RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 KIF26BQ2KJY2 2108 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 LRCOL1A6NCL2 159 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 C10orf142B7Z368 130 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 K7EQG2 157 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 SOCS3O14543 225 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 IGLV2-14P01704 120 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 C3orf79P0CE67 100 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 C9orf153Q5TBE3 101 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 GAGE2AQ6NT46 116 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 Q6ZTI0 123 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 MUC6Q6W4X9 2439 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 HEATR1Q9H583 2144 aaKnown RBP3.79□□□□□ -1.8
SCN3A-203ENST00000409101 ALPK3Q96L96 1907 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 C18orf32Q8TCD1 76 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 MDFICQ9P1T7 246 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 CNOT1A5YKK6 2376 aaKnown RBP3.79□□□□□ -1.8
SCN3A-203ENST00000409101 ZFHX2Q9C0A1 2572 aaPredicted RBP3.79□□□□□ -1.8
SCN3A-203ENST00000409101 DNAJC13O75165 2243 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 J3QQQ9 107 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 NCR3O14931 201 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 ZFP2Q6ZN57 461 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 POLR3KQ9Y2Y1 108 aaPredicted RBP3.79□□□□□ -1.8
SCN3A-203ENST00000409101 TRBV10-1A0A0K0K1A3 114 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 HIGD2BQ4VC39 106 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 MORN5Q5VZ52 161 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 CCL25O15444 150 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 NUP210LQ5VU65 1888 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 DENND4AQ7Z401 1863 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 CRYGBP07316 175 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 IGHV4-30-4P0DP06 118 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 UBE2D1P51668 147 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 REG3AQ06141 175 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 ZNF124Q15973 351 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 TRBV6-1A0A0K0K1D8 114 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 K7EN84 100 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 NANOS2P60321 138 aaKnown RBP3.78□□□□□ -1.8
SCN3A-203ENST00000409101 LGALS9BQ3B8N2 356 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 HIST1H2BLQ99880 126 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 LRRK1Q38SD2 2015 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 UTF1Q5T230 341 aa3.78□□□□□ -1.81
SCN3A-203ENST00000409101 MRPL35Q9NZE8 188 aaKnown RBP3.78□□□□□ -1.81
SCN3A-203ENST00000409101 PHF3Q92576 2039 aaKnown RBP3.78□□□□□ -1.81
SCN3A-203ENST00000409101 PTPRSQ13332 1948 aa3.77□□□□□ -1.81
SCN3A-203ENST00000409101 TPRP12270 2363 aaKnown RBP3.77□□□□□ -1.81
SCN3A-203ENST00000409101 F8VRH5 84 aa3.77□□□□□ -1.81
SCN3A-203ENST00000409101 AVPP01185 164 aa3.77□□□□□ -1.81
SCN3A-203ENST00000409101 IGLC2P0DOY2 106 aa3.77□□□□□ -1.81
SCN3A-203ENST00000409101 HIST3H2BBQ8N257 126 aa3.77□□□□□ -1.81
SCN3A-203ENST00000409101 TP53TG3Q9ULZ0 132 aa3.77□□□□□ -1.81
SCN3A-203ENST00000409101 NDUFS6O75380 124 aaKnown RBP3.77□□□□□ -1.81
SCN3A-203ENST00000409101 GATA1P15976 413 aaPredicted RBP3.77□□□□□ -1.81
SCN3A-203ENST00000409101 LINC00269Q8N2A0 174 aa3.77□□□□□ -1.81
SCN3A-203ENST00000409101 PRSS47A8MTI9 375 aa3.77□□□□□ -1.81
SCN3A-203ENST00000409101 NHLRC4P0CG21 123 aaPredicted RBP3.77□□□□□ -1.81
SCN3A-203ENST00000409101 CEP192Q8TEP8 1941 aa3.77□□□□□ -1.81
SCN3A-203ENST00000409101 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.77□□□□□ -1.81
SCN3A-203ENST00000409101 IGLV1-40P01703 118 aa3.77□□□□□ -1.81
SCN3A-203ENST00000409101 TP53BP1Q12888 1972 aaPredicted RBP3.77□□□□□ -1.81
SCN3A-203ENST00000409101 BVES-AS1Q5T3Y7 98 aa3.77□□□□□ -1.81
SCN3A-203ENST00000409101 Q8N6K4 173 aa3.77□□□□□ -1.81
SCN3A-203ENST00000409101 MED12Q93074 2177 aa3.76□□□□□ -1.81
SCN3A-203ENST00000409101 ZNF106Q9H2Y7 1883 aaKnown RBP3.76□□□□□ -1.81
SCN3A-203ENST00000409101 A0A087WZ39 114 aa3.76□□□□□ -1.81
SCN3A-203ENST00000409101 hADV29S1A0JD25 119 aa3.76□□□□□ -1.81
SCN3A-203ENST00000409101 COLCA2A8K830 154 aa3.76□□□□□ -1.81
SCN3A-203ENST00000409101 LGALS9CQ6DKI2 356 aa3.76□□□□□ -1.81
SCN3A-203ENST00000409101 C20orf173Q96LM9 149 aa3.76□□□□□ -1.81
SCN3A-203ENST00000409101 H7C423 109 aa3.76□□□□□ -1.81
SCN3A-203ENST00000409101 KPRPQ5T749 579 aaPredicted RBP3.76□□□□□ -1.81
SCN3A-203ENST00000409101 RIF1Q5UIP0 2472 aaKnown RBP3.76□□□□□ -1.81
SCN3A-203ENST00000409101 USF3Q68DE3 2245 aa3.76□□□□□ -1.81
SCN3A-203ENST00000409101 FAM167A-AS1Q96KT0 104 aa3.76□□□□□ -1.81
SCN3A-203ENST00000409101 CARD19Q96LW7 228 aa3.76□□□□□ -1.81
SCN3A-203ENST00000409101 SPTBN2O15020 2390 aa3.76□□□□□ -1.81
SCN3A-203ENST00000409101 DIDO1Q9BTC0 2240 aaKnown RBP3.76□□□□□ -1.81
SCN3A-203ENST00000409101 ZNF407Q9C0G0 2248 aa3.76□□□□□ -1.81
SCN3A-203ENST00000409101 LYPD6BQ8NI32 183 aa3.76□□□□□ -1.81
SCN3A-203ENST00000409101 TNRC6AQ8NDV7 1962 aaKnown RBP3.76□□□□□ -1.81
SCN3A-203ENST00000409101 FRMD6-AS1P0C7T7 363 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 Q6ZS46 218 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 WFDC10AQ9H1F0 79 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 C1orf229Q6ZS94 237 aaPredicted RBP3.75□□□□□ -1.81
SCN3A-203ENST00000409101 CHCHD10Q8WYQ3 142 aaPredicted RBP3.75□□□□□ -1.81
SCN3A-203ENST00000409101 DOCK9Q9BZ29 2069 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 A0A1B0GV90 55 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 NDUFB1O75438 58 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 FUSP35637 526 aaKnown RBP eCLIP3.75□□□□□ -1.81
SCN3A-203ENST00000409101 MSRB1Q9NZV6 116 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 C9JAW5 83 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 KIR3DS1Q14943 382 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 MAJINQ3KP22 176 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 RETNQ9HD89 108 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 ORMDL1Q9P0S3 153 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 PCNX2A6NKB5 2137 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 IGKV1D-37A0A075B6S9 117 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 C9JQL5 133 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 MTURNQ8N3F0 131 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 ZFAND2AQ8N6M9 145 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 ABCA4P78363 2273 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 H3BQ85 93 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms