RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 COX7BP24311 80 aa6.39□□□□□ -1.39
SPTLC3-201ENST00000399002 EIF4EBP1Q13541 118 aaPredicted RBP6.39□□□□□ -1.39
SPTLC3-201ENST00000399002 F8W735 103 aaPredicted RBP6.39□□□□□ -1.39
SPTLC3-201ENST00000399002 B9D2Q9BPU9 175 aa6.39□□□□□ -1.39
SPTLC3-201ENST00000399002 HIGD2BQ4VC39 106 aa6.38□□□□□ -1.39
SPTLC3-201ENST00000399002 PLXND1Q9Y4D7 1925 aa6.38□□□□□ -1.39
SPTLC3-201ENST00000399002 IGKV1D-37A0A075B6S9 117 aa6.38□□□□□ -1.39
SPTLC3-201ENST00000399002 IGLC6P0CF74 106 aa6.38□□□□□ -1.39
SPTLC3-201ENST00000399002 UBE2AP49459 152 aa6.38□□□□□ -1.39
SPTLC3-201ENST00000399002 UFSP1Q6NVU6 142 aa6.38□□□□□ -1.39
SPTLC3-201ENST00000399002 MSRB1Q9NZV6 116 aa6.38□□□□□ -1.39
SPTLC3-201ENST00000399002 IGF1P05019 195 aa6.38□□□□□ -1.39
SPTLC3-201ENST00000399002 DEFB136Q30KP8 78 aa6.38□□□□□ -1.39
SPTLC3-201ENST00000399002 CDPF1Q6NVV7 123 aa6.38□□□□□ -1.39
SPTLC3-201ENST00000399002 TMEM131Q92545 1883 aa6.38□□□□□ -1.39
SPTLC3-201ENST00000399002 SPAG11BQ08648 103 aa6.38□□□□□ -1.39
SPTLC3-201ENST00000399002 SEM1Q6ZVN7 128 aa6.38□□□□□ -1.39
SPTLC3-201ENST00000399002 MAP6D1Q9H9H5 199 aa6.38□□□□□ -1.39
SPTLC3-201ENST00000399002 PRO0255Q9UI72 69 aa6.38□□□□□ -1.39
SPTLC3-201ENST00000399002 LRRK1Q38SD2 2015 aa6.38□□□□□ -1.39
SPTLC3-201ENST00000399002 FAM236AA0A1B0GUQ0 79 aa6.38□□□□□ -1.39
SPTLC3-201ENST00000399002 FAM236BA0A1B0GV22 79 aa6.38□□□□□ -1.39
SPTLC3-201ENST00000399002 GRNP28799 593 aaKnown RBP6.38□□□□□ -1.39
SPTLC3-201ENST00000399002 NUP210LQ5VU65 1888 aa6.37□□□□□ -1.39
SPTLC3-201ENST00000399002 GON4LQ3T8J9 2241 aa6.37□□□□□ -1.39
SPTLC3-201ENST00000399002 IGHV3-30P01768 117 aa6.37□□□□□ -1.39
SPTLC3-201ENST00000399002 IGHV3-33P01772 117 aa6.37□□□□□ -1.39
SPTLC3-201ENST00000399002 IGHV3-30-3P0DP02 117 aa6.37□□□□□ -1.39
SPTLC3-201ENST00000399002 IGHV3-30-5P0DP03 117 aa6.37□□□□□ -1.39
SPTLC3-201ENST00000399002 RPL39P62891 51 aaKnown RBP6.37□□□□□ -1.39
SPTLC3-201ENST00000399002 ZFP36P26651 326 aaKnown RBP6.37□□□□□ -1.39
SPTLC3-201ENST00000399002 TRBV12-3P01733 135 aa6.37□□□□□ -1.39
SPTLC3-201ENST00000399002 CRYGBP07316 175 aa6.37□□□□□ -1.39
SPTLC3-201ENST00000399002 P0DMU3 169 aa6.37□□□□□ -1.39
SPTLC3-201ENST00000399002 FAM231AP0DMU4 169 aa6.37□□□□□ -1.39
SPTLC3-201ENST00000399002 FAM231CP0DMU5 169 aa6.37□□□□□ -1.39
SPTLC3-201ENST00000399002 FANCD2OSQ96PS1 177 aa6.37□□□□□ -1.39
SPTLC3-201ENST00000399002 NEXN-AS1Q8NBZ9 246 aa6.36□□□□□ -1.39
SPTLC3-201ENST00000399002 WFDC9Q8NEX5 89 aa6.36□□□□□ -1.39
SPTLC3-201ENST00000399002 KIR2DL5BQ8NHK3 375 aa6.36□□□□□ -1.39
SPTLC3-201ENST00000399002 SS18L2Q9UHA2 77 aa6.36□□□□□ -1.39
SPTLC3-201ENST00000399002 ATP5EP56381 51 aaPredicted RBP6.36□□□□□ -1.39
SPTLC3-201ENST00000399002 BLCAPP62952 87 aa6.36□□□□□ -1.39
SPTLC3-201ENST00000399002 HIST2H2BDQ6DRA6 164 aa6.36□□□□□ -1.39
SPTLC3-201ENST00000399002 B5MCH6 92 aa6.36□□□□□ -1.39
SPTLC3-201ENST00000399002 IGLV2-8P01709 118 aa6.36□□□□□ -1.39
SPTLC3-201ENST00000399002 ZFAND2AQ8N6M9 145 aa6.36□□□□□ -1.39
SPTLC3-201ENST00000399002 TIMM17BO60830 172 aa6.36□□□□□ -1.39
SPTLC3-201ENST00000399002 PROP1O75360 226 aa6.36□□□□□ -1.39
SPTLC3-201ENST00000399002 CCDC140Q96MF4 163 aa6.36□□□□□ -1.39
SPTLC3-201ENST00000399002 TMEM223A0PJW6 202 aa6.35□□□□□ -1.39
SPTLC3-201ENST00000399002 LECT2O14960 151 aa6.35□□□□□ -1.39
SPTLC3-201ENST00000399002 EBI3Q14213 229 aa6.35□□□□□ -1.39
SPTLC3-201ENST00000399002 Q9HAA7 133 aa6.35□□□□□ -1.39
SPTLC3-201ENST00000399002 MIR7-3HGQ8N6C7 128 aa6.35□□□□□ -1.39
SPTLC3-201ENST00000399002 DENND4CQ5VZ89 1909 aa6.35□□□□□ -1.39
SPTLC3-201ENST00000399002 SPRY2O43597 315 aa6.35□□□□□ -1.39
SPTLC3-201ENST00000399002 Q6YL49 198 aa6.35□□□□□ -1.39
SPTLC3-201ENST00000399002 MLST8Q9BVC4 326 aa6.35□□□□□ -1.39
SPTLC3-201ENST00000399002 MUC7Q8TAX7 377 aa6.34□□□□□ -1.39
SPTLC3-201ENST00000399002 WFDC2Q14508 124 aa6.34□□□□□ -1.39
SPTLC3-201ENST00000399002 IGKV3D-7A0A0C4DH55 119 aa6.34□□□□□ -1.4
SPTLC3-201ENST00000399002 FAM222AQ5U5X8 452 aa6.34□□□□□ -1.4
SPTLC3-201ENST00000399002 CLEC2BQ92478 149 aa6.34□□□□□ -1.4
SPTLC3-201ENST00000399002 COL4A4P53420 1690 aaPredicted RBP6.34□□□□□ -1.4
SPTLC3-201ENST00000399002 IBA57-AS1B1ANH7 110 aa6.33□□□□□ -1.4
SPTLC3-201ENST00000399002 CITED2Q99967 270 aaPredicted RBP6.33□□□□□ -1.4
SPTLC3-201ENST00000399002 PRORYQ9H606 182 aa6.33□□□□□ -1.4
SPTLC3-201ENST00000399002 PYGO1Q9Y3Y4 419 aa6.33□□□□□ -1.4
SPTLC3-201ENST00000399002 SMAD5-AS1Q9Y6J3 95 aa6.33□□□□□ -1.4
SPTLC3-201ENST00000399002 LY6LH3BQJ8 138 aa6.33□□□□□ -1.4
SPTLC3-201ENST00000399002 RS1O15537 224 aa6.33□□□□□ -1.4
SPTLC3-201ENST00000399002 ABCA7Q8IZY2 2146 aa6.33□□□□□ -1.4
SPTLC3-201ENST00000399002 MBD6Q96DN6 1003 aa6.33□□□□□ -1.4
SPTLC3-201ENST00000399002 TP53BP1Q12888 1972 aaPredicted RBP6.33□□□□□ -1.4
SPTLC3-201ENST00000399002 TRBV30A0A0K0K1B3 111 aa6.33□□□□□ -1.4
SPTLC3-201ENST00000399002 TCL1BO95988 128 aa6.33□□□□□ -1.4
SPTLC3-201ENST00000399002 TDRG1Q3Y452 100 aa6.33□□□□□ -1.4
SPTLC3-201ENST00000399002 Q6ZUT4 128 aa6.33□□□□□ -1.4
SPTLC3-201ENST00000399002 KIF26AQ9ULI4 1882 aaPredicted RBP6.33□□□□□ -1.4
SPTLC3-201ENST00000399002 E7EUB6 86 aa6.33□□□□□ -1.4
SPTLC3-201ENST00000399002 SEC61GP60059 68 aa6.33□□□□□ -1.4
SPTLC3-201ENST00000399002 ARHGEF17Q96PE2 2063 aaPredicted RBP6.33□□□□□ -1.4
SPTLC3-201ENST00000399002 IGHV4-4A0A075B6R2 117 aa6.32□□□□□ -1.4
SPTLC3-201ENST00000399002 DNAJC9-AS1A6NH13 148 aa6.32□□□□□ -1.4
SPTLC3-201ENST00000399002 C4orf48Q5BLP8 95 aa6.32□□□□□ -1.4
SPTLC3-201ENST00000399002 IGLV10-54A0A075B6I4 117 aa6.32□□□□□ -1.4
SPTLC3-201ENST00000399002 TRBV6-5A0A0K0K1A5 114 aa6.32□□□□□ -1.4
SPTLC3-201ENST00000399002 K7EQG2 157 aa6.32□□□□□ -1.4
SPTLC3-201ENST00000399002 UPK3BQ9BT76 320 aa6.32□□□□□ -1.4
SPTLC3-201ENST00000399002 SPTBP11277 2137 aa6.32□□□□□ -1.4
SPTLC3-201ENST00000399002 UQCRQO14949 82 aa6.31□□□□□ -1.4
SPTLC3-201ENST00000399002 UNQ9165/PRO28630Q6UXU0 137 aa6.31□□□□□ -1.4
SPTLC3-201ENST00000399002 TRBV6-4A0A1B0GX49 114 aa6.31□□□□□ -1.4
SPTLC3-201ENST00000399002 PIK3CD-AS1Q5SR53 167 aa6.31□□□□□ -1.4
SPTLC3-201ENST00000399002 YPEL4Q96NS1 127 aa6.31□□□□□ -1.4
SPTLC3-201ENST00000399002 REG3AQ06141 175 aa6.3□□□□□ -1.4
SPTLC3-201ENST00000399002 MPDZO75970 2070 aa6.3□□□□□ -1.4
SPTLC3-201ENST00000399002 TP73-AS1Q9UF72 201 aa6.3□□□□□ -1.4
SPTLC3-201ENST00000399002 NDUFC1O43677 76 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms