RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 TRAV12-1A0A0B4J245 112 aa11.27□□□□□ -0.61
RPRD1A-202ENST00000399022 C11orf86A6NJI1 115 aa11.27□□□□□ -0.61
RPRD1A-202ENST00000399022 BAALCQ8WXS3 180 aa11.27□□□□□ -0.61
RPRD1A-202ENST00000399022 LINC01587Q99440 93 aa11.27□□□□□ -0.61
RPRD1A-202ENST00000399022 TRBV6-1A0A0K0K1D8 114 aa11.27□□□□□ -0.61
RPRD1A-202ENST00000399022 CRPP02741 224 aa11.27□□□□□ -0.61
RPRD1A-202ENST00000399022 HOXB4P17483 251 aaPredicted RBP11.27□□□□□ -0.61
RPRD1A-202ENST00000399022 LINC00158P58513 81 aa11.26□□□□□ -0.61
RPRD1A-202ENST00000399022 RNASE13Q5GAN3 156 aaKnown RBP11.26□□□□□ -0.61
RPRD1A-202ENST00000399022 PHLDA1Q8WV24 401 aaPredicted RBP11.26□□□□□ -0.61
RPRD1A-202ENST00000399022 IGHV7-81A0A0B4J1V7 117 aa11.26□□□□□ -0.61
RPRD1A-202ENST00000399022 RBMY1BA6NDE4 496 aaKnown RBP11.26□□□□□ -0.61
RPRD1A-202ENST00000399022 RBMY1EA6NEQ0 496 aaKnown RBP11.26□□□□□ -0.61
RPRD1A-202ENST00000399022 MSMBP08118 114 aa11.26□□□□□ -0.61
RPRD1A-202ENST00000399022 RBMY1DP0C7P1 496 aaKnown RBP11.26□□□□□ -0.61
RPRD1A-202ENST00000399022 RBMY1A1P0DJD3 496 aaKnown RBP11.26□□□□□ -0.61
RPRD1A-202ENST00000399022 RBMY1CP0DJD4 496 aa11.26□□□□□ -0.61
RPRD1A-202ENST00000399022 KNCNA6PVL3 124 aa11.25□□□□□ -0.61
RPRD1A-202ENST00000399022 RPL39P62891 51 aaKnown RBP11.25□□□□□ -0.61
RPRD1A-202ENST00000399022 MRPL23Q16540 153 aaKnown RBP11.25□□□□□ -0.61
RPRD1A-202ENST00000399022 ZFP36P26651 326 aaKnown RBP11.25□□□□□ -0.61
RPRD1A-202ENST00000399022 TRAV13-1A0A0B4J241 112 aa11.25□□□□□ -0.61
RPRD1A-202ENST00000399022 INAFM2P0DMQ5 153 aa11.25□□□□□ -0.61
RPRD1A-202ENST00000399022 F6UB75 175 aa11.24□□□□□ -0.61
RPRD1A-202ENST00000399022 IGHG4P01861 327 aa11.24□□□□□ -0.61
RPRD1A-202ENST00000399022 SYNJ2BPP57105 145 aa11.24□□□□□ -0.61
RPRD1A-202ENST00000399022 Q8N1Y9 231 aa11.24□□□□□ -0.61
RPRD1A-202ENST00000399022 LINC00574Q9H8X3 128 aa11.24□□□□□ -0.61
RPRD1A-202ENST00000399022 TRGV11A0A075B6L2 103 aa11.24□□□□□ -0.61
RPRD1A-202ENST00000399022 FAM223BA6NKX1 122 aa11.24□□□□□ -0.61
RPRD1A-202ENST00000399022 FAM223AQ8IWN6 122 aa11.24□□□□□ -0.61
RPRD1A-202ENST00000399022 PIP4P2Q8N4L2 257 aa11.24□□□□□ -0.61
RPRD1A-202ENST00000399022 USMG5Q96IX5 58 aa11.24□□□□□ -0.61
RPRD1A-202ENST00000399022 IGLV11-55A0A075B6I3 123 aa11.23□□□□□ -0.61
RPRD1A-202ENST00000399022 A0A0J9YXV3 536 aa11.23□□□□□ -0.61
RPRD1A-202ENST00000399022 RBAKDNA6NC62 111 aa11.23□□□□□ -0.61
RPRD1A-202ENST00000399022 CTSGP08311 255 aa11.23□□□□□ -0.61
RPRD1A-202ENST00000399022 DAZ1Q9NQZ3 744 aaKnown RBP11.23□□□□□ -0.61
RPRD1A-202ENST00000399022 TRACP01848 142 aa11.23□□□□□ -0.61
RPRD1A-202ENST00000399022 SZT2Q5T011 3432 aa11.23□□□□□ -0.61
RPRD1A-202ENST00000399022 PAX4O43316 350 aa11.23□□□□□ -0.61
RPRD1A-202ENST00000399022 RNF223E7ERA6 249 aa11.22□□□□□ -0.61
RPRD1A-202ENST00000399022 IGLV2-11P01706 119 aa11.22□□□□□ -0.61
RPRD1A-202ENST00000399022 TOMM6Q96B49 74 aa11.22□□□□□ -0.61
RPRD1A-202ENST00000399022 IGLC6P0CF74 106 aa11.22□□□□□ -0.61
RPRD1A-202ENST00000399022 CFAP126Q5VTH2 177 aa11.22□□□□□ -0.61
RPRD1A-202ENST00000399022 RASL10AQ92737 203 aa11.22□□□□□ -0.61
RPRD1A-202ENST00000399022 I3L3M4 83 aa11.22□□□□□ -0.61
RPRD1A-202ENST00000399022 KLK9Q9UKQ9 250 aa11.21□□□□□ -0.61
RPRD1A-202ENST00000399022 CENPVL3A0A0U1RRI6 287 aa11.21□□□□□ -0.61
RPRD1A-202ENST00000399022 TEX49A0A1B0GTD5 131 aa11.21□□□□□ -0.61
RPRD1A-202ENST00000399022 Q8N9W7 124 aa11.21□□□□□ -0.61
RPRD1A-202ENST00000399022 AGRNO00468 2067 aa11.21□□□□□ -0.61
RPRD1A-202ENST00000399022 IGHV4-61A0A0C4DH41 118 aa11.21□□□□□ -0.62
RPRD1A-202ENST00000399022 WI2-2373I1.2A0A1W2PRP0 233 aa11.21□□□□□ -0.62
RPRD1A-202ENST00000399022 LEPROTO15243 131 aa11.21□□□□□ -0.62
RPRD1A-202ENST00000399022 TMEM126AQ9H061 195 aa11.21□□□□□ -0.62
RPRD1A-202ENST00000399022 TRBV10-2A0A0K0K1G8 114 aa11.21□□□□□ -0.62
RPRD1A-202ENST00000399022 GAS8-AS1O95177 125 aa11.21□□□□□ -0.62
RPRD1A-202ENST00000399022 PIFOQ8TCI5 191 aa11.21□□□□□ -0.62
RPRD1A-202ENST00000399022 NPBQ8NG41 125 aa11.2□□□□□ -0.62
RPRD1A-202ENST00000399022 TRAV12-2A0A075B6T6 113 aa11.2□□□□□ -0.62
RPRD1A-202ENST00000399022 CHCHD5Q9BSY4 110 aa11.2□□□□□ -0.62
RPRD1A-202ENST00000399022 U3KQK5 164 aa11.2□□□□□ -0.62
RPRD1A-202ENST00000399022 ZFYVE26Q68DK2 2539 aa11.2□□□□□ -0.62
RPRD1A-202ENST00000399022 ICOSQ9Y6W8 199 aa11.2□□□□□ -0.62
RPRD1A-202ENST00000399022 SPINK13Q1W4C9 94 aa11.19□□□□□ -0.62
RPRD1A-202ENST00000399022 FANCD2OSQ96PS1 177 aa11.19□□□□□ -0.62
RPRD1A-202ENST00000399022 COL4A2P08572 1712 aa11.19□□□□□ -0.62
RPRD1A-202ENST00000399022 BLCAPP62952 87 aa11.19□□□□□ -0.62
RPRD1A-202ENST00000399022 CLEC2BQ92478 149 aa11.19□□□□□ -0.62
RPRD1A-202ENST00000399022 BUB3O43684 328 aa11.19□□□□□ -0.62
RPRD1A-202ENST00000399022 DNAH14Q0VDD8 3507 aa11.18□□□□□ -0.62
RPRD1A-202ENST00000399022 CCDC179H3BU77 68 aa11.18□□□□□ -0.62
RPRD1A-202ENST00000399022 SVIPQ8NHG7 77 aa11.18□□□□□ -0.62
RPRD1A-202ENST00000399022 NRGNQ92686 78 aa11.18□□□□□ -0.62
RPRD1A-202ENST00000399022 HHLA3Q9XRX5 114 aa11.18□□□□□ -0.62
RPRD1A-202ENST00000399022 IGHV4-38-2P0DP08 117 aa11.18□□□□□ -0.62
RPRD1A-202ENST00000399022 RNF185Q96GF1 192 aa11.18□□□□□ -0.62
RPRD1A-202ENST00000399022 TRAV4A0A0B4J268 109 aa11.18□□□□□ -0.62
RPRD1A-202ENST00000399022 BAALC-AS2P0C853 105 aa11.18□□□□□ -0.62
RPRD1A-202ENST00000399022 DEFB1P60022 68 aa11.17□□□□□ -0.62
RPRD1A-202ENST00000399022 Q71RC1 249 aaPredicted RBP11.17□□□□□ -0.62
RPRD1A-202ENST00000399022 PEMTQ9UBM1 199 aa11.17□□□□□ -0.62
RPRD1A-202ENST00000399022 IGHV3-38A0A0C4DH36 116 aa11.17□□□□□ -0.62
RPRD1A-202ENST00000399022 DSCR9P59020 149 aa11.17□□□□□ -0.62
RPRD1A-202ENST00000399022 C11orf68Q9H3H3 251 aaKnown RBP11.17□□□□□ -0.62
RPRD1A-202ENST00000399022 A0A096LNJ9 63 aa11.17□□□□□ -0.62
RPRD1A-202ENST00000399022 SPANXDQ9BXN6 97 aa11.16□□□□□ -0.62
RPRD1A-202ENST00000399022 SUMO4Q6EEV6 95 aa11.16□□□□□ -0.62
RPRD1A-202ENST00000399022 DAND5Q8N907 189 aa11.16□□□□□ -0.62
RPRD1A-202ENST00000399022 LINC01356Q8N9X3 169 aa11.16□□□□□ -0.62
RPRD1A-202ENST00000399022 A0A0J9YY99 117 aa11.15□□□□□ -0.62
RPRD1A-202ENST00000399022 NDUFA4O00483 81 aa11.15□□□□□ -0.62
RPRD1A-202ENST00000399022 DEFB131AP59861 70 aa11.15□□□□□ -0.62
RPRD1A-202ENST00000399022 RPL32P62910 135 aaKnown RBP11.15□□□□□ -0.62
RPRD1A-202ENST00000399022 OPRPNQ99935 248 aaPredicted RBP11.15□□□□□ -0.62
RPRD1A-202ENST00000399022 WDFY4Q6ZS81 3184 aa11.15□□□□□ -0.62
RPRD1A-202ENST00000399022 IGHV4-30-2A0A087WSY4 118 aa11.15□□□□□ -0.62
RPRD1A-202ENST00000399022 LINC01548A6NM66 108 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms