RNA–Protein interactions for RNA: ENST00000405315.8

NUCB1-201, Transcript of nucleobindin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NUCB1, Length 2,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-201ENST00000405315 TRAV12-2A0A075B6T6 113 aa10.91□□□□□ -0.66
NUCB1-201ENST00000405315 SDHAF1A6NFY7 115 aa10.91□□□□□ -0.66
NUCB1-201ENST00000405315 F8W1H4 67 aa10.91□□□□□ -0.66
NUCB1-201ENST00000405315 PMVKQ15126 192 aa10.91□□□□□ -0.66
NUCB1-201ENST00000405315 LINC01549A6NIU2 74 aa10.9□□□□□ -0.66
NUCB1-201ENST00000405315 B4DSR2 109 aa10.9□□□□□ -0.66
NUCB1-201ENST00000405315 IGHV4-59P01825 116 aa10.9□□□□□ -0.66
NUCB1-201ENST00000405315 HERVK_113P61574 105 aa10.9□□□□□ -0.66
NUCB1-201ENST00000405315 KLHL30-AS1Q8NEE0 82 aa10.9□□□□□ -0.66
NUCB1-201ENST00000405315 IGHV3-16A0A0C4DH30 117 aa10.9□□□□□ -0.67
NUCB1-201ENST00000405315 LGALS9O00182 355 aa10.9□□□□□ -0.67
NUCB1-201ENST00000405315 HOXA3O43365 443 aaPredicted RBP10.9□□□□□ -0.67
NUCB1-201ENST00000405315 PAPPA-AS1Q5QFB9 102 aa10.9□□□□□ -0.67
NUCB1-201ENST00000405315 MORN3Q6PF18 240 aaPredicted RBP10.9□□□□□ -0.67
NUCB1-201ENST00000405315 C9orf85Q96MD7 179 aa10.9□□□□□ -0.67
NUCB1-201ENST00000405315 SRSF9Q13242 221 aaKnown RBP eCLIP10.89□□□□□ -0.67
NUCB1-201ENST00000405315 ZNF56Q15929 161 aa10.89□□□□□ -0.67
NUCB1-201ENST00000405315 SVIPQ8NHG7 77 aa10.89□□□□□ -0.67
NUCB1-201ENST00000405315 TMEM141Q96I45 108 aa10.89□□□□□ -0.67
NUCB1-201ENST00000405315 ODF3Q96PU9 254 aa10.89□□□□□ -0.67
NUCB1-201ENST00000405315 SPANXB1Q9NS25 103 aaPredicted RBP10.89□□□□□ -0.67
NUCB1-201ENST00000405315 MDFICQ9P1T7 246 aa10.89□□□□□ -0.67
NUCB1-201ENST00000405315 ZNF580Q9UK33 172 aa10.89□□□□□ -0.67
NUCB1-201ENST00000405315 A0A0J9YX75 114 aa10.89□□□□□ -0.67
NUCB1-201ENST00000405315 TMEM238LA0A1B0GVL6 79 aa10.89□□□□□ -0.67
NUCB1-201ENST00000405315 A6NJY4 79 aa10.89□□□□□ -0.67
NUCB1-201ENST00000405315 SNRPD3P62318 126 aaKnown RBP10.89□□□□□ -0.67
NUCB1-201ENST00000405315 MTURNQ8N3F0 131 aa10.89□□□□□ -0.67
NUCB1-201ENST00000405315 TIMM17AQ99595 171 aa10.89□□□□□ -0.67
NUCB1-201ENST00000405315 PGPEP1Q9NXJ5 209 aa10.89□□□□□ -0.67
NUCB1-201ENST00000405315 ZNF256Q9Y2P7 627 aaPredicted RBP10.89□□□□□ -0.67
NUCB1-201ENST00000405315 DEFB112Q30KQ8 113 aa10.88□□□□□ -0.67
NUCB1-201ENST00000405315 TRBV27A0A0K0K1C4 114 aa10.88□□□□□ -0.67
NUCB1-201ENST00000405315 Q8N1Y9 231 aa10.88□□□□□ -0.67
NUCB1-201ENST00000405315 SYT8Q8NBV8 401 aa10.88□□□□□ -0.67
NUCB1-201ENST00000405315 MRPL16Q9NX20 251 aaKnown RBP10.88□□□□□ -0.67
NUCB1-201ENST00000405315 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.87□□□□□ -0.673e-6■■□□□ 13.5
NUCB1-201ENST00000405315 TRBV6-5A0A0K0K1A5 114 aa10.87□□□□□ -0.67
NUCB1-201ENST00000405315 COL12A1Q99715 3063 aa10.87□□□□□ -0.67
NUCB1-201ENST00000405315 K7EQG2 157 aa10.87□□□□□ -0.67
NUCB1-201ENST00000405315 SPINK13Q1W4C9 94 aa10.87□□□□□ -0.67
NUCB1-201ENST00000405315 GAGE13Q4V321 117 aa10.87□□□□□ -0.67
NUCB1-201ENST00000405315 TMEM170BQ5T4T1 132 aa10.87□□□□□ -0.67
NUCB1-201ENST00000405315 CLUHP3Q96NS8 147 aa10.87□□□□□ -0.67
NUCB1-201ENST00000405315 SH2D6Q7Z4S9 175 aa10.86□□□□□ -0.67
NUCB1-201ENST00000405315 TSPEAR-AS2P59090 65 aa10.86□□□□□ -0.67
NUCB1-201ENST00000405315 ETDBQ3ZM63 59 aa10.86□□□□□ -0.67
NUCB1-201ENST00000405315 NRGNQ92686 78 aa10.86□□□□□ -0.67
NUCB1-201ENST00000405315 SPG11Q96JI7 2443 aa10.86□□□□□ -0.67
NUCB1-201ENST00000405315 IGHV1OR15-1A0A075B7D0 117 aa10.85□□□□□ -0.67
NUCB1-201ENST00000405315 M0QY20 66 aa10.85□□□□□ -0.67
NUCB1-201ENST00000405315 UBE2D1P51668 147 aa10.85□□□□□ -0.67
NUCB1-201ENST00000405315 SYNJ2BPP57105 145 aa10.85□□□□□ -0.67
NUCB1-201ENST00000405315 Q5PR19 223 aa10.85□□□□□ -0.67
NUCB1-201ENST00000405315 PRO0461Q9UI25 63 aa10.85□□□□□ -0.67
NUCB1-201ENST00000405315 A0A0J9YY99 117 aa10.85□□□□□ -0.67
NUCB1-201ENST00000405315 GATA3P23771 443 aa10.85□□□□□ -0.67
NUCB1-201ENST00000405315 ZNF876PQ49A33 203 aa10.85□□□□□ -0.67
NUCB1-201ENST00000405315 ZNRF2Q8NHG8 242 aa10.85□□□□□ -0.67
NUCB1-201ENST00000405315 CSPG4Q6UVK1 2322 aa10.85□□□□□ -0.67
NUCB1-201ENST00000405315 TMEM89A2RUT3 159 aa10.83□□□□□ -0.68
NUCB1-201ENST00000405315 APOMO95445 188 aa10.83□□□□□ -0.68
NUCB1-201ENST00000405315 TSPAN13O95857 204 aa10.83□□□□□ -0.68
NUCB1-201ENST00000405315 NSUN5P1Q3KNT7 163 aa10.83□□□□□ -0.68
NUCB1-201ENST00000405315 TRPT1Q86TN4 253 aaKnown RBP10.83□□□□□ -0.68
NUCB1-201ENST00000405315 CELSR2Q9HCU4 2923 aa10.83□□□□□ -0.68
NUCB1-201ENST00000405315 J3QR89 54 aa10.83□□□□□ -0.68
NUCB1-201ENST00000405315 RHOHQ15669 191 aa10.83□□□□□ -0.68
NUCB1-201ENST00000405315 DUX5Q96PT3 197 aa10.83□□□□□ -0.68
NUCB1-201ENST00000405315 OPRPNQ99935 248 aaPredicted RBP10.83□□□□□ -0.68
NUCB1-201ENST00000405315 MAP1AP78559 2803 aaPredicted RBP10.83□□□□□ -0.68
NUCB1-201ENST00000405315 SFTA2Q6UW10 78 aa10.82□□□□□ -0.68
NUCB1-201ENST00000405315 TSSC4Q9Y5U2 329 aaPredicted RBP10.82□□□□□ -0.68
NUCB1-201ENST00000405315 LOC107984156A0A0G2JMH3 177 aa10.81□□□□□ -0.68
NUCB1-201ENST00000405315 ARL17AQ8IVW1 177 aa10.81□□□□□ -0.68
NUCB1-201ENST00000405315 LINC01356Q8N9X3 169 aa10.81□□□□□ -0.68
NUCB1-201ENST00000405315 DLX4Q92988 240 aaPredicted RBP10.81□□□□□ -0.68
NUCB1-201ENST00000405315 J3QQQ9 107 aa10.81□□□□□ -0.68
NUCB1-201ENST00000405315 LGALS3P17931 250 aaKnown RBP10.81□□□□□ -0.68
NUCB1-201ENST00000405315 DSCR9P59020 149 aa10.81□□□□□ -0.68
NUCB1-201ENST00000405315 SPAG8Q99932 426 aaPredicted RBP10.81□□□□□ -0.68
NUCB1-201ENST00000405315 PKD1L2Q7Z442 2459 aa10.81□□□□□ -0.68
NUCB1-201ENST00000405315 CRYBG3Q68DQ2 2970 aa10.81□□□□□ -0.68
NUCB1-201ENST00000405315 IGHV3-30P01768 117 aa10.8□□□□□ -0.68
NUCB1-201ENST00000405315 P0DMU3 169 aa10.8□□□□□ -0.68
NUCB1-201ENST00000405315 FAM231AP0DMU4 169 aa10.8□□□□□ -0.68
NUCB1-201ENST00000405315 FAM231CP0DMU5 169 aa10.8□□□□□ -0.68
NUCB1-201ENST00000405315 IGHV3-30-5P0DP03 117 aa10.8□□□□□ -0.68
NUCB1-201ENST00000405315 HOXD3P31249 432 aaPredicted RBP10.8□□□□□ -0.68
NUCB1-201ENST00000405315 NFE4Q86UQ8 179 aa10.8□□□□□ -0.68
NUCB1-201ENST00000405315 NDUFA11Q86Y39 141 aa10.8□□□□□ -0.68
NUCB1-201ENST00000405315 AMELXQ99217 191 aa10.8□□□□□ -0.68
NUCB1-201ENST00000405315 TRGV11A0A075B6L2 103 aa10.8□□□□□ -0.68
NUCB1-201ENST00000405315 PSMB2P49721 201 aa10.8□□□□□ -0.68
NUCB1-201ENST00000405315 SLC25A29Q8N8R3 303 aa10.8□□□□□ -0.68
NUCB1-201ENST00000405315 I3L3M4 83 aa10.79□□□□□ -0.68
NUCB1-201ENST00000405315 C20orf203Q8NBC4 194 aa10.79□□□□□ -0.68
NUCB1-201ENST00000405315 MAPK1IP1LQ8NDC0 245 aa10.79□□□□□ -0.68
NUCB1-201ENST00000405315 GTSF1LQ9H1H1 148 aa10.79□□□□□ -0.68
NUCB1-201ENST00000405315 GAGE12HA6NDE8 117 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms