RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 TMEM263Q8WUH6 116 aaKnown RBP9.48□□□□□ -0.89
CACNA1C-219ENST00000399649 CTSGP08311 255 aa9.48□□□□□ -0.89
CACNA1C-219ENST00000399649 PRR15LQ9BU68 103 aa9.48□□□□□ -0.89
CACNA1C-219ENST00000399649 CABIN1Q9Y6J0 2220 aa9.47□□□□□ -0.89
CACNA1C-219ENST00000399649 MGAMO43451 1857 aa9.47□□□□□ -0.89
CACNA1C-219ENST00000399649 SPRNQ5BIV9 151 aa9.47□□□□□ -0.89
CACNA1C-219ENST00000399649 FXYD2P54710 66 aa9.47□□□□□ -0.89
CACNA1C-219ENST00000399649 SIP14410 1827 aa9.47□□□□□ -0.89
CACNA1C-219ENST00000399649 IGKV2D-26A0A0A0MRZ7 120 aa9.47□□□□□ -0.89
CACNA1C-219ENST00000399649 C11orf53Q8IXP5 236 aa9.47□□□□□ -0.89
CACNA1C-219ENST00000399649 WDR81Q562E7 1941 aa9.47□□□□□ -0.89
CACNA1C-219ENST00000399649 KIAA1671Q9BY89 1806 aa9.47□□□□□ -0.89
CACNA1C-219ENST00000399649 RSPO1Q2MKA7 263 aaPredicted RBP9.47□□□□□ -0.89
CACNA1C-219ENST00000399649 TPRP12270 2363 aaKnown RBP9.47□□□□□ -0.89
CACNA1C-219ENST00000399649 IGKV2-24A0A0C4DH68 120 aa9.46□□□□□ -0.89
CACNA1C-219ENST00000399649 WFDC2Q14508 124 aa9.46□□□□□ -0.89
CACNA1C-219ENST00000399649 Q8N9W7 124 aa9.46□□□□□ -0.89
CACNA1C-219ENST00000399649 C10orf105Q8TEF2 133 aa9.46□□□□□ -0.89
CACNA1C-219ENST00000399649 WFDC11Q8NEX6 87 aa9.46□□□□□ -0.9
CACNA1C-219ENST00000399649 PHF3Q92576 2039 aaKnown RBP9.46□□□□□ -0.9
CACNA1C-219ENST00000399649 LRCOL1A6NCL2 159 aa9.46□□□□□ -0.9
CACNA1C-219ENST00000399649 DOCK11Q5JSL3 2073 aa9.45□□□□□ -0.9
CACNA1C-219ENST00000399649 TMEM89A2RUT3 159 aa9.45□□□□□ -0.9
CACNA1C-219ENST00000399649 IGKV1-17P01599 117 aa9.45□□□□□ -0.9
CACNA1C-219ENST00000399649 TRAV23DV6A0A075B6W5 121 aa9.45□□□□□ -0.9
CACNA1C-219ENST00000399649 MPLKIPQ8TAP9 179 aa9.45□□□□□ -0.9
CACNA1C-219ENST00000399649 C11orf45Q8TAV5 145 aa9.45□□□□□ -0.9
CACNA1C-219ENST00000399649 PRO0255Q9UI72 69 aa9.45□□□□□ -0.9
CACNA1C-219ENST00000399649 FNDC1Q4ZHG4 1894 aaPredicted RBP9.45□□□□□ -0.9
CACNA1C-219ENST00000399649 PRAC2D3DTV9 90 aa9.45□□□□□ -0.9
CACNA1C-219ENST00000399649 Q8NFD4 153 aa9.45□□□□□ -0.9
CACNA1C-219ENST00000399649 HEATR5AQ86XA9 2040 aa9.45□□□□□ -0.9
CACNA1C-219ENST00000399649 FAM19A1Q7Z5A9 133 aa9.44□□□□□ -0.9
CACNA1C-219ENST00000399649 HIGD2AQ9BW72 106 aa9.44□□□□□ -0.9
CACNA1C-219ENST00000399649 INSL3P51460 131 aa9.44□□□□□ -0.9
CACNA1C-219ENST00000399649 UFSP1Q6NVU6 142 aa9.44□□□□□ -0.9
CACNA1C-219ENST00000399649 DOCK9Q9BZ29 2069 aa9.44□□□□□ -0.9
CACNA1C-219ENST00000399649 TRBV6-1A0A0K0K1D8 114 aa9.44□□□□□ -0.9
CACNA1C-219ENST00000399649 ZNF318Q5VUA4 2279 aa9.44□□□□□ -0.9
CACNA1C-219ENST00000399649 LYPD6BQ8NI32 183 aa9.44□□□□□ -0.9
CACNA1C-219ENST00000399649 CACNA1IQ9P0X4 2223 aa9.44□□□□□ -0.9
CACNA1C-219ENST00000399649 MIAQ16674 131 aa9.43□□□□□ -0.9
CACNA1C-219ENST00000399649 Q6ZUT4 128 aa9.43□□□□□ -0.9
CACNA1C-219ENST00000399649 C3orf22Q8N5N4 141 aa9.43□□□□□ -0.9
CACNA1C-219ENST00000399649 RP1L1Q8IWN7 2480 aaPredicted RBP9.43□□□□□ -0.9
CACNA1C-219ENST00000399649 CACNA1GO43497 2377 aa9.43□□□□□ -0.9
CACNA1C-219ENST00000399649 PLXNA4Q9HCM2 1894 aa9.43□□□□□ -0.9
CACNA1C-219ENST00000399649 KIAA2026Q5HYC2 2103 aa9.43□□□□□ -0.9
CACNA1C-219ENST00000399649 PATE2Q6UY27 113 aa9.43□□□□□ -0.9
CACNA1C-219ENST00000399649 MRPL55Q7Z7F7 128 aaKnown RBP9.43□□□□□ -0.9
CACNA1C-219ENST00000399649 TCF20Q9UGU0 1960 aaKnown RBP9.43□□□□□ -0.9
CACNA1C-219ENST00000399649 CTRLP40313 264 aa9.42□□□□□ -0.9
CACNA1C-219ENST00000399649 CDPF1Q6NVV7 123 aa9.42□□□□□ -0.9
CACNA1C-219ENST00000399649 SIRPDQ9H106 197 aa9.42□□□□□ -0.9
CACNA1C-219ENST00000399649 MDFICQ9P1T7 246 aa9.42□□□□□ -0.9
CACNA1C-219ENST00000399649 APC2O95996 2303 aa9.42□□□□□ -0.9
CACNA1C-219ENST00000399649 LINC00643Q86TS7 51 aa9.42□□□□□ -0.9
CACNA1C-219ENST00000399649 FRMPD3Q5JV73 1810 aa9.41□□□□□ -0.9
CACNA1C-219ENST00000399649 ZFAND2AQ8N6M9 145 aa9.41□□□□□ -0.9
CACNA1C-219ENST00000399649 A0A087WZ39 114 aa9.41□□□□□ -0.9
CACNA1C-219ENST00000399649 CRYGDP07320 174 aa9.41□□□□□ -0.9
CACNA1C-219ENST00000399649 PLXND1Q9Y4D7 1925 aa9.41□□□□□ -0.9
CACNA1C-219ENST00000399649 REG3AQ06141 175 aa9.41□□□□□ -0.9
CACNA1C-219ENST00000399649 ZNF524Q96C55 264 aa9.41□□□□□ -0.9
CACNA1C-219ENST00000399649 MAP6D1Q9H9H5 199 aa9.4□□□□□ -0.9
CACNA1C-219ENST00000399649 LINC00269Q8N2A0 174 aa9.4□□□□□ -0.9
CACNA1C-219ENST00000399649 G3V4G9 280 aa9.4□□□□□ -0.9
CACNA1C-219ENST00000399649 TRAV26-1A0A087WT03 109 aa9.4□□□□□ -0.9
CACNA1C-219ENST00000399649 TRBV10-1A0A0K0K1A3 114 aa9.4□□□□□ -0.9
CACNA1C-219ENST00000399649 NUPR1O60356 82 aa9.4□□□□□ -0.9
CACNA1C-219ENST00000399649 NRGNQ92686 78 aa9.4□□□□□ -0.91
CACNA1C-219ENST00000399649 WFDC10BQ8IUB3 73 aa9.39□□□□□ -0.91
CACNA1C-219ENST00000399649 TNRC6AQ8NDV7 1962 aaKnown RBP9.39□□□□□ -0.91
CACNA1C-219ENST00000399649 VWA8A3KMH1 1905 aa9.39□□□□□ -0.91
CACNA1C-219ENST00000399649 NDUFA11Q86Y39 141 aa9.39□□□□□ -0.91
CACNA1C-219ENST00000399649 ODF1Q14990 250 aa9.39□□□□□ -0.91
CACNA1C-219ENST00000399649 A0A096LNI7 61 aa9.39□□□□□ -0.91
CACNA1C-219ENST00000399649 FAM236DA0A1B0GTK5 79 aa9.39□□□□□ -0.91
CACNA1C-219ENST00000399649 FAM236CP0DP71 79 aa9.39□□□□□ -0.91
CACNA1C-219ENST00000399649 HIST2H2BDQ6DRA6 164 aa9.39□□□□□ -0.91
CACNA1C-219ENST00000399649 NDUFC2-KCTD14E9PQ53 114 aa9.39□□□□□ -0.91
CACNA1C-219ENST00000399649 HILS1P60008 231 aa9.39□□□□□ -0.91
CACNA1C-219ENST00000399649 C20orf203Q8NBC4 194 aa9.39□□□□□ -0.91
CACNA1C-219ENST00000399649 TTTY13Q9BZ97 58 aa9.39□□□□□ -0.91
CACNA1C-219ENST00000399649 ARFGEF3Q5TH69 2177 aa9.38□□□□□ -0.91
CACNA1C-219ENST00000399649 PLXNA2O75051 1894 aa9.38□□□□□ -0.91
CACNA1C-219ENST00000399649 IGKV1D-37A0A075B6S9 117 aa9.38□□□□□ -0.91
CACNA1C-219ENST00000399649 UBE2D1P51668 147 aa9.38□□□□□ -0.91
CACNA1C-219ENST00000399649 PRR4Q16378 134 aa9.38□□□□□ -0.91
CACNA1C-219ENST00000399649 KRTAP27-1Q3LI81 207 aa9.38□□□□□ -0.91
CACNA1C-219ENST00000399649 HELZP42694 1942 aaKnown RBP9.38□□□□□ -0.91
CACNA1C-219ENST00000399649 FAM240AA0A1B0GVK7 77 aa9.38□□□□□ -0.91
CACNA1C-219ENST00000399649 TCL1BO95988 128 aa9.38□□□□□ -0.91
CACNA1C-219ENST00000399649 MLST8Q9BVC4 326 aa9.38□□□□□ -0.91
CACNA1C-219ENST00000399649 ADORA2A-AS1P86434 159 aa9.38□□□□□ -0.91
CACNA1C-219ENST00000399649 FAM167A-AS1Q96KT0 104 aa9.38□□□□□ -0.91
CACNA1C-219ENST00000399649 A0A0J9YX75 114 aa9.37□□□□□ -0.91
CACNA1C-219ENST00000399649 ZFP36P26651 326 aaKnown RBP9.37□□□□□ -0.91
CACNA1C-219ENST00000399649 COA6Q5JTJ3 125 aaKnown RBP9.37□□□□□ -0.91
CACNA1C-219ENST00000399649 CEMP1Q6PRD7 247 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms