RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 K7EP34 96 aa8.07□□□□□ -1.12
LINC00649-202ENST00000400353 HOXA3O43365 443 aaPredicted RBP8.07□□□□□ -1.12
LINC00649-202ENST00000400353 DUSP14O95147 198 aaKnown RBP8.07□□□□□ -1.12
LINC00649-202ENST00000400353 NXPH4O95158 308 aa8.07□□□□□ -1.12
LINC00649-202ENST00000400353 LAGE3Q14657 143 aa8.07□□□□□ -1.12
LINC00649-202ENST00000400353 TMEM86BQ8N661 226 aa8.07□□□□□ -1.12
LINC00649-202ENST00000400353 AP1S3Q96PC3 154 aa8.07□□□□□ -1.12
LINC00649-202ENST00000400353 C20orf78Q9BR46 151 aa8.07□□□□□ -1.12
LINC00649-202ENST00000400353 C1QTNF4Q9BXJ3 329 aa8.07□□□□□ -1.12
LINC00649-202ENST00000400353 ZFHX3Q15911 3703 aa8.07□□□□□ -1.12
LINC00649-202ENST00000400353 K7EQG2 157 aa8.07□□□□□ -1.12
LINC00649-202ENST00000400353 FAM159AQ6UWV7 190 aa8.07□□□□□ -1.12
LINC00649-202ENST00000400353 Q6ZQT7 251 aa8.07□□□□□ -1.12
LINC00649-202ENST00000400353 ERASQ7Z444 233 aa8.07□□□□□ -1.12
LINC00649-202ENST00000400353 Q96MF0 132 aa8.07□□□□□ -1.12
LINC00649-202ENST00000400353 PDZD2O15018 2839 aa8.07□□□□□ -1.12
LINC00649-202ENST00000400353 SETXQ7Z333 2677 aaKnown RBP8.07□□□□□ -1.12
LINC00649-202ENST00000400353 C7orf71A4D174 169 aa8.06□□□□□ -1.12
LINC00649-202ENST00000400353 F5H768 121 aa8.06□□□□□ -1.12
LINC00649-202ENST00000400353 GAS8-AS1O95177 125 aa8.06□□□□□ -1.12
LINC00649-202ENST00000400353 GATA1P15976 413 aaPredicted RBP8.06□□□□□ -1.12
LINC00649-202ENST00000400353 C10orf99Q6UWK7 81 aa8.06□□□□□ -1.12
LINC00649-202ENST00000400353 C12orf54Q6X4T0 127 aa8.06□□□□□ -1.12
LINC00649-202ENST00000400353 WFDC3Q8IUB2 231 aa8.06□□□□□ -1.12
LINC00649-202ENST00000400353 TMEM158Q8WZ71 300 aa8.06□□□□□ -1.12
LINC00649-202ENST00000400353 ANAPC13Q9BS18 74 aa8.06□□□□□ -1.12
LINC00649-202ENST00000400353 MCRIP2Q9BUT9 160 aaKnown RBP8.06□□□□□ -1.12
LINC00649-202ENST00000400353 IGHV4OR15-8A0A075B7B6 117 aa8.06□□□□□ -1.12
LINC00649-202ENST00000400353 A0A087WW49 117 aa8.06□□□□□ -1.12
LINC00649-202ENST00000400353 TEX48A0A1B0GUV7 120 aa8.06□□□□□ -1.12
LINC00649-202ENST00000400353 SRD5A1P18405 259 aa8.06□□□□□ -1.12
LINC00649-202ENST00000400353 DEFB1P60022 68 aa8.06□□□□□ -1.12
LINC00649-202ENST00000400353 ORMDL2Q53FV1 153 aa8.06□□□□□ -1.12
LINC00649-202ENST00000400353 BVES-AS1Q5T3Y7 98 aa8.06□□□□□ -1.12
LINC00649-202ENST00000400353 POM121L12Q8N7R1 296 aa8.06□□□□□ -1.12
LINC00649-202ENST00000400353 OR9G4Q8NGQ1 327 aa8.06□□□□□ -1.12
LINC00649-202ENST00000400353 SMIM2Q9BVW6 85 aa8.06□□□□□ -1.12
LINC00649-202ENST00000400353 A0A0J9YX75 114 aa8.05□□□□□ -1.12
LINC00649-202ENST00000400353 RNASE3P12724 160 aaKnown RBP8.05□□□□□ -1.12
LINC00649-202ENST00000400353 EDN2P20800 178 aa8.05□□□□□ -1.12
LINC00649-202ENST00000400353 HOXD3P31249 432 aaPredicted RBP8.05□□□□□ -1.12
LINC00649-202ENST00000400353 SYNJ2BPP57105 145 aa8.05□□□□□ -1.12
LINC00649-202ENST00000400353 FXYD7P58549 80 aa8.05□□□□□ -1.12
LINC00649-202ENST00000400353 KIR3DS1Q14943 382 aa8.05□□□□□ -1.12
LINC00649-202ENST00000400353 DNAJC30Q96LL9 226 aa8.05□□□□□ -1.12
LINC00649-202ENST00000400353 CYSLTR1Q9Y271 337 aa8.05□□□□□ -1.12
LINC00649-202ENST00000400353 TRAV2A0A0B4J234 112 aa8.04□□□□□ -1.12
LINC00649-202ENST00000400353 GAGE12JA6NER3 117 aa8.04□□□□□ -1.12
LINC00649-202ENST00000400353 GAGE7O76087 117 aa8.04□□□□□ -1.12
LINC00649-202ENST00000400353 GAGE12FP0CL80 117 aa8.04□□□□□ -1.12
LINC00649-202ENST00000400353 GAGE12GP0CL81 117 aa8.04□□□□□ -1.12
LINC00649-202ENST00000400353 GAGE12IP0CL82 117 aa8.04□□□□□ -1.12
LINC00649-202ENST00000400353 GAGE4Q13068 117 aa8.04□□□□□ -1.12
LINC00649-202ENST00000400353 TMEM126AQ9H061 195 aa8.04□□□□□ -1.12
LINC00649-202ENST00000400353 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.04□□□□□ -1.12
LINC00649-202ENST00000400353 TRAV26-2A0A0B4J265 109 aa8.04□□□□□ -1.12
LINC00649-202ENST00000400353 GNRH2O43555 120 aa8.04□□□□□ -1.12
LINC00649-202ENST00000400353 PRSS1P07477 247 aa8.04□□□□□ -1.12
LINC00649-202ENST00000400353 ZNF688P0C7X2 276 aa8.04□□□□□ -1.12
LINC00649-202ENST00000400353 ZMAT4Q9H898 229 aa8.04□□□□□ -1.12
LINC00649-202ENST00000400353 LINC01549A6NIU2 74 aa8.03□□□□□ -1.12
LINC00649-202ENST00000400353 MGPP08493 103 aa8.03□□□□□ -1.12
LINC00649-202ENST00000400353 TCTAP57738 103 aa8.03□□□□□ -1.12
LINC00649-202ENST00000400353 SUMO2P61956 95 aaKnown RBP8.03□□□□□ -1.12
LINC00649-202ENST00000400353 KRTAP1-3Q8IUG1 177 aa8.03□□□□□ -1.12
LINC00649-202ENST00000400353 C14orf178Q8N769 122 aaPredicted RBP8.03□□□□□ -1.12
LINC00649-202ENST00000400353 C18orf15Q96N68 181 aa8.03□□□□□ -1.12
LINC00649-202ENST00000400353 PEMTQ9UBM1 199 aa8.03□□□□□ -1.12
LINC00649-202ENST00000400353 LINC01619G3V211 115 aa8.02□□□□□ -1.12
LINC00649-202ENST00000400353 KIR2DL5BQ8NHK3 375 aa8.02□□□□□ -1.12
LINC00649-202ENST00000400353 RASL10AQ92737 203 aa8.02□□□□□ -1.12
LINC00649-202ENST00000400353 CR1P17927 2039 aa8.02□□□□□ -1.13
LINC00649-202ENST00000400353 NUDT3O95989 172 aa8.02□□□□□ -1.13
LINC00649-202ENST00000400353 IGKCP01834 107 aa8.02□□□□□ -1.13
LINC00649-202ENST00000400353 RPL24P83731 157 aaKnown RBP8.02□□□□□ -1.13
LINC00649-202ENST00000400353 MPV17L2Q567V2 206 aa8.02□□□□□ -1.13
LINC00649-202ENST00000400353 SYT8Q8NBV8 401 aa8.02□□□□□ -1.13
LINC00649-202ENST00000400353 C4orf3Q8WVX3 66 aa8.02□□□□□ -1.13
LINC00649-202ENST00000400353 CREBBPQ92793 2442 aa8.02□□□□□ -1.13
LINC00649-202ENST00000400353 PRRC2AP48634 2157 aaKnown RBP8.01□□□□□ -1.13
LINC00649-202ENST00000400353 ITPR3Q14573 2671 aa8.01□□□□□ -1.13
LINC00649-202ENST00000400353 TRAV12-3A0A0B4J271 114 aa8.01□□□□□ -1.13
LINC00649-202ENST00000400353 RS1O15537 224 aa8.01□□□□□ -1.13
LINC00649-202ENST00000400353 DPM2O94777 84 aa8.01□□□□□ -1.13
LINC00649-202ENST00000400353 CD7P09564 240 aa8.01□□□□□ -1.13
LINC00649-202ENST00000400353 FGF6P10767 208 aa8.01□□□□□ -1.13
LINC00649-202ENST00000400353 C9orf85Q96MD7 179 aa8.01□□□□□ -1.13
LINC00649-202ENST00000400353 FOXC2Q99958 501 aa8.01□□□□□ -1.13
LINC00649-202ENST00000400353 DKK2Q9UBU2 259 aa8.01□□□□□ -1.13
LINC00649-202ENST00000400353 TRAV12-1A0A0B4J245 112 aa8.01□□□□□ -1.13
LINC00649-202ENST00000400353 SPINK8P0C7L1 97 aa8.01□□□□□ -1.13
LINC00649-202ENST00000400353 NHLRC4P0CG21 123 aaPredicted RBP8.01□□□□□ -1.13
LINC00649-202ENST00000400353 HLA-DRB4P13762 266 aa8.01□□□□□ -1.13
LINC00649-202ENST00000400353 MRPL23Q16540 153 aaKnown RBP8.01□□□□□ -1.13
LINC00649-202ENST00000400353 TOMM6Q96B49 74 aa8.01□□□□□ -1.13
LINC00649-202ENST00000400353 KIF25-AS1Q9Y6Z4 181 aa8.01□□□□□ -1.13
LINC00649-202ENST00000400353 HLA-DRB4X5D2U9 266 aa8.01□□□□□ -1.13
LINC00649-202ENST00000400353 OTOGQ6ZRI0 2925 aa8□□□□□ -1.13
LINC00649-202ENST00000400353 TRGV11A0A075B6L2 103 aa8□□□□□ -1.13
LINC00649-202ENST00000400353 IGHV1OR15-1A0A075B7D0 117 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms