000409531 LCE6AA0A183 80 aa11.65□□□□□ -0.54
TSPAN4-208ENST00000409531 CRYGDP07320 174 aa11.65□□□□□ -0.54
TSPAN4-208ENST00000409531 HTN3P15516 51 aa11.65□□□□□ -0.54
TSPAN4-208ENST00000409531 EVI2AP22794 236 aa11.65□□□□□ -0.54
TSPAN4-208ENST00000409531 SLAQ13239 276 aa11.65□□□□□ -0.54
TSPAN4-208ENST00000409531 SAMD10Q9BYL1 202 aa11.65□□□□□ -0.54
TSPAN4-208ENST00000409531 TMEM191AQ9H0A3 160 aa11.65□□□□□ -0.54
TSPAN4-208ENST00000409531 DEFB131BA0A096LNP1 70 aa11.64□□□□□ -0.55
TSPAN4-208ENST00000409531 A0A1B0GXF2 115 aa11.64□□□□□ -0.55
TSPAN4-208ENST00000409531 F5H768 121 aa11.64□□□□□ -0.55
TSPAN4-208ENST00000409531 CAMPP49913 170 aa11.64□□□□□ -0.55
TSPAN4-208ENST00000409531 UFSP1Q6NVU6 142 aa11.64□□□□□ -0.55
TSPAN4-208ENST00000409531 ELOBQ15370 118 aa11.63□□□□□ -0.55
TSPAN4-208ENST00000409531 COX19Q49B96 90 aa11.63□□□□□ -0.55
TSPAN4-208ENST00000409531 KIF25-AS1Q9Y6Z4 181 aa11.63□□□□□ -0.55
TSPAN4-208ENST00000409531 STARD9Q9P2P6 4700 aa11.63□□□□□ -0.55
TSPAN4-208ENST00000409531 TRBV24-1A0A075B6N3 115 aa11.62□□□□□ -0.55
TSPAN4-208ENST00000409531 IGHV3-73A0A0B4J1V6 119 aa11.62□□□□□ -0.55
TSPAN4-208ENST00000409531 F5H697 171 aa11.62□□□□□ -0.55
TSPAN4-208ENST00000409531 RAB4BP61018 213 aa11.62□□□□□ -0.55
TSPAN4-208ENST00000409531 FHL2Q14192 279 aa11.62□□□□□ -0.55
TSPAN4-208ENST00000409531 ZNF56Q15929 161 aa11.62□□□□□ -0.55
TSPAN4-208ENST00000409531 TMEM88Q6PEY1 159 aa11.62□□□□□ -0.55
TSPAN4-208ENST00000409531 CBLN2Q8IUK8 224 aa11.62□□□□□ -0.55
TSPAN4-208ENST00000409531 PRO0255Q9UI72 69 aa11.62□□□□□ -0.55
TSPAN4-208ENST00000409531 MGPP08493 103 aa11.61□□□□□ -0.55
TSPAN4-208ENST00000409531 GATA1P15976 413 aaPredicted RBP11.61□□□□□ -0.55
TSPAN4-208ENST00000409531 HOXA5P20719 270 aa11.61□□□□□ -0.55
TSPAN4-208ENST00000409531 GATD1Q8NB37 220 aa11.61□□□□□ -0.55
TSPAN4-208ENST00000409531 FRZBQ92765 325 aa11.61□□□□□ -0.55
TSPAN4-208ENST00000409531 HHLA3Q9XRX5 114 aa11.61□□□□□ -0.55
TSPAN4-208ENST00000409531 TRBV6-4A0A1B0GX49 114 aa11.6□□□□□ -0.55
TSPAN4-208ENST00000409531 FAM210BQ96KR6 192 aa11.6□□□□□ -0.55
TSPAN4-208ENST00000409531 H7C1H1 209 aa11.6□□□□□ -0.55
TSPAN4-208ENST00000409531 LINC00315P59091 139 aa11.6□□□□□ -0.55
TSPAN4-208ENST00000409531 RHOHQ15669 191 aa11.6□□□□□ -0.55
TSPAN4-208ENST00000409531 PRADC1Q9BSG0 188 aa11.6□□□□□ -0.55
TSPAN4-208ENST00000409531 TGIF2-C20orf24A0A0A6YYL0 155 aa11.59□□□□□ -0.55
TSPAN4-208ENST00000409531 K7EQD1 137 aa11.59□□□□□ -0.55
TSPAN4-208ENST00000409531 PAX4O43316 350 aa11.59□□□□□ -0.55
TSPAN4-208ENST00000409531 CRYBA4P53673 196 aa11.59□□□□□ -0.55
TSPAN4-208ENST00000409531 FAM104BQ5XKR9 115 aa11.59□□□□□ -0.55
TSPAN4-208ENST00000409531 AMN1Q8IY45 258 aa11.59□□□□□ -0.55
TSPAN4-208ENST00000409531 TRAV26-1A0A087WT03 109 aa11.58□□□□□ -0.56
TSPAN4-208ENST00000409531 H3BNG1 76 aa11.58□□□□□ -0.56
TSPAN4-208ENST00000409531 HLA-DQA1P01909 254 aa11.58□□□□□ -0.56
TSPAN4-208ENST00000409531 MT-ND6P03923 174 aa11.58□□□□□ -0.56
TSPAN4-208ENST00000409531 RAB4AP20338 218 aa11.58□□□□□ -0.56
TSPAN4-208ENST00000409531 SLC25A29Q8N8R3 303 aa11.58□□□□□ -0.56
TSPAN4-208ENST00000409531 MRAP2Q96G30 205 aa11.58□□□□□ -0.56
TSPAN4-208ENST00000409531 YPEL4Q96NS1 127 aa11.58□□□□□ -0.56
TSPAN4-208ENST00000409531 GNB1LQ9BYB4 327 aa11.58□□□□□ -0.56
TSPAN4-208ENST00000409531 DNAH1Q9P2D7 4330 aa11.57□□□□□ -0.56
TSPAN4-208ENST00000409531 TRBV10-1A0A0K0K1A3 114 aa11.57□□□□□ -0.56
TSPAN4-208ENST00000409531 TCTAP57738 103 aa11.57□□□□□ -0.56
TSPAN4-208ENST00000409531 SUMO4Q6EEV6 95 aa11.57□□□□□ -0.56
TSPAN4-208ENST00000409531 TMEM136Q6ZRR5 245 aa11.57□□□□□ -0.56
TSPAN4-208ENST00000409531 A0A0J9YY99 117 aa11.56□□□□□ -0.56
TSPAN4-208ENST00000409531 IGLL5B9A064 214 aa11.56□□□□□ -0.56
TSPAN4-208ENST00000409531 SCO1O75880 301 aa11.56□□□□□ -0.56
TSPAN4-208ENST00000409531 Q6ZSN1 163 aa11.56□□□□□ -0.56
TSPAN4-208ENST00000409531 RNF185Q96GF1 192 aa11.56□□□□□ -0.56
TSPAN4-208ENST00000409531 M0QY20 66 aa11.55□□□□□ -0.56
TSPAN4-208ENST00000409531 C15orf53Q8NAA6 179 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms