RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 XGP55808 180 aa13.63□□□□□ -0.23
SMPD4-202ENST00000409031 ZNF80P51504 273 aaPredicted RBP13.63□□□□□ -0.23
SMPD4-202ENST00000409031 NEXN-AS1Q8NBZ9 246 aa13.63□□□□□ -0.23
SMPD4-202ENST00000409031 HTN3P15516 51 aa13.63□□□□□ -0.23
SMPD4-202ENST00000409031 LINC00574Q9H8X3 128 aa13.63□□□□□ -0.23
SMPD4-202ENST00000409031 CRYGBP07316 175 aa13.62□□□□□ -0.23
SMPD4-202ENST00000409031 BPESC1Q9GZL8 116 aa13.62□□□□□ -0.23
SMPD4-202ENST00000409031 A0A0J9YY99 117 aa13.62□□□□□ -0.23
SMPD4-202ENST00000409031 A0A1W2PRX2 142 aa13.62□□□□□ -0.23
SMPD4-202ENST00000409031 WT1P19544 449 aaPredicted RBP13.62□□□□□ -0.23
SMPD4-202ENST00000409031 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.62□□□□□ -0.23
SMPD4-202ENST00000409031 IGKV2-29A2NJV5 120 aaPredicted RBP13.62□□□□□ -0.23
SMPD4-202ENST00000409031 IGLV1-47P01700 117 aa13.62□□□□□ -0.23
SMPD4-202ENST00000409031 LINC01619G3V211 115 aa13.61□□□□□ -0.23
SMPD4-202ENST00000409031 H3BUA1 57 aa13.61□□□□□ -0.23
SMPD4-202ENST00000409031 NACAE9PAV3 2078 aa13.61□□□□□ -0.23
SMPD4-202ENST00000409031 IGHV7-81A0A0B4J1V7 117 aa13.61□□□□□ -0.23
SMPD4-202ENST00000409031 NDUFC2O95298 119 aa13.61□□□□□ -0.23
SMPD4-202ENST00000409031 C16orf54Q6UWD8 224 aa13.61□□□□□ -0.23
SMPD4-202ENST00000409031 IGHV1-58A0A0C4DH39 117 aa13.61□□□□□ -0.23
SMPD4-202ENST00000409031 NXPH4O95158 308 aa13.61□□□□□ -0.23
SMPD4-202ENST00000409031 P0DMU3 169 aa13.61□□□□□ -0.23
SMPD4-202ENST00000409031 FAM231AP0DMU4 169 aa13.61□□□□□ -0.23
SMPD4-202ENST00000409031 FAM231CP0DMU5 169 aa13.61□□□□□ -0.23
SMPD4-202ENST00000409031 IGFL3Q6UXB1 125 aa13.61□□□□□ -0.23
SMPD4-202ENST00000409031 hADV29S1A0JD25 119 aa13.6□□□□□ -0.23
SMPD4-202ENST00000409031 B4DSR2 109 aa13.6□□□□□ -0.23
SMPD4-202ENST00000409031 SP5Q6BEB4 398 aaPredicted RBP13.6□□□□□ -0.23
SMPD4-202ENST00000409031 SND1-IT1Q9HBX3 110 aa13.6□□□□□ -0.23
SMPD4-202ENST00000409031 TTC28Q96AY4 2481 aa13.6□□□□□ -0.23
SMPD4-202ENST00000409031 EP400Q96L91 3159 aa13.6□□□□□ -0.23
SMPD4-202ENST00000409031 IGHV3-30-3P0DP02 117 aa13.59□□□□□ -0.23
SMPD4-202ENST00000409031 INSL3P51460 131 aa13.59□□□□□ -0.23
SMPD4-202ENST00000409031 C3orf22Q8N5N4 141 aa13.59□□□□□ -0.23
SMPD4-202ENST00000409031 XCL2Q9UBD3 114 aa13.59□□□□□ -0.23
SMPD4-202ENST00000409031 URB1-AS1Q96HZ7 61 aa13.59□□□□□ -0.23
SMPD4-202ENST00000409031 C20orf203Q8NBC4 194 aa13.59□□□□□ -0.23
SMPD4-202ENST00000409031 PSMB8P28062 276 aa13.58□□□□□ -0.23
SMPD4-202ENST00000409031 CRIP1P50238 77 aa13.58□□□□□ -0.23
SMPD4-202ENST00000409031 HOXD3P31249 432 aaPredicted RBP13.58□□□□□ -0.24
SMPD4-202ENST00000409031 NCKAP5O14513 1909 aa13.58□□□□□ -0.24
SMPD4-202ENST00000409031 KIAA1549LQ6ZVL6 1849 aa13.58□□□□□ -0.24
SMPD4-202ENST00000409031 IMUPQ9GZP8 106 aa13.58□□□□□ -0.24
SMPD4-202ENST00000409031 MIAQ16674 131 aa13.57□□□□□ -0.24
SMPD4-202ENST00000409031 IGHV3-33P01772 117 aa13.57□□□□□ -0.24
SMPD4-202ENST00000409031 IGHG2P01859 326 aa13.57□□□□□ -0.24
SMPD4-202ENST00000409031 SVIPQ8NHG7 77 aa13.57□□□□□ -0.24
SMPD4-202ENST00000409031 JMJD7-PLA2G4BH0Y9G9 81 aa13.57□□□□□ -0.24
SMPD4-202ENST00000409031 RUSC1-AS1Q66K80 236 aa13.57□□□□□ -0.24
SMPD4-202ENST00000409031 A0A0J9YXY3 114 aa13.56□□□□□ -0.24
SMPD4-202ENST00000409031 DAND5Q8N907 189 aa13.56□□□□□ -0.24
SMPD4-202ENST00000409031 TRBV30A0A0K0K1B3 111 aa13.56□□□□□ -0.24
SMPD4-202ENST00000409031 C1orf229Q6ZS94 237 aaPredicted RBP13.56□□□□□ -0.24
SMPD4-202ENST00000409031 RNF185Q96GF1 192 aa13.56□□□□□ -0.24
SMPD4-202ENST00000409031 FANCD2OSQ96PS1 177 aa13.56□□□□□ -0.24
SMPD4-202ENST00000409031 DSCR9P59020 149 aa13.55□□□□□ -0.24
SMPD4-202ENST00000409031 IGLV2-11P01706 119 aa13.55□□□□□ -0.24
SMPD4-202ENST00000409031 TMEM131Q92545 1883 aa13.54□□□□□ -0.24
SMPD4-202ENST00000409031 CITED2Q99967 270 aaPredicted RBP13.54□□□□□ -0.24
SMPD4-202ENST00000409031 TRBV7-3A0A075B6L6 115 aa13.54□□□□□ -0.24
SMPD4-202ENST00000409031 Q6Q795 121 aa13.54□□□□□ -0.24
SMPD4-202ENST00000409031 TRAV4A0A0B4J268 109 aa13.54□□□□□ -0.24
SMPD4-202ENST00000409031 VSIG2Q96IQ7 327 aa13.54□□□□□ -0.24
SMPD4-202ENST00000409031 MDFICQ9P1T7 246 aa13.54□□□□□ -0.24
SMPD4-202ENST00000409031 CCDC179H3BU77 68 aa13.53□□□□□ -0.24
SMPD4-202ENST00000409031 COX7A2LO14548 114 aa13.53□□□□□ -0.24
SMPD4-202ENST00000409031 DAZAP2Q15038 168 aaPredicted RBP13.53□□□□□ -0.24
SMPD4-202ENST00000409031 DKK4Q9UBT3 224 aa13.53□□□□□ -0.24
SMPD4-202ENST00000409031 CENPVL3A0A0U1RRI6 287 aa13.52□□□□□ -0.24
SMPD4-202ENST00000409031 NDUFA7O95182 113 aa13.52□□□□□ -0.24
SMPD4-202ENST00000409031 F8WEM9 126 aa13.52□□□□□ -0.25
SMPD4-202ENST00000409031 MSMPQ1L6U9 139 aa13.52□□□□□ -0.25
SMPD4-202ENST00000409031 MRPS12O15235 138 aaKnown RBP13.51□□□□□ -0.25
SMPD4-202ENST00000409031 RPL35AP18077 110 aaKnown RBP13.51□□□□□ -0.25
SMPD4-202ENST00000409031 Q8N9W7 124 aa13.51□□□□□ -0.25
SMPD4-202ENST00000409031 LECT2O14960 151 aa13.51□□□□□ -0.25
SMPD4-202ENST00000409031 TRIAP1O43715 76 aa13.5□□□□□ -0.25
SMPD4-202ENST00000409031 DEFB130BP0DP73 79 aa13.5□□□□□ -0.25
SMPD4-202ENST00000409031 DEFB130AP0DP74 79 aa13.5□□□□□ -0.25
SMPD4-202ENST00000409031 HOXB4P17483 251 aaPredicted RBP13.5□□□□□ -0.25
SMPD4-202ENST00000409031 OPRPNQ99935 248 aaPredicted RBP13.5□□□□□ -0.25
SMPD4-202ENST00000409031 PRR30Q53SZ7 412 aaPredicted RBP13.5□□□□□ -0.25
SMPD4-202ENST00000409031 TMEM61Q8N0U2 210 aa13.49□□□□□ -0.25
SMPD4-202ENST00000409031 C11orf44Q8N8P7 122 aa13.49□□□□□ -0.25
SMPD4-202ENST00000409031 HHLA3Q9XRX5 114 aa13.49□□□□□ -0.25
SMPD4-202ENST00000409031 HCFC1P51610 2035 aa13.49□□□□□ -0.25
SMPD4-202ENST00000409031 NFE4Q86UQ8 179 aa13.49□□□□□ -0.25
SMPD4-202ENST00000409031 U3KQE9 123 aa13.49□□□□□ -0.25
SMPD4-202ENST00000409031 IGHV3-30P01768 117 aa13.49□□□□□ -0.25
SMPD4-202ENST00000409031 IGHV3-30-5P0DP03 117 aa13.49□□□□□ -0.25
SMPD4-202ENST00000409031 DAZ2Q13117 558 aaKnown RBP13.48□□□□□ -0.25
SMPD4-202ENST00000409031 DAZ4Q86SG3 579 aaKnown RBP13.48□□□□□ -0.25
SMPD4-202ENST00000409031 DAZ3Q9NR90 486 aaKnown RBP13.48□□□□□ -0.25
SMPD4-202ENST00000409031 NBL1P41271 181 aa13.48□□□□□ -0.25
SMPD4-202ENST00000409031 PRR14LQ5THK1 2151 aa13.48□□□□□ -0.25
SMPD4-202ENST00000409031 TRAV25A0A0B4J276 109 aa13.47□□□□□ -0.25
SMPD4-202ENST00000409031 GATA3P23771 443 aa13.47□□□□□ -0.25
SMPD4-202ENST00000409031 DPH3Q96FX2 82 aa13.47□□□□□ -0.25
SMPD4-202ENST00000409031 PCDH15Q96QU1 1955 aa13.47□□□□□ -0.25
SMPD4-202ENST00000409031 HIST2H2BCQ6DN03 193 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms