RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 GAGE1Q13065 139 aa10.61□□□□□ -0.71
SCAF4-202ENST00000399804 FABP2P12104 132 aa10.61□□□□□ -0.71
SCAF4-202ENST00000399804 KIR3DS1Q14943 382 aa10.61□□□□□ -0.71
SCAF4-202ENST00000399804 PSMG3-AS1Q96PY0 264 aa10.61□□□□□ -0.71
SCAF4-202ENST00000399804 CHCHD5Q9BSY4 110 aa10.61□□□□□ -0.71
SCAF4-202ENST00000399804 ZNF815PA8K554 130 aa10.61□□□□□ -0.71
SCAF4-202ENST00000399804 AZU1P20160 251 aa10.61□□□□□ -0.71
SCAF4-202ENST00000399804 PLNP26678 52 aa10.61□□□□□ -0.71
SCAF4-202ENST00000399804 RPL24P83731 157 aaKnown RBP10.61□□□□□ -0.71
SCAF4-202ENST00000399804 C20orf78Q9BR46 151 aa10.61□□□□□ -0.71
SCAF4-202ENST00000399804 CD5LO43866 347 aa10.6□□□□□ -0.71
SCAF4-202ENST00000399804 SMIM13P0DJ93 91 aa10.6□□□□□ -0.71
SCAF4-202ENST00000399804 CFAP46Q8IYW2 2715 aa10.6□□□□□ -0.71
SCAF4-202ENST00000399804 K7EQG2 157 aa10.6□□□□□ -0.71
SCAF4-202ENST00000399804 LYRM7Q5U5X0 104 aa10.6□□□□□ -0.71
SCAF4-202ENST00000399804 GAGE12BA1L429 117 aa10.6□□□□□ -0.71
SCAF4-202ENST00000399804 GAGE7O76087 117 aa10.6□□□□□ -0.71
SCAF4-202ENST00000399804 IGLC6P0CF74 106 aa10.6□□□□□ -0.71
SCAF4-202ENST00000399804 GAGE12FP0CL80 117 aa10.6□□□□□ -0.71
SCAF4-202ENST00000399804 GAGE12GP0CL81 117 aa10.6□□□□□ -0.71
SCAF4-202ENST00000399804 GAGE12IP0CL82 117 aa10.6□□□□□ -0.71
SCAF4-202ENST00000399804 MEIG1Q5JSS6 88 aa10.6□□□□□ -0.71
SCAF4-202ENST00000399804 ESDP10768 282 aa10.6□□□□□ -0.71
SCAF4-202ENST00000399804 MRPL35Q9NZE8 188 aaKnown RBP10.6□□□□□ -0.71
SCAF4-202ENST00000399804 LOC400499M0QZD8 3231 aa10.59□□□□□ -0.71
SCAF4-202ENST00000399804 LGALS9BQ3B8N2 356 aa10.59□□□□□ -0.71
SCAF4-202ENST00000399804 LGALS9CQ6DKI2 356 aa10.59□□□□□ -0.71
SCAF4-202ENST00000399804 TOMM7Q9P0U1 55 aa10.59□□□□□ -0.71
SCAF4-202ENST00000399804 MDFICQ9P1T7 246 aa10.59□□□□□ -0.71
SCAF4-202ENST00000399804 DKK2Q9UBU2 259 aa10.59□□□□□ -0.71
SCAF4-202ENST00000399804 MUC3AQ02505 3323 aa10.59□□□□□ -0.71
SCAF4-202ENST00000399804 ADGRG4Q8IZF6 3080 aa10.59□□□□□ -0.71
SCAF4-202ENST00000399804 IGHV3-38A0A0C4DH36 116 aa10.59□□□□□ -0.71
SCAF4-202ENST00000399804 M0R2P5 195 aa10.59□□□□□ -0.71
SCAF4-202ENST00000399804 PRADC1Q9BSG0 188 aa10.59□□□□□ -0.71
SCAF4-202ENST00000399804 CIRBPQ14011 172 aaKnown RBP10.59□□□□□ -0.71
SCAF4-202ENST00000399804 C18orf65Q6ZTR6 163 aa10.59□□□□□ -0.71
SCAF4-202ENST00000399804 NHP2Q9NX24 153 aaKnown RBP10.59□□□□□ -0.71
SCAF4-202ENST00000399804 H3BRM9 83 aa10.58□□□□□ -0.72
SCAF4-202ENST00000399804 LGALS9O00182 355 aa10.58□□□□□ -0.72
SCAF4-202ENST00000399804 APOMO95445 188 aa10.58□□□□□ -0.72
SCAF4-202ENST00000399804 ZNF493Q6ZR52 646 aa10.58□□□□□ -0.72
SCAF4-202ENST00000399804 ZFAND2AQ8N6M9 145 aa10.58□□□□□ -0.72
SCAF4-202ENST00000399804 JPT2Q9H910 190 aa10.58□□□□□ -0.72
SCAF4-202ENST00000399804 ASPMQ8IZT6 3477 aa10.58□□□□□ -0.72
SCAF4-202ENST00000399804 I3L3M4 83 aa10.58□□□□□ -0.72
SCAF4-202ENST00000399804 UBE2V1Q13404 147 aa10.58□□□□□ -0.72
SCAF4-202ENST00000399804 U3KQE9 123 aa10.58□□□□□ -0.72
SCAF4-202ENST00000399804 GAGE12JA6NER3 117 aa10.58□□□□□ -0.72
SCAF4-202ENST00000399804 J3QR89 54 aa10.58□□□□□ -0.72
SCAF4-202ENST00000399804 GAGE4Q13068 117 aa10.58□□□□□ -0.72
SCAF4-202ENST00000399804 GAGE5Q13069 117 aa10.58□□□□□ -0.72
SCAF4-202ENST00000399804 GAGE13Q4V321 117 aa10.58□□□□□ -0.72
SCAF4-202ENST00000399804 ZNRF2Q8NHG8 242 aa10.58□□□□□ -0.72
SCAF4-202ENST00000399804 SPXQ9BT56 116 aa10.58□□□□□ -0.72
SCAF4-202ENST00000399804 COX11Q9Y6N1 276 aa10.58□□□□□ -0.72
SCAF4-202ENST00000399804 USP24Q9UPU5 2620 aa10.58□□□□□ -0.72
SCAF4-202ENST00000399804 ORAOV1Q8WV07 137 aa10.57□□□□□ -0.72
SCAF4-202ENST00000399804 CRIP2P52943 208 aaPredicted RBP10.57□□□□□ -0.72
SCAF4-202ENST00000399804 SRSF2Q01130 221 aaKnown RBP10.57□□□□□ -0.72
SCAF4-202ENST00000399804 NAA38Q9BRA0 125 aaKnown RBP10.57□□□□□ -0.72
SCAF4-202ENST00000399804 ADARB2-AS1A8MUL3 147 aa10.56□□□□□ -0.72
SCAF4-202ENST00000399804 HSD52Q0P140 79 aa10.56□□□□□ -0.72
SCAF4-202ENST00000399804 SUMO4Q6EEV6 95 aa10.56□□□□□ -0.72
SCAF4-202ENST00000399804 TRBV7-9A0A0J9YWB2 115 aa10.56□□□□□ -0.72
SCAF4-202ENST00000399804 EDN2P20800 178 aa10.56□□□□□ -0.72
SCAF4-202ENST00000399804 NOP10Q9NPE3 64 aaKnown RBP10.56□□□□□ -0.72
SCAF4-202ENST00000399804 INAFM1C9JVW0 142 aa10.55□□□□□ -0.72
SCAF4-202ENST00000399804 H3BUT2 72 aa10.55□□□□□ -0.72
SCAF4-202ENST00000399804 MRPL52Q86TS9 123 aaKnown RBP10.55□□□□□ -0.72
SCAF4-202ENST00000399804 MRPS16Q9Y3D3 137 aaKnown RBP10.55□□□□□ -0.72
SCAF4-202ENST00000399804 DEFB114Q30KQ6 69 aa10.55□□□□□ -0.72
SCAF4-202ENST00000399804 ADAMTSL5Q6ZMM2 481 aa10.55□□□□□ -0.72
SCAF4-202ENST00000399804 C11orf21Q9P2W6 132 aa10.55□□□□□ -0.72
SCAF4-202ENST00000399804 MAP6D1Q9H9H5 199 aa10.55□□□□□ -0.72
SCAF4-202ENST00000399804 TRAV25A0A0B4J276 109 aa10.54□□□□□ -0.72
SCAF4-202ENST00000399804 Q8N976 141 aa10.54□□□□□ -0.72
SCAF4-202ENST00000399804 ATMQ13315 3056 aa10.54□□□□□ -0.72
SCAF4-202ENST00000399804 TRAV13-1A0A0B4J241 112 aa10.54□□□□□ -0.72
SCAF4-202ENST00000399804 HLA-DRB4P13762 266 aa10.54□□□□□ -0.72
SCAF4-202ENST00000399804 PMVKQ15126 192 aa10.54□□□□□ -0.72
SCAF4-202ENST00000399804 OR5A1Q8NGJ0 315 aa10.54□□□□□ -0.72
SCAF4-202ENST00000399804 HLA-DRB4X5D2U9 266 aa10.54□□□□□ -0.72
SCAF4-202ENST00000399804 F8VRH5 84 aa10.54□□□□□ -0.72
SCAF4-202ENST00000399804 LINC01006Q8NI28 216 aa10.54□□□□□ -0.72
SCAF4-202ENST00000399804 A0A0U1RRA0 63 aa10.53□□□□□ -0.72
SCAF4-202ENST00000399804 SFTA2Q6UW10 78 aa10.53□□□□□ -0.72
SCAF4-202ENST00000399804 SMR3AQ99954 134 aa10.53□□□□□ -0.72
SCAF4-202ENST00000399804 SEC11AP67812 179 aa10.53□□□□□ -0.72
SCAF4-202ENST00000399804 PRR9Q5T870 116 aa10.53□□□□□ -0.72
SCAF4-202ENST00000399804 Q6ZQT7 251 aa10.53□□□□□ -0.72
SCAF4-202ENST00000399804 MED14OSP0DP75 135 aa10.53□□□□□ -0.72
SCAF4-202ENST00000399804 IGSF10Q6WRI0 2623 aa10.53□□□□□ -0.72
SCAF4-202ENST00000399804 H3BMM0 161 aa10.52□□□□□ -0.72
SCAF4-202ENST00000399804 CHAC1Q9BUX1 264 aa10.52□□□□□ -0.73
SCAF4-202ENST00000399804 COX8AP10176 69 aa10.52□□□□□ -0.73
SCAF4-202ENST00000399804 TMEM141Q96I45 108 aa10.52□□□□□ -0.73
SCAF4-202ENST00000399804 TRAV2A0A0B4J234 112 aa10.52□□□□□ -0.73
SCAF4-202ENST00000399804 PRSS29PA6NIE9 313 aa10.52□□□□□ -0.73
SCAF4-202ENST00000399804 LY6G6DO95868 133 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms