RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 NF1P21359 2839 aa12.82□□□□□ -0.36
SNRNP70-202ENST00000401730 JMJD1CQ15652 2540 aa12.82□□□□□ -0.36
SNRNP70-202ENST00000401730 NDUFA4O00483 81 aa12.82□□□□□ -0.36
SNRNP70-202ENST00000401730 IGHV4-59P01825 116 aa12.82□□□□□ -0.36
SNRNP70-202ENST00000401730 RNASE3P12724 160 aaKnown RBP12.82□□□□□ -0.36
SNRNP70-202ENST00000401730 PSMG4Q5JS54 123 aa12.82□□□□□ -0.36
SNRNP70-202ENST00000401730 SYT8Q8NBV8 401 aa12.82□□□□□ -0.36
SNRNP70-202ENST00000401730 PTH2Q96A98 100 aa12.82□□□□□ -0.36
SNRNP70-202ENST00000401730 PRM2P04554 102 aa12.81□□□□□ -0.36
SNRNP70-202ENST00000401730 PSMB2P49721 201 aa12.81□□□□□ -0.36
SNRNP70-202ENST00000401730 PGPEP1Q9NXJ5 209 aa12.81□□□□□ -0.36
SNRNP70-202ENST00000401730 SCGB1D4Q6XE38 83 aa12.8□□□□□ -0.36
SNRNP70-202ENST00000401730 FAM159AQ6UWV7 190 aa12.8□□□□□ -0.36
SNRNP70-202ENST00000401730 PRRC2AP48634 2157 aaKnown RBP12.8□□□□□ -0.36
SNRNP70-202ENST00000401730 PRSS29PA6NIE9 313 aa12.79□□□□□ -0.36
SNRNP70-202ENST00000401730 OR11H12B2RN74 326 aa12.79□□□□□ -0.36
SNRNP70-202ENST00000401730 SOCS3O14543 225 aa12.79□□□□□ -0.36
SNRNP70-202ENST00000401730 OVOL1O14753 267 aa12.79□□□□□ -0.36
SNRNP70-202ENST00000401730 OR11H1Q8NG94 326 aa12.79□□□□□ -0.36
SNRNP70-202ENST00000401730 OR11H2Q8NH07 326 aa12.79□□□□□ -0.36
SNRNP70-202ENST00000401730 HIGD1BQ9P298 99 aa12.79□□□□□ -0.36
SNRNP70-202ENST00000401730 OPRPNQ99935 248 aaPredicted RBP12.79□□□□□ -0.36
SNRNP70-202ENST00000401730 IGHV3-73A0A0B4J1V6 119 aa12.79□□□□□ -0.36
SNRNP70-202ENST00000401730 IGHG2P01859 326 aa12.79□□□□□ -0.36
SNRNP70-202ENST00000401730 C10orf105Q8TEF2 133 aa12.79□□□□□ -0.36
SNRNP70-202ENST00000401730 MRPL53Q96EL3 112 aaKnown RBP12.79□□□□□ -0.36
SNRNP70-202ENST00000401730 TM2D2Q9BX73 214 aa12.79□□□□□ -0.36
SNRNP70-202ENST00000401730 GEMIN7Q9H840 131 aaKnown RBP12.79□□□□□ -0.36
SNRNP70-202ENST00000401730 PRSS47A8MTI9 375 aa12.78□□□□□ -0.36
SNRNP70-202ENST00000401730 H7C1H1 209 aa12.78□□□□□ -0.36
SNRNP70-202ENST00000401730 SRSF9Q13242 221 aaKnown RBP eCLIP12.78□□□□□ -0.36
SNRNP70-202ENST00000401730 C19orf54Q5BKX5 351 aa12.78□□□□□ -0.36
SNRNP70-202ENST00000401730 DAZ1Q9NQZ3 744 aaKnown RBP12.78□□□□□ -0.36
SNRNP70-202ENST00000401730 MDFICQ9P1T7 246 aa12.78□□□□□ -0.36
SNRNP70-202ENST00000401730 IGHV3-64A0A075B6Q5 118 aa12.78□□□□□ -0.36
SNRNP70-202ENST00000401730 F8VRH5 84 aa12.78□□□□□ -0.36
SNRNP70-202ENST00000401730 MSMBP08118 114 aa12.77□□□□□ -0.36
SNRNP70-202ENST00000401730 CRYBA4P53673 196 aa12.77□□□□□ -0.36
SNRNP70-202ENST00000401730 SPINK13Q1W4C9 94 aa12.77□□□□□ -0.36
SNRNP70-202ENST00000401730 RRN3P1Q2M238 152 aa12.77□□□□□ -0.36
SNRNP70-202ENST00000401730 BAALCQ8WXS3 180 aa12.77□□□□□ -0.36
SNRNP70-202ENST00000401730 SLC25A16P16260 332 aa12.77□□□□□ -0.37
SNRNP70-202ENST00000401730 MRAP2Q96G30 205 aa12.77□□□□□ -0.37
SNRNP70-202ENST00000401730 TP53TG1Q9Y2A0 90 aa12.77□□□□□ -0.37
SNRNP70-202ENST00000401730 A6NDX4 124 aa12.77□□□□□ -0.37
SNRNP70-202ENST00000401730 SPINK8P0C7L1 97 aa12.77□□□□□ -0.37
SNRNP70-202ENST00000401730 SYNJ2BPP57105 145 aa12.77□□□□□ -0.37
SNRNP70-202ENST00000401730 PRADC1Q9BSG0 188 aa12.77□□□□□ -0.37
SNRNP70-202ENST00000401730 CHD6Q8TD26 2715 aa12.76□□□□□ -0.37
SNRNP70-202ENST00000401730 LINC01549A6NIU2 74 aa12.76□□□□□ -0.37
SNRNP70-202ENST00000401730 HLA-DRB4P13762 266 aa12.76□□□□□ -0.37
SNRNP70-202ENST00000401730 DEFB112Q30KQ8 113 aa12.76□□□□□ -0.37
SNRNP70-202ENST00000401730 PLEKHB2Q96CS7 222 aa12.76□□□□□ -0.37
SNRNP70-202ENST00000401730 HLA-DRB4X5D2U9 266 aa12.76□□□□□ -0.37
SNRNP70-202ENST00000401730 MTORP42345 2549 aa12.76□□□□□ -0.37
SNRNP70-202ENST00000401730 HOXA3O43365 443 aaPredicted RBP12.76□□□□□ -0.37
SNRNP70-202ENST00000401730 SMPXQ9UHP9 88 aa12.76□□□□□ -0.37
SNRNP70-202ENST00000401730 LINC01546A6NGU7 62 aa12.75□□□□□ -0.37
SNRNP70-202ENST00000401730 ZNF815PA8K554 130 aa12.75□□□□□ -0.37
SNRNP70-202ENST00000401730 ORMDL2Q53FV1 153 aa12.75□□□□□ -0.37
SNRNP70-202ENST00000401730 DUX3Q96PT4 197 aa12.75□□□□□ -0.37
SNRNP70-202ENST00000401730 ACANP16112 2415 aa12.75□□□□□ -0.37
SNRNP70-202ENST00000401730 MT-ATP8P03928 68 aa12.75□□□□□ -0.37
SNRNP70-202ENST00000401730 ZFP2Q6ZN57 461 aa12.75□□□□□ -0.37
SNRNP70-202ENST00000401730 ZNF56Q15929 161 aa12.75□□□□□ -0.37
SNRNP70-202ENST00000401730 NIPBLQ6KC79 2804 aaeCLIP12.74□□□□□ -0.373e-6■□□□□ 11.1
SNRNP70-202ENST00000401730 IGHV4-4A0A075B6R2 117 aa12.74□□□□□ -0.37
SNRNP70-202ENST00000401730 RNF223E7ERA6 249 aa12.74□□□□□ -0.37
SNRNP70-202ENST00000401730 PLNP26678 52 aa12.74□□□□□ -0.37
SNRNP70-202ENST00000401730 DEFB136Q30KP8 78 aa12.74□□□□□ -0.37
SNRNP70-202ENST00000401730 TMEM170BQ5T4T1 132 aa12.74□□□□□ -0.37
SNRNP70-202ENST00000401730 SUMO4Q6EEV6 95 aa12.74□□□□□ -0.37
SNRNP70-202ENST00000401730 USMG5Q96IX5 58 aa12.74□□□□□ -0.37
SNRNP70-202ENST00000401730 PRB1P04280 392 aa12.74□□□□□ -0.37
SNRNP70-202ENST00000401730 TOMM6Q96B49 74 aa12.74□□□□□ -0.37
SNRNP70-202ENST00000401730 SCGB1A1P11684 91 aa12.73□□□□□ -0.37
SNRNP70-202ENST00000401730 NEXN-AS1Q8NBZ9 246 aa12.73□□□□□ -0.37
SNRNP70-202ENST00000401730 SPATA25Q9BR10 227 aa12.73□□□□□ -0.37
SNRNP70-202ENST00000401730 MYMXA0A1B0GTQ4 84 aa12.73□□□□□ -0.37
SNRNP70-202ENST00000401730 C11orf86A6NJI1 115 aa12.72□□□□□ -0.37
SNRNP70-202ENST00000401730 SDHAF1A6NFY7 115 aa12.72□□□□□ -0.37
SNRNP70-202ENST00000401730 H7C2G1 150 aa12.72□□□□□ -0.37
SNRNP70-202ENST00000401730 KNCNA6PVL3 124 aa12.71□□□□□ -0.37
SNRNP70-202ENST00000401730 LGALS1P09382 135 aaKnown RBP12.71□□□□□ -0.37
SNRNP70-202ENST00000401730 PRORYQ9H606 182 aa12.71□□□□□ -0.37
SNRNP70-202ENST00000401730 FOXI1Q12951 378 aa12.71□□□□□ -0.37
SNRNP70-202ENST00000401730 NFE4Q86UQ8 179 aa12.71□□□□□ -0.37
SNRNP70-202ENST00000401730 SCGB1C2P0DMR2 95 aa12.71□□□□□ -0.38
SNRNP70-202ENST00000401730 KLK9Q2XQG4 91 aa12.71□□□□□ -0.38
SNRNP70-202ENST00000401730 KHDC1LQ5JSQ8 128 aa12.71□□□□□ -0.38
SNRNP70-202ENST00000401730 BEX4Q9NWD9 120 aaPredicted RBP12.71□□□□□ -0.38
SNRNP70-202ENST00000401730 LENEPQ9Y5L5 61 aa12.71□□□□□ -0.38
SNRNP70-202ENST00000401730 TSHBP01222 138 aa12.7□□□□□ -0.38
SNRNP70-202ENST00000401730 C18orf65Q6ZTR6 163 aa12.7□□□□□ -0.38
SNRNP70-202ENST00000401730 Q8N1Y9 231 aa12.7□□□□□ -0.38
SNRNP70-202ENST00000401730 DCANP1Q8TF63 244 aa12.7□□□□□ -0.38
SNRNP70-202ENST00000401730 PRO0461Q9UI25 63 aa12.7□□□□□ -0.38
SNRNP70-202ENST00000401730 P0DMU3 169 aa12.69□□□□□ -0.38
SNRNP70-202ENST00000401730 FAM231AP0DMU4 169 aa12.69□□□□□ -0.38
SNRNP70-202ENST00000401730 FAM231CP0DMU5 169 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms