RNA–Protein interactions for RNA: ENST00000401468.7

VPS53-203, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-203ENST00000401468 IGHV4-4A0A075B6R2 117 aa6.48□□□□□ -1.37
VPS53-203ENST00000401468 XKRY2A2RUG3 117 aa6.48□□□□□ -1.37
VPS53-203ENST00000401468 F8W036 122 aa6.48□□□□□ -1.37
VPS53-203ENST00000401468 GATCO43716 136 aaKnown RBP6.48□□□□□ -1.37
VPS53-203ENST00000401468 ARMS2P0C7Q2 107 aa6.48□□□□□ -1.37
VPS53-203ENST00000401468 WDR73Q6P4I2 378 aa6.48□□□□□ -1.37
VPS53-203ENST00000401468 Q6ZTI0 123 aa6.48□□□□□ -1.37
VPS53-203ENST00000401468 OR2D3Q8NGH3 330 aa6.48□□□□□ -1.37
VPS53-203ENST00000401468 TSKUQ8WUA8 353 aa6.48□□□□□ -1.37
VPS53-203ENST00000401468 GTSF1Q8WW33 167 aa6.48□□□□□ -1.37
VPS53-203ENST00000401468 TMSB15BA0A087X1C1 80 aa6.47□□□□□ -1.37
VPS53-203ENST00000401468 A0A1W2PPQ1 181 aa6.47□□□□□ -1.37
VPS53-203ENST00000401468 GRIFINA4D1Z8 144 aa6.47□□□□□ -1.37
VPS53-203ENST00000401468 A8MWL6 223 aa6.47□□□□□ -1.37
VPS53-203ENST00000401468 F2Z2F3 143 aa6.47□□□□□ -1.37
VPS53-203ENST00000401468 H3BVH4 76 aa6.47□□□□□ -1.37
VPS53-203ENST00000401468 GZMBP10144 247 aa6.47□□□□□ -1.37
VPS53-203ENST00000401468 UFSP1Q6NVU6 142 aa6.47□□□□□ -1.37
VPS53-203ENST00000401468 SLC7A5P1Q8MH63 180 aa6.47□□□□□ -1.37
VPS53-203ENST00000401468 C15orf54Q8N8G6 183 aa6.47□□□□□ -1.37
VPS53-203ENST00000401468 OR10G8Q8NGN5 311 aa6.47□□□□□ -1.37
VPS53-203ENST00000401468 DNAH6Q9C0G6 4158 aa6.47□□□□□ -1.37
VPS53-203ENST00000401468 SMIM27A0A1W2PRY6 76 aa6.46□□□□□ -1.38
VPS53-203ENST00000401468 PPP1R2P9O14990 202 aa6.46□□□□□ -1.38
VPS53-203ENST00000401468 HTN3P15516 51 aa6.46□□□□□ -1.38
VPS53-203ENST00000401468 S100A4P26447 101 aaKnown RBP6.46□□□□□ -1.38
VPS53-203ENST00000401468 ZNF876PQ49A33 203 aa6.46□□□□□ -1.38
VPS53-203ENST00000401468 POM121L12Q8N7R1 296 aa6.46□□□□□ -1.38
VPS53-203ENST00000401468 FER1L6-AS1Q8NA97 138 aa6.46□□□□□ -1.38
VPS53-203ENST00000401468 ANAPC16Q96DE5 110 aa6.46□□□□□ -1.38
VPS53-203ENST00000401468 APLNQ9ULZ1 77 aa6.46□□□□□ -1.38
VPS53-203ENST00000401468 DNAH10Q8IVF4 4471 aa6.46□□□□□ -1.38
VPS53-203ENST00000401468 A0A087WWC5 75 aa6.45□□□□□ -1.38
VPS53-203ENST00000401468 TRGV1A0A0A0MS02 117 aa6.45□□□□□ -1.38
VPS53-203ENST00000401468 TRAV4A0A0B4J268 109 aa6.45□□□□□ -1.38
VPS53-203ENST00000401468 M0R2N4 97 aa6.45□□□□□ -1.38
VPS53-203ENST00000401468 RS1O15537 224 aa6.45□□□□□ -1.38
VPS53-203ENST00000401468 CIDEAO60543 219 aa6.45□□□□□ -1.38
VPS53-203ENST00000401468 DAD1P61803 113 aa6.45□□□□□ -1.38
VPS53-203ENST00000401468 CACNG7P62955 275 aa6.45□□□□□ -1.38
VPS53-203ENST00000401468 RNF212Q495C1 297 aa6.45□□□□□ -1.38
VPS53-203ENST00000401468 ZFP82Q8N141 532 aa6.45□□□□□ -1.38
VPS53-203ENST00000401468 OR10AG1Q8NH19 301 aa6.45□□□□□ -1.38
VPS53-203ENST00000401468 TMEM242Q9NWH2 141 aa6.45□□□□□ -1.38
VPS53-203ENST00000401468 MRPL16Q9NX20 251 aaKnown RBP6.45□□□□□ -1.38
VPS53-203ENST00000401468 PHLDA3Q9Y5J5 127 aa6.45□□□□□ -1.38
VPS53-203ENST00000401468 GAGE12BA1L429 117 aa6.44□□□□□ -1.38
VPS53-203ENST00000401468 HIGD1CA8MV81 97 aa6.44□□□□□ -1.38
VPS53-203ENST00000401468 A8MWV9 139 aa6.44□□□□□ -1.38
VPS53-203ENST00000401468 GAGE7O76087 117 aa6.44□□□□□ -1.38
VPS53-203ENST00000401468 MT-ND4LP03901 98 aa6.44□□□□□ -1.38
VPS53-203ENST00000401468 GAGE12FP0CL80 117 aa6.44□□□□□ -1.38
VPS53-203ENST00000401468 GAGE12GP0CL81 117 aa6.44□□□□□ -1.38
VPS53-203ENST00000401468 GAGE12IP0CL82 117 aa6.44□□□□□ -1.38
VPS53-203ENST00000401468 RHEBQ15382 184 aa6.44□□□□□ -1.38
VPS53-203ENST00000401468 CFAP126Q5VTH2 177 aa6.44□□□□□ -1.38
VPS53-203ENST00000401468 LGALS9CQ6DKI2 356 aa6.44□□□□□ -1.38
VPS53-203ENST00000401468 LYZL1Q6UWQ5 148 aa6.44□□□□□ -1.38
VPS53-203ENST00000401468 ZFP2Q6ZN57 461 aa6.44□□□□□ -1.38
VPS53-203ENST00000401468 CLRN3Q8NCR9 226 aa6.44□□□□□ -1.38
VPS53-203ENST00000401468 IMMP2LQ96T52 175 aa6.44□□□□□ -1.38
VPS53-203ENST00000401468 CTDSP1Q9GZU7 261 aa6.44□□□□□ -1.38
VPS53-203ENST00000401468 KIF25-AS1Q9Y6Z4 181 aa6.44□□□□□ -1.38
VPS53-203ENST00000401468 UBR4Q5T4S7 5183 aa6.44□□□□□ -1.38
VPS53-203ENST00000401468 DEFB131BA0A096LNP1 70 aa6.43□□□□□ -1.38
VPS53-203ENST00000401468 TRAV10A0A0B4J240 114 aa6.43□□□□□ -1.38
VPS53-203ENST00000401468 ATP5G1P05496 136 aa6.43□□□□□ -1.38
VPS53-203ENST00000401468 CRYGDP07320 174 aa6.43□□□□□ -1.38
VPS53-203ENST00000401468 DEFB130BP0DP73 79 aa6.43□□□□□ -1.38
VPS53-203ENST00000401468 DEFB130AP0DP74 79 aa6.43□□□□□ -1.38
VPS53-203ENST00000401468 LINC00315P59091 139 aa6.43□□□□□ -1.38
VPS53-203ENST00000401468 SVBPQ8N300 66 aa6.43□□□□□ -1.38
VPS53-203ENST00000401468 NUP35Q8NFH5 326 aa6.43□□□□□ -1.38
VPS53-203ENST00000401468 FAM210BQ96KR6 192 aa6.43□□□□□ -1.38
VPS53-203ENST00000401468 NAT8BQ9UHF3 227 aa6.43□□□□□ -1.38
VPS53-203ENST00000401468 HECTD4Q9Y4D8 3996 aa6.42□□□□□ -1.38
VPS53-203ENST00000401468 IGLV2-18A0A075B6J9 118 aa6.42□□□□□ -1.38
VPS53-203ENST00000401468 TRGV2A0A075B6R0 118 aa6.42□□□□□ -1.38
VPS53-203ENST00000401468 H3BNG1 76 aa6.42□□□□□ -1.38
VPS53-203ENST00000401468 M0R381 172 aa6.42□□□□□ -1.38
VPS53-203ENST00000401468 NTF3P20783 257 aa6.42□□□□□ -1.38
VPS53-203ENST00000401468 FHL2Q14192 279 aa6.42□□□□□ -1.38
VPS53-203ENST00000401468 GATD1Q8NB37 220 aa6.42□□□□□ -1.38
VPS53-203ENST00000401468 ZNF479Q96JC4 524 aa6.42□□□□□ -1.38
VPS53-203ENST00000401468 MSRB1Q9NZV6 116 aa6.42□□□□□ -1.38
VPS53-203ENST00000401468 HERC1Q15751 4861 aa6.41□□□□□ -1.38
VPS53-203ENST00000401468 TRAV9-1A0A075B6T8 112 aa6.41□□□□□ -1.38
VPS53-203ENST00000401468 A0A1B0GUT8 65 aa6.41□□□□□ -1.38
VPS53-203ENST00000401468 A0A1B0GXF2 115 aa6.41□□□□□ -1.38
VPS53-203ENST00000401468 C7orf77A4D0Y5 90 aa6.41□□□□□ -1.38
VPS53-203ENST00000401468 RHODO00212 210 aa6.41□□□□□ -1.38
VPS53-203ENST00000401468 SNAPINO95295 136 aa6.41□□□□□ -1.38
VPS53-203ENST00000401468 APOC3P02656 99 aa6.41□□□□□ -1.38
VPS53-203ENST00000401468 GATA1P15976 413 aaPredicted RBP6.41□□□□□ -1.38
VPS53-203ENST00000401468 SPANXN1Q5VSR9 72 aa6.41□□□□□ -1.38
VPS53-203ENST00000401468 OR4C5Q8NGB2 326 aa6.41□□□□□ -1.38
VPS53-203ENST00000401468 SAMD10Q9BYL1 202 aa6.41□□□□□ -1.38
VPS53-203ENST00000401468 JPT2Q9H910 190 aa6.41□□□□□ -1.38
VPS53-203ENST00000401468 A0A1B0GW15 77 aa6.4□□□□□ -1.38
VPS53-203ENST00000401468 TRBV6-4A0A1B0GX49 114 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms