RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 H3BUA1 57 aa8.67□□□□□ -1.02
CACNA1C-217ENST00000399641 BRCA1P38398 1863 aaKnown RBP8.67□□□□□ -1.02
CACNA1C-217ENST00000399641 ODF1Q14990 250 aa8.67□□□□□ -1.02
CACNA1C-217ENST00000399641 Q6Q795 121 aa8.67□□□□□ -1.02
CACNA1C-217ENST00000399641 NUP214P35658 2090 aaPredicted RBP8.67□□□□□ -1.02
CACNA1C-217ENST00000399641 LGALS9BQ3B8N2 356 aa8.67□□□□□ -1.02
CACNA1C-217ENST00000399641 LGALS9CQ6DKI2 356 aa8.67□□□□□ -1.02
CACNA1C-217ENST00000399641 Q8TCH9 128 aa8.67□□□□□ -1.02
CACNA1C-217ENST00000399641 FGF23Q9GZV9 251 aaPredicted RBP8.67□□□□□ -1.02
CACNA1C-217ENST00000399641 SRCAPQ6ZRS2 3230 aa8.66□□□□□ -1.02
CACNA1C-217ENST00000399641 DAZAP2Q15038 168 aaPredicted RBP8.66□□□□□ -1.02
CACNA1C-217ENST00000399641 ACACAQ13085 2346 aa8.66□□□□□ -1.02
CACNA1C-217ENST00000399641 Q8N9L7 120 aa8.66□□□□□ -1.02
CACNA1C-217ENST00000399641 TPSG1Q9NRR2 321 aa8.66□□□□□ -1.02
CACNA1C-217ENST00000399641 LRRC75A-AS1Q8N1F1 130 aa8.65□□□□□ -1.02
CACNA1C-217ENST00000399641 RPL39P62891 51 aaKnown RBP8.65□□□□□ -1.02
CACNA1C-217ENST00000399641 WFDC2Q14508 124 aa8.65□□□□□ -1.02
CACNA1C-217ENST00000399641 PTH2Q96A98 100 aa8.65□□□□□ -1.02
CACNA1C-217ENST00000399641 PMAIP1Q13794 54 aa8.65□□□□□ -1.02
CACNA1C-217ENST00000399641 MIR7-3HGQ8N6C7 128 aa8.65□□□□□ -1.02
CACNA1C-217ENST00000399641 FHL1Q13642 323 aa8.65□□□□□ -1.02
CACNA1C-217ENST00000399641 PI4KAP42356 2102 aa8.65□□□□□ -1.03
CACNA1C-217ENST00000399641 C5orf63A6NC05 138 aa8.64□□□□□ -1.03
CACNA1C-217ENST00000399641 C15orf62A8K5M9 175 aa8.64□□□□□ -1.03
CACNA1C-217ENST00000399641 TMEM256-PLSCR3K7ERE1 68 aa8.64□□□□□ -1.03
CACNA1C-217ENST00000399641 RALGAPA2Q2PPJ7 1873 aa8.64□□□□□ -1.03
CACNA1C-217ENST00000399641 CXCL5P42830 114 aa8.64□□□□□ -1.03
CACNA1C-217ENST00000399641 SPINT4Q6UDR6 99 aa8.64□□□□□ -1.03
CACNA1C-217ENST00000399641 NCOR1P1Q9H4R4 102 aa8.64□□□□□ -1.03
CACNA1C-217ENST00000399641 PSME4Q14997 1843 aa8.64□□□□□ -1.03
CACNA1C-217ENST00000399641 LY6G6EA0A0G2JKS1 128 aa8.64□□□□□ -1.03
CACNA1C-217ENST00000399641 FSHBP01225 129 aa8.64□□□□□ -1.03
CACNA1C-217ENST00000399641 A0A0G2JMZ2 1700 aa8.64□□□□□ -1.03
CACNA1C-217ENST00000399641 LRRC37A2A6NM11 1700 aa8.64□□□□□ -1.03
CACNA1C-217ENST00000399641 IGLC1P0CG04 106 aa8.64□□□□□ -1.03
CACNA1C-217ENST00000399641 LOXP28300 417 aaPredicted RBP8.64□□□□□ -1.03
CACNA1C-217ENST00000399641 SOSTDC1Q6X4U4 206 aa8.64□□□□□ -1.03
CACNA1C-217ENST00000399641 ANKRD36A6QL64 1941 aa8.64□□□□□ -1.03
CACNA1C-217ENST00000399641 ARFGEF3Q5TH69 2177 aa8.63□□□□□ -1.03
CACNA1C-217ENST00000399641 TRAV1-1A0A0B4J248 108 aa8.63□□□□□ -1.03
CACNA1C-217ENST00000399641 H0YGX0 51 aa8.63□□□□□ -1.03
CACNA1C-217ENST00000399641 AJUBAQ96IF1 538 aa8.63□□□□□ -1.03
CACNA1C-217ENST00000399641 CSDC2Q9Y534 153 aaKnown RBP8.63□□□□□ -1.03
CACNA1C-217ENST00000399641 A0A0G2JRQ6 117 aa8.63□□□□□ -1.03
CACNA1C-217ENST00000399641 A0A0J9YXV3 536 aa8.63□□□□□ -1.03
CACNA1C-217ENST00000399641 BEAN1Q3B7T3 259 aa8.63□□□□□ -1.03
CACNA1C-217ENST00000399641 NFE4Q86UQ8 179 aa8.63□□□□□ -1.03
CACNA1C-217ENST00000399641 NRXN2Q9P2S2 1712 aa8.63□□□□□ -1.03
CACNA1C-217ENST00000399641 IGKV2-28A0A075B6P5 120 aa8.63□□□□□ -1.03
CACNA1C-217ENST00000399641 IGKV2D-28P01615 120 aa8.63□□□□□ -1.03
CACNA1C-217ENST00000399641 VOPP1Q96AW1 172 aa8.63□□□□□ -1.03
CACNA1C-217ENST00000399641 U3KQA8 63 aa8.62□□□□□ -1.03
CACNA1C-217ENST00000399641 CNOT1A5YKK6 2376 aaKnown RBP8.62□□□□□ -1.03
CACNA1C-217ENST00000399641 PRLHP81277 87 aa8.62□□□□□ -1.03
CACNA1C-217ENST00000399641 PDE6HQ13956 83 aa8.62□□□□□ -1.03
CACNA1C-217ENST00000399641 FANCMQ8IYD8 2048 aa8.62□□□□□ -1.03
CACNA1C-217ENST00000399641 C4orf3Q8WVX3 66 aa8.62□□□□□ -1.03
CACNA1C-217ENST00000399641 DOCK7Q96N67 2140 aa8.62□□□□□ -1.03
CACNA1C-217ENST00000399641 YLPM1P49750 1951 aaKnown RBP8.62□□□□□ -1.03
CACNA1C-217ENST00000399641 C22orf34Q6ZV56 151 aa8.62□□□□□ -1.03
CACNA1C-217ENST00000399641 C20orf78Q9BR46 151 aa8.61□□□□□ -1.03
CACNA1C-217ENST00000399641 XIRP1Q702N8 1843 aaKnown RBP8.61□□□□□ -1.03
CACNA1C-217ENST00000399641 TICRRQ7Z2Z1 1910 aa8.61□□□□□ -1.03
CACNA1C-217ENST00000399641 CEMP1Q6PRD7 247 aaPredicted RBP8.61□□□□□ -1.03
CACNA1C-217ENST00000399641 CRIPAKQ8N1N5 446 aa8.61□□□□□ -1.03
CACNA1C-217ENST00000399641 DIAPH2-AS1Q14236 149 aa8.61□□□□□ -1.03
CACNA1C-217ENST00000399641 DAZ4Q86SG3 579 aaKnown RBP8.61□□□□□ -1.03
CACNA1C-217ENST00000399641 ODF3L1Q8IXM7 274 aa8.61□□□□□ -1.03
CACNA1C-217ENST00000399641 RPL37AP8A6NKH3 93 aa8.6□□□□□ -1.03
CACNA1C-217ENST00000399641 H3BRN7 92 aa8.6□□□□□ -1.03
CACNA1C-217ENST00000399641 YPEL3P61236 119 aaPredicted RBP8.6□□□□□ -1.03
CACNA1C-217ENST00000399641 BLCAPP62952 87 aa8.6□□□□□ -1.03
CACNA1C-217ENST00000399641 H3BT86 120 aa8.6□□□□□ -1.03
CACNA1C-217ENST00000399641 CRYGDP07320 174 aa8.6□□□□□ -1.03
CACNA1C-217ENST00000399641 Q6P435 159 aa8.6□□□□□ -1.03
CACNA1C-217ENST00000399641 ALPK2Q86TB3 2170 aa8.6□□□□□ -1.03
CACNA1C-217ENST00000399641 CIRBP-AS1Q8TBR5 109 aa8.6□□□□□ -1.03
CACNA1C-217ENST00000399641 IGLC6P0CF74 106 aa8.6□□□□□ -1.03
CACNA1C-217ENST00000399641 PYGO2Q9BRQ0 406 aa8.6□□□□□ -1.03
CACNA1C-217ENST00000399641 TTTY13Q9BZ97 58 aa8.6□□□□□ -1.03
CACNA1C-217ENST00000399641 DEFB131BA0A096LNP1 70 aa8.59□□□□□ -1.03
CACNA1C-217ENST00000399641 PSPHP1O15172 72 aa8.59□□□□□ -1.03
CACNA1C-217ENST00000399641 IGF1P05019 195 aa8.59□□□□□ -1.03
CACNA1C-217ENST00000399641 MIFP14174 115 aa8.59□□□□□ -1.03
CACNA1C-217ENST00000399641 HEATR1Q9H583 2144 aaKnown RBP8.59□□□□□ -1.03
CACNA1C-217ENST00000399641 C11orf52Q96A22 123 aa8.59□□□□□ -1.03
CACNA1C-217ENST00000399641 ESRGQ1W209 222 aa8.59□□□□□ -1.03
CACNA1C-217ENST00000399641 KMT2EQ8IZD2 1858 aa8.58□□□□□ -1.04
CACNA1C-217ENST00000399641 ARID1AO14497 2285 aa8.58□□□□□ -1.04
CACNA1C-217ENST00000399641 Q0VG73 95 aa8.58□□□□□ -1.04
CACNA1C-217ENST00000399641 PCOTHQ58A44 107 aa8.58□□□□□ -1.04
CACNA1C-217ENST00000399641 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.58□□□□□ -1.04
CACNA1C-217ENST00000399641 WFDC10AQ9H1F0 79 aa8.58□□□□□ -1.04
CACNA1C-217ENST00000399641 SPTBN1Q01082 2364 aaKnown RBP8.58□□□□□ -1.04
CACNA1C-217ENST00000399641 LINC00269Q8N2A0 174 aa8.58□□□□□ -1.04
CACNA1C-217ENST00000399641 FER1L5A0AVI2 2057 aa8.58□□□□□ -1.04
CACNA1C-217ENST00000399641 A6NDX4 124 aa8.58□□□□□ -1.04
CACNA1C-217ENST00000399641 DAZ2Q13117 558 aaKnown RBP8.58□□□□□ -1.04
CACNA1C-217ENST00000399641 DAZ3Q9NR90 486 aaKnown RBP8.58□□□□□ -1.04
CACNA1C-217ENST00000399641 H3BQ85 93 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms