RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 TNRC6BQ9UPQ9 1833 aaKnown RBP5.66□□□□□ -1.5
HDAC9-202ENST00000405010 RHODO00212 210 aa5.66□□□□□ -1.5
HDAC9-202ENST00000405010 CNFNQ9BYD5 112 aa5.66□□□□□ -1.5
HDAC9-202ENST00000405010 DAZ1Q9NQZ3 744 aaKnown RBP5.66□□□□□ -1.5
HDAC9-202ENST00000405010 KLK9Q9UKQ9 250 aa5.66□□□□□ -1.5
HDAC9-202ENST00000405010 RS1O15537 224 aa5.66□□□□□ -1.5
HDAC9-202ENST00000405010 IGHV3-33P01772 117 aa5.66□□□□□ -1.5
HDAC9-202ENST00000405010 C22orf34Q6ZV56 151 aa5.66□□□□□ -1.5
HDAC9-202ENST00000405010 PIP4P2Q8N4L2 257 aa5.66□□□□□ -1.5
HDAC9-202ENST00000405010 CLEC2BQ92478 149 aa5.66□□□□□ -1.5
HDAC9-202ENST00000405010 LINC01587Q99440 93 aa5.66□□□□□ -1.5
HDAC9-202ENST00000405010 CDIP1Q9H305 208 aa5.66□□□□□ -1.5
HDAC9-202ENST00000405010 TRAV12-2A0A075B6T6 113 aa5.65□□□□□ -1.5
HDAC9-202ENST00000405010 UBE2D1P51668 147 aa5.65□□□□□ -1.5
HDAC9-202ENST00000405010 RPL32P62910 135 aaKnown RBP5.65□□□□□ -1.5
HDAC9-202ENST00000405010 SPINK13Q1W4C9 94 aa5.65□□□□□ -1.5
HDAC9-202ENST00000405010 IGFL2Q6UWQ7 119 aa5.65□□□□□ -1.5
HDAC9-202ENST00000405010 ZFHX2Q9C0A1 2572 aaPredicted RBP5.65□□□□□ -1.51
HDAC9-202ENST00000405010 TRAV13-1A0A0B4J241 112 aa5.65□□□□□ -1.51
HDAC9-202ENST00000405010 ACYP1P07311 99 aa5.65□□□□□ -1.51
HDAC9-202ENST00000405010 OPRPNQ99935 248 aaPredicted RBP5.65□□□□□ -1.51
HDAC9-202ENST00000405010 C11orf21Q9P2W6 132 aa5.65□□□□□ -1.51
HDAC9-202ENST00000405010 USMG5Q96IX5 58 aa5.65□□□□□ -1.51
HDAC9-202ENST00000405010 CHCHD5Q9BSY4 110 aa5.65□□□□□ -1.51
HDAC9-202ENST00000405010 SMAD5-AS1Q9Y6J3 95 aa5.65□□□□□ -1.51
HDAC9-202ENST00000405010 A0A0B4J2C4 111 aa5.64□□□□□ -1.51
HDAC9-202ENST00000405010 NDUFA4O00483 81 aa5.64□□□□□ -1.51
HDAC9-202ENST00000405010 GATA3P23771 443 aa5.64□□□□□ -1.51
HDAC9-202ENST00000405010 BRD3OSQ6XYD6 125 aa5.64□□□□□ -1.51
HDAC9-202ENST00000405010 JPT2Q9H910 190 aa5.64□□□□□ -1.51
HDAC9-202ENST00000405010 TLN1Q9Y490 2541 aaKnown RBP5.64□□□□□ -1.51
HDAC9-202ENST00000405010 RBMY1BA6NDE4 496 aaKnown RBP5.64□□□□□ -1.51
HDAC9-202ENST00000405010 RBMY1EA6NEQ0 496 aaKnown RBP5.64□□□□□ -1.51
HDAC9-202ENST00000405010 MRPS12O15235 138 aaKnown RBP5.64□□□□□ -1.51
HDAC9-202ENST00000405010 RBMY1DP0C7P1 496 aaKnown RBP5.64□□□□□ -1.51
HDAC9-202ENST00000405010 RBMY1A1P0DJD3 496 aaKnown RBP5.64□□□□□ -1.51
HDAC9-202ENST00000405010 RBMY1CP0DJD4 496 aa5.64□□□□□ -1.51
HDAC9-202ENST00000405010 LINC00158P58513 81 aa5.64□□□□□ -1.51
HDAC9-202ENST00000405010 IGHV1OR15-1A0A075B7D0 117 aa5.64□□□□□ -1.51
HDAC9-202ENST00000405010 IGHV3-30P01768 117 aa5.64□□□□□ -1.51
HDAC9-202ENST00000405010 IGHV3-30-5P0DP03 117 aa5.64□□□□□ -1.51
HDAC9-202ENST00000405010 UBE2E1P51965 193 aa5.64□□□□□ -1.51
HDAC9-202ENST00000405010 IGFL3Q6UXB1 125 aa5.64□□□□□ -1.51
HDAC9-202ENST00000405010 Q6ZS46 218 aa5.64□□□□□ -1.51
HDAC9-202ENST00000405010 TECTAO75443 2155 aa5.64□□□□□ -1.51
HDAC9-202ENST00000405010 TRACP01848 142 aa5.63□□□□□ -1.51
HDAC9-202ENST00000405010 BAALC-AS2P0C853 105 aa5.63□□□□□ -1.51
HDAC9-202ENST00000405010 Q8N9W7 124 aa5.63□□□□□ -1.51
HDAC9-202ENST00000405010 IGF1P05019 195 aa5.63□□□□□ -1.51
HDAC9-202ENST00000405010 UBE2D3P61077 147 aa5.63□□□□□ -1.51
HDAC9-202ENST00000405010 UBE2D2P62837 147 aa5.63□□□□□ -1.51
HDAC9-202ENST00000405010 MRPL23Q16540 153 aaKnown RBP5.63□□□□□ -1.51
HDAC9-202ENST00000405010 LAMA3Q16787 3333 aa5.63□□□□□ -1.51
HDAC9-202ENST00000405010 DAND5Q8N907 189 aa5.63□□□□□ -1.51
HDAC9-202ENST00000405010 PRO0461Q9UI25 63 aa5.63□□□□□ -1.51
HDAC9-202ENST00000405010 IGHV7-4-1A0A0J9YVY3 117 aa5.63□□□□□ -1.51
HDAC9-202ENST00000405010 H3BUX3 64 aa5.63□□□□□ -1.51
HDAC9-202ENST00000405010 PAX4O43316 350 aa5.63□□□□□ -1.51
HDAC9-202ENST00000405010 IGHV3-30-3P0DP02 117 aa5.63□□□□□ -1.51
HDAC9-202ENST00000405010 MED14OSP0DP75 135 aa5.63□□□□□ -1.51
HDAC9-202ENST00000405010 ITLN2Q8WWU7 325 aaPredicted RBP5.63□□□□□ -1.51
HDAC9-202ENST00000405010 IGHV3-38A0A0C4DH36 116 aa5.62□□□□□ -1.51
HDAC9-202ENST00000405010 LGALS9O00182 355 aa5.62□□□□□ -1.51
HDAC9-202ENST00000405010 TRIAP1O43715 76 aa5.62□□□□□ -1.51
HDAC9-202ENST00000405010 P0DMU3 169 aa5.62□□□□□ -1.51
HDAC9-202ENST00000405010 FAM231AP0DMU4 169 aa5.62□□□□□ -1.51
HDAC9-202ENST00000405010 FAM231CP0DMU5 169 aa5.62□□□□□ -1.51
HDAC9-202ENST00000405010 PTPRQQ9UMZ3 2332 aa5.62□□□□□ -1.51
HDAC9-202ENST00000405010 J3KT08 172 aa5.62□□□□□ -1.51
HDAC9-202ENST00000405010 A0A0J9YXY3 114 aa5.62□□□□□ -1.51
HDAC9-202ENST00000405010 ZNF415Q09FC8 603 aa5.62□□□□□ -1.51
HDAC9-202ENST00000405010 OVOL2Q9BRP0 275 aa5.62□□□□□ -1.51
HDAC9-202ENST00000405010 Q9H8V8 135 aa5.61□□□□□ -1.51
HDAC9-202ENST00000405010 IGLV2-18A0A075B6J9 118 aa5.61□□□□□ -1.51
HDAC9-202ENST00000405010 SMCPP49901 116 aaPredicted RBP5.61□□□□□ -1.51
HDAC9-202ENST00000405010 PRR30Q53SZ7 412 aaPredicted RBP5.61□□□□□ -1.51
HDAC9-202ENST00000405010 Q6ZQT7 251 aa5.61□□□□□ -1.51
HDAC9-202ENST00000405010 C20orf203Q8NBC4 194 aa5.61□□□□□ -1.51
HDAC9-202ENST00000405010 MSRB2Q9Y3D2 182 aa5.61□□□□□ -1.51
HDAC9-202ENST00000405010 CRIP2P52943 208 aaPredicted RBP5.61□□□□□ -1.51
HDAC9-202ENST00000405010 SYNJ2BPP57105 145 aa5.61□□□□□ -1.51
HDAC9-202ENST00000405010 LINC00643Q86TS7 51 aa5.61□□□□□ -1.51
HDAC9-202ENST00000405010 PIMREGQ9BSJ6 248 aa5.61□□□□□ -1.51
HDAC9-202ENST00000405010 IGHV3-16A0A0C4DH30 117 aa5.6□□□□□ -1.51
HDAC9-202ENST00000405010 IGHV1-69P01742 117 aa5.6□□□□□ -1.51
HDAC9-202ENST00000405010 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.6□□□□□ -1.51
HDAC9-202ENST00000405010 TRBV30A0A0K0K1B3 111 aa5.6□□□□□ -1.51
HDAC9-202ENST00000405010 IGKV2-29A2NJV5 120 aaPredicted RBP5.6□□□□□ -1.51
HDAC9-202ENST00000405010 ATOX1O00244 68 aa5.6□□□□□ -1.51
HDAC9-202ENST00000405010 SOCS3O14543 225 aa5.6□□□□□ -1.51
HDAC9-202ENST00000405010 ZNF22P17026 224 aaPredicted RBP5.6□□□□□ -1.51
HDAC9-202ENST00000405010 RPL36AP83881 106 aaKnown RBP5.6□□□□□ -1.51
HDAC9-202ENST00000405010 S100A7L2Q5SY68 101 aa5.6□□□□□ -1.51
HDAC9-202ENST00000405010 COX8CQ7Z4L0 72 aa5.6□□□□□ -1.51
HDAC9-202ENST00000405010 RPL36ALQ969Q0 106 aaKnown RBP5.6□□□□□ -1.51
HDAC9-202ENST00000405010 BPESC1Q9GZL8 116 aa5.6□□□□□ -1.51
HDAC9-202ENST00000405010 ZFAND3Q9H8U3 227 aa5.6□□□□□ -1.51
HDAC9-202ENST00000405010 OTOGLQ3ZCN5 2332 aa5.6□□□□□ -1.51
HDAC9-202ENST00000405010 MYO9AB2RTY4 2548 aa5.6□□□□□ -1.51
HDAC9-202ENST00000405010 PTPN13Q12923 2485 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms