RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 K7EMI3 77 aa10.98□□□□□ -0.65
PCDHA11-201ENST00000398640 PPDPFLQ8WWR9 84 aa10.98□□□□□ -0.65
PCDHA11-201ENST00000398640 TRACP01848 142 aa10.98□□□□□ -0.65
PCDHA11-201ENST00000398640 LRCOL1A6NCL2 159 aa10.98□□□□□ -0.65
PCDHA11-201ENST00000398640 NCR3O14931 201 aa10.98□□□□□ -0.65
PCDHA11-201ENST00000398640 DEFB1P60022 68 aa10.98□□□□□ -0.65
PCDHA11-201ENST00000398640 Q6YL49 198 aa10.98□□□□□ -0.65
PCDHA11-201ENST00000398640 TNRC6AQ8NDV7 1962 aaKnown RBP10.98□□□□□ -0.65
PCDHA11-201ENST00000398640 K7EIM0 57 aa10.98□□□□□ -0.65
PCDHA11-201ENST00000398640 PRB2P02812 416 aaPredicted RBP10.98□□□□□ -0.65
PCDHA11-201ENST00000398640 C11orf45Q8TAV5 145 aa10.98□□□□□ -0.65
PCDHA11-201ENST00000398640 A6NDX4 124 aa10.97□□□□□ -0.65
PCDHA11-201ENST00000398640 PCNX1Q96RV3 2341 aa10.97□□□□□ -0.65
PCDHA11-201ENST00000398640 IL17DQ8TAD2 202 aa10.97□□□□□ -0.65
PCDHA11-201ENST00000398640 IGLV11-55A0A075B6I3 123 aa10.97□□□□□ -0.65
PCDHA11-201ENST00000398640 ORMDL1Q9P0S3 153 aa10.97□□□□□ -0.65
PCDHA11-201ENST00000398640 CTSGP08311 255 aa10.97□□□□□ -0.65
PCDHA11-201ENST00000398640 C11orf71Q6IPW1 123 aa10.97□□□□□ -0.65
PCDHA11-201ENST00000398640 TM2D2Q9BX73 214 aa10.97□□□□□ -0.65
PCDHA11-201ENST00000398640 HIST2H2BDQ6DRA6 164 aa10.96□□□□□ -0.65
PCDHA11-201ENST00000398640 TMEM89A2RUT3 159 aa10.96□□□□□ -0.65
PCDHA11-201ENST00000398640 MSRB1Q9NZV6 116 aa10.96□□□□□ -0.65
PCDHA11-201ENST00000398640 C16orf54Q6UWD8 224 aa10.96□□□□□ -0.65
PCDHA11-201ENST00000398640 Q8N1Y9 231 aa10.96□□□□□ -0.65
PCDHA11-201ENST00000398640 FAM110AQ9BQ89 295 aa10.96□□□□□ -0.65
PCDHA11-201ENST00000398640 BAALC-AS2P0C853 105 aa10.96□□□□□ -0.66
PCDHA11-201ENST00000398640 SH2D6Q7Z4S9 175 aa10.96□□□□□ -0.66
PCDHA11-201ENST00000398640 A0A1W2PPM0 123 aa10.96□□□□□ -0.66
PCDHA11-201ENST00000398640 CRYBA4P53673 196 aa10.96□□□□□ -0.66
PCDHA11-201ENST00000398640 DYSFO75923 2080 aa10.96□□□□□ -0.66
PCDHA11-201ENST00000398640 INSL3P51460 131 aa10.95□□□□□ -0.66
PCDHA11-201ENST00000398640 IL15RAQ13261 267 aa10.95□□□□□ -0.66
PCDHA11-201ENST00000398640 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.95□□□□□ -0.66
PCDHA11-201ENST00000398640 COX7B2Q8TF08 81 aa10.95□□□□□ -0.66
PCDHA11-201ENST00000398640 MRPL36Q9P0J6 103 aaKnown RBP10.95□□□□□ -0.66
PCDHA11-201ENST00000398640 F8W1H4 67 aa10.95□□□□□ -0.66
PCDHA11-201ENST00000398640 K7EP34 96 aa10.95□□□□□ -0.66
PCDHA11-201ENST00000398640 C12orf74Q32Q52 190 aa10.95□□□□□ -0.66
PCDHA11-201ENST00000398640 KLK12Q9UKR0 248 aa10.95□□□□□ -0.66
PCDHA11-201ENST00000398640 FAM208BQ5VWN6 2430 aa10.95□□□□□ -0.66
PCDHA11-201ENST00000398640 PRAC2D3DTV9 90 aa10.95□□□□□ -0.66
PCDHA11-201ENST00000398640 DAZ2Q13117 558 aaKnown RBP10.95□□□□□ -0.66
PCDHA11-201ENST00000398640 C22orf34Q6ZV56 151 aa10.95□□□□□ -0.66
PCDHA11-201ENST00000398640 DAZ4Q86SG3 579 aaKnown RBP10.95□□□□□ -0.66
PCDHA11-201ENST00000398640 DAND5Q8N907 189 aa10.95□□□□□ -0.66
PCDHA11-201ENST00000398640 DAZ3Q9NR90 486 aaKnown RBP10.95□□□□□ -0.66
PCDHA11-201ENST00000398640 SPANXA1Q9NS26 97 aa10.95□□□□□ -0.66
PCDHA11-201ENST00000398640 PCP2Q8IVA1 136 aa10.94□□□□□ -0.66
PCDHA11-201ENST00000398640 NUP210LQ5VU65 1888 aa10.94□□□□□ -0.66
PCDHA11-201ENST00000398640 TRBV12-3P01733 135 aa10.94□□□□□ -0.66
PCDHA11-201ENST00000398640 LENEPQ9Y5L5 61 aa10.94□□□□□ -0.66
PCDHA11-201ENST00000398640 NPSP0C0P6 89 aa10.94□□□□□ -0.66
PCDHA11-201ENST00000398640 Q6ZVH6 145 aa10.93□□□□□ -0.66
PCDHA11-201ENST00000398640 NTN5Q8WTR8 489 aaPredicted RBP10.93□□□□□ -0.66
PCDHA11-201ENST00000398640 HERV-K104P63124 156 aa10.93□□□□□ -0.66
PCDHA11-201ENST00000398640 MED13Q9UHV7 2174 aa10.93□□□□□ -0.66
PCDHA11-201ENST00000398640 IGHG2P01859 326 aa10.93□□□□□ -0.66
PCDHA11-201ENST00000398640 ZFP2Q6ZN57 461 aa10.93□□□□□ -0.66
PCDHA11-201ENST00000398640 RNF152Q8N8N0 203 aa10.93□□□□□ -0.66
PCDHA11-201ENST00000398640 NCKAP5O14513 1909 aa10.93□□□□□ -0.66
PCDHA11-201ENST00000398640 GTSF1Q8WW33 167 aa10.93□□□□□ -0.66
PCDHA11-201ENST00000398640 NOTCH3Q9UM47 2321 aa10.93□□□□□ -0.66
PCDHA11-201ENST00000398640 CFC1BP0CG36 223 aa10.92□□□□□ -0.66
PCDHA11-201ENST00000398640 CFC1P0CG37 223 aa10.92□□□□□ -0.66
PCDHA11-201ENST00000398640 CDPF1Q6NVV7 123 aa10.92□□□□□ -0.66
PCDHA11-201ENST00000398640 SPTAN1Q13813 2472 aaKnown RBP10.92□□□□□ -0.66
PCDHA11-201ENST00000398640 A0A0J9YXV3 536 aa10.92□□□□□ -0.66
PCDHA11-201ENST00000398640 Q6ZSR3 168 aa10.92□□□□□ -0.66
PCDHA11-201ENST00000398640 MBD6Q96DN6 1003 aa10.92□□□□□ -0.66
PCDHA11-201ENST00000398640 IGKV2-24A0A0C4DH68 120 aa10.92□□□□□ -0.66
PCDHA11-201ENST00000398640 RPL39P62891 51 aaKnown RBP10.92□□□□□ -0.66
PCDHA11-201ENST00000398640 ANKRD29Q8N6D5 301 aa10.92□□□□□ -0.66
PCDHA11-201ENST00000398640 ZNF747Q9BV97 191 aa10.92□□□□□ -0.66
PCDHA11-201ENST00000398640 SND1-IT1Q9HBX3 110 aa10.92□□□□□ -0.66
PCDHA11-201ENST00000398640 PCDH15Q96QU1 1955 aa10.92□□□□□ -0.66
PCDHA11-201ENST00000398640 IGKV1-17P01599 117 aa10.92□□□□□ -0.66
PCDHA11-201ENST00000398640 IFITM1P13164 125 aa10.92□□□□□ -0.66
PCDHA11-201ENST00000398640 VSIG2Q96IQ7 327 aa10.92□□□□□ -0.66
PCDHA11-201ENST00000398640 K7EP13 123 aa10.91□□□□□ -0.66
PCDHA11-201ENST00000398640 C9orf47Q6ZRZ4 202 aa10.91□□□□□ -0.66
PCDHA11-201ENST00000398640 FUSP35637 526 aaKnown RBP eCLIP10.91□□□□□ -0.66
PCDHA11-201ENST00000398640 PATE2Q6UY27 113 aa10.91□□□□□ -0.66
PCDHA11-201ENST00000398640 CUL9Q8IWT3 2517 aa10.91□□□□□ -0.66
PCDHA11-201ENST00000398640 EML6Q6ZMW3 1958 aa10.91□□□□□ -0.66
PCDHA11-201ENST00000398640 LINC00173Q6ZV60 143 aa10.9□□□□□ -0.66
PCDHA11-201ENST00000398640 TRBV7-3A0A075B6L6 115 aa10.9□□□□□ -0.67
PCDHA11-201ENST00000398640 NDUFA1O15239 70 aa10.89□□□□□ -0.67
PCDHA11-201ENST00000398640 IGLV1-47P01700 117 aa10.89□□□□□ -0.67
PCDHA11-201ENST00000398640 MUSTN1Q8IVN3 82 aa10.89□□□□□ -0.67
PCDHA11-201ENST00000398640 TMEM61Q8N0U2 210 aa10.89□□□□□ -0.67
PCDHA11-201ENST00000398640 CDSNQ15517 529 aa10.89□□□□□ -0.67
PCDHA11-201ENST00000398640 LYPD6BQ8NI32 183 aa10.89□□□□□ -0.67
PCDHA11-201ENST00000398640 CHKB-CPT1BH3BT56 60 aa10.88□□□□□ -0.67
PCDHA11-201ENST00000398640 HILS1P60008 231 aa10.88□□□□□ -0.67
PCDHA11-201ENST00000398640 BBC3Q96PG8 261 aaPredicted RBP10.88□□□□□ -0.67
PCDHA11-201ENST00000398640 SIVA1O15304 175 aa10.88□□□□□ -0.67
PCDHA11-201ENST00000398640 FSTL3O95633 263 aa10.88□□□□□ -0.67
PCDHA11-201ENST00000398640 UNQ9165/PRO28630Q6UXU0 137 aa10.88□□□□□ -0.67
PCDHA11-201ENST00000398640 TEX22C9J3V5 150 aa10.88□□□□□ -0.67
PCDHA11-201ENST00000398640 E7EUB6 86 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms