RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 INS-IGF2F8WCM5 200 aa6.33□□□□□ -1.4
SNX13-201ENST00000409076 K7ENP7 123 aa6.33□□□□□ -1.4
SNX13-201ENST00000409076 TRPT1Q86TN4 253 aaKnown RBP6.33□□□□□ -1.4
SNX13-201ENST00000409076 OR5A1Q8NGJ0 315 aa6.33□□□□□ -1.4
SNX13-201ENST00000409076 UBE2E2Q96LR5 201 aa6.33□□□□□ -1.4
SNX13-201ENST00000409076 CFAP46Q8IYW2 2715 aa6.33□□□□□ -1.4
SNX13-201ENST00000409076 MYMXA0A1B0GTQ4 84 aa6.33□□□□□ -1.4
SNX13-201ENST00000409076 PRSS47A8MTI9 375 aa6.33□□□□□ -1.4
SNX13-201ENST00000409076 C9JAW5 83 aa6.33□□□□□ -1.4
SNX13-201ENST00000409076 OR11H6Q8NGC7 330 aa6.33□□□□□ -1.4
SNX13-201ENST00000409076 FAM110DQ8TAY7 271 aaPredicted RBP6.33□□□□□ -1.4
SNX13-201ENST00000409076 DPH3P1Q9H4G8 78 aa6.33□□□□□ -1.4
SNX13-201ENST00000409076 HHLA3Q9XRX5 114 aa6.33□□□□□ -1.4
SNX13-201ENST00000409076 A0A087WX48 190 aa6.33□□□□□ -1.4
SNX13-201ENST00000409076 F8VRH5 84 aa6.33□□□□□ -1.4
SNX13-201ENST00000409076 NDUFS8O00217 210 aa6.33□□□□□ -1.4
SNX13-201ENST00000409076 CFHR3Q02985 330 aa6.33□□□□□ -1.4
SNX13-201ENST00000409076 ITLN2Q8WWU7 325 aaPredicted RBP6.33□□□□□ -1.4
SNX13-201ENST00000409076 CLPSL1A2RUU4 121 aa6.32□□□□□ -1.4
SNX13-201ENST00000409076 RBAKDNA6NC62 111 aa6.32□□□□□ -1.4
SNX13-201ENST00000409076 HERVK_113P61574 105 aa6.32□□□□□ -1.4
SNX13-201ENST00000409076 KLRB1Q12918 225 aa6.32□□□□□ -1.4
SNX13-201ENST00000409076 Q6ZSV7 163 aa6.32□□□□□ -1.4
SNX13-201ENST00000409076 RASL10AQ92737 203 aa6.32□□□□□ -1.4
SNX13-201ENST00000409076 C11orf68Q9H3H3 251 aaKnown RBP6.32□□□□□ -1.4
SNX13-201ENST00000409076 CKS1BP61024 79 aa6.32□□□□□ -1.4
SNX13-201ENST00000409076 DGAT2L7PQ6IED9 249 aa6.32□□□□□ -1.4
SNX13-201ENST00000409076 ZNF493Q6ZR52 646 aa6.32□□□□□ -1.4
SNX13-201ENST00000409076 ZFAND3Q9H8U3 227 aa6.32□□□□□ -1.4
SNX13-201ENST00000409076 GCN1Q92616 2671 aaKnown RBP6.32□□□□□ -1.4
SNX13-201ENST00000409076 TRAV8-3A0A0A6YYJ7 113 aa6.32□□□□□ -1.4
SNX13-201ENST00000409076 LGALS1P09382 135 aaKnown RBP6.32□□□□□ -1.4
SNX13-201ENST00000409076 BAALCQ8WXS3 180 aa6.32□□□□□ -1.4
SNX13-201ENST00000409076 AJUBAQ96IF1 538 aa6.32□□□□□ -1.4
SNX13-201ENST00000409076 CCL19Q99731 98 aa6.32□□□□□ -1.4
SNX13-201ENST00000409076 TRBV20-1A0A075B6N2 111 aa6.31□□□□□ -1.4
SNX13-201ENST00000409076 A0A0J9YXV3 536 aa6.31□□□□□ -1.4
SNX13-201ENST00000409076 SPINK8P0C7L1 97 aa6.31□□□□□ -1.4
SNX13-201ENST00000409076 UFSP1Q6NVU6 142 aa6.31□□□□□ -1.4
SNX13-201ENST00000409076 NPBQ8NG41 125 aa6.31□□□□□ -1.4
SNX13-201ENST00000409076 FASNP49327 2511 aaKnown RBP6.31□□□□□ -1.4
SNX13-201ENST00000409076 NIPBLQ6KC79 2804 aaeCLIP6.31□□□□□ -1.4
SNX13-201ENST00000409076 IGHV7-4-1A0A0J9YVY3 117 aa6.31□□□□□ -1.4
SNX13-201ENST00000409076 M0R1W7 72 aa6.31□□□□□ -1.4
SNX13-201ENST00000409076 IGHV4-59P01825 116 aa6.31□□□□□ -1.4
SNX13-201ENST00000409076 RAB9AP51151 201 aa6.31□□□□□ -1.4
SNX13-201ENST00000409076 IGF2-ASQ6U949 168 aa6.31□□□□□ -1.4
SNX13-201ENST00000409076 PRB1P04280 392 aa6.31□□□□□ -1.4
SNX13-201ENST00000409076 MOB4Q9Y3A3 225 aa6.31□□□□□ -1.4
SNX13-201ENST00000409076 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.3□□□□□ -1.4
SNX13-201ENST00000409076 IGKV2-29A2NJV5 120 aaPredicted RBP6.3□□□□□ -1.4
SNX13-201ENST00000409076 CD28P10747 220 aa6.3□□□□□ -1.4
SNX13-201ENST00000409076 ORMDL2Q53FV1 153 aa6.3□□□□□ -1.4
SNX13-201ENST00000409076 SUMO4Q6EEV6 95 aa6.3□□□□□ -1.4
SNX13-201ENST00000409076 RRN3P1Q2M238 152 aa6.3□□□□□ -1.4
SNX13-201ENST00000409076 NRACQ8N912 160 aa6.3□□□□□ -1.4
SNX13-201ENST00000409076 RNF5Q99942 180 aa6.3□□□□□ -1.4
SNX13-201ENST00000409076 TOMM7Q9P0U1 55 aa6.3□□□□□ -1.4
SNX13-201ENST00000409076 IGHV4-30-2A0A087WSY4 118 aa6.3□□□□□ -1.4
SNX13-201ENST00000409076 MT-ATP8P03928 68 aa6.3□□□□□ -1.4
SNX13-201ENST00000409076 UBE2E1P51965 193 aa6.3□□□□□ -1.4
SNX13-201ENST00000409076 LINC01559Q495D7 138 aa6.3□□□□□ -1.4
SNX13-201ENST00000409076 C16orf54Q6UWD8 224 aa6.3□□□□□ -1.4
SNX13-201ENST00000409076 FOXI2Q6ZQN5 318 aa6.3□□□□□ -1.4
SNX13-201ENST00000409076 C8orf31Q8N9H6 132 aa6.3□□□□□ -1.4
SNX13-201ENST00000409076 PLNP26678 52 aa6.29□□□□□ -1.4
SNX13-201ENST00000409076 APRG1Q8IVJ8 170 aa6.29□□□□□ -1.4
SNX13-201ENST00000409076 C5orf56Q8N8D9 126 aa6.29□□□□□ -1.4
SNX13-201ENST00000409076 VCX2Q9H322 139 aa6.29□□□□□ -1.4
SNX13-201ENST00000409076 ODF3BA8MYP8 253 aa6.29□□□□□ -1.4
SNX13-201ENST00000409076 MRAP2Q96G30 205 aa6.29□□□□□ -1.4
SNX13-201ENST00000409076 Q9UF83 564 aa6.29□□□□□ -1.4
SNX13-201ENST00000409076 FLNAP21333 2647 aaKnown RBP6.28□□□□□ -1.4
SNX13-201ENST00000409076 DEFB131AP59861 70 aa6.28□□□□□ -1.4
SNX13-201ENST00000409076 C9orf139Q6ZV77 190 aa6.28□□□□□ -1.4
SNX13-201ENST00000409076 SIRPDQ9H106 197 aa6.28□□□□□ -1.4
SNX13-201ENST00000409076 TMEM238LA0A1B0GVL6 79 aa6.28□□□□□ -1.4
SNX13-201ENST00000409076 A6NJY4 79 aa6.28□□□□□ -1.4
SNX13-201ENST00000409076 MINOS1Q5TGZ0 78 aa6.28□□□□□ -1.4
SNX13-201ENST00000409076 C18orf65Q6ZTR6 163 aa6.28□□□□□ -1.4
SNX13-201ENST00000409076 LY6G5BQ8NDX9 201 aa6.28□□□□□ -1.4
SNX13-201ENST00000409076 DLX4Q92988 240 aaPredicted RBP6.28□□□□□ -1.4
SNX13-201ENST00000409076 XCL2Q9UBD3 114 aa6.28□□□□□ -1.4
SNX13-201ENST00000409076 TRAV26-1A0A087WT03 109 aa6.28□□□□□ -1.4
SNX13-201ENST00000409076 TRAV13-1A0A0B4J241 112 aa6.28□□□□□ -1.4
SNX13-201ENST00000409076 A4D1N5 150 aa6.28□□□□□ -1.4
SNX13-201ENST00000409076 HECTD1Q9ULT8 2610 aa6.27□□□□□ -1.41
SNX13-201ENST00000409076 TRBV7-1A0A0A6YYK4 115 aa6.27□□□□□ -1.41
SNX13-201ENST00000409076 RNASE1P07998 156 aaKnown RBP6.27□□□□□ -1.41
SNX13-201ENST00000409076 TSPEAR-AS2P59090 65 aa6.27□□□□□ -1.41
SNX13-201ENST00000409076 Q8N1Y9 231 aa6.27□□□□□ -1.41
SNX13-201ENST00000409076 MINOS1-NBL1R4GNA1 71 aa6.27□□□□□ -1.41
SNX13-201ENST00000409076 U3KQK5 164 aa6.27□□□□□ -1.41
SNX13-201ENST00000409076 TSPAN13O95857 204 aa6.27□□□□□ -1.41
SNX13-201ENST00000409076 ID1P41134 155 aa6.27□□□□□ -1.41
SNX13-201ENST00000409076 CRIP2P52943 208 aaPredicted RBP6.27□□□□□ -1.41
SNX13-201ENST00000409076 ZFAND2AQ8N6M9 145 aa6.27□□□□□ -1.41
SNX13-201ENST00000409076 LINC01587Q99440 93 aa6.27□□□□□ -1.41
SNX13-201ENST00000409076 PIMREGQ9BSJ6 248 aa6.27□□□□□ -1.41
SNX13-201ENST00000409076 SPANXB1Q9NS25 103 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms