RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 TNFRSF6BO95407 300 aa10.93□□□□□ -0.66
CAPN3-207ENST00000397200 RNASE3P12724 160 aaKnown RBP10.93□□□□□ -0.66
CAPN3-207ENST00000397200 MAP1LC3CQ9BXW4 147 aa10.93□□□□□ -0.66
CAPN3-207ENST00000397200 LOC389332A0A1B0GUA5 103 aa10.92□□□□□ -0.66
CAPN3-207ENST00000397200 C7orf71A4D174 169 aa10.92□□□□□ -0.66
CAPN3-207ENST00000397200 GAS8-AS1O95177 125 aa10.92□□□□□ -0.66
CAPN3-207ENST00000397200 IGKV3-20P01619 116 aa10.92□□□□□ -0.66
CAPN3-207ENST00000397200 SPATA45Q537H7 98 aa10.92□□□□□ -0.66
CAPN3-207ENST00000397200 MRPL52Q86TS9 123 aaKnown RBP10.92□□□□□ -0.66
CAPN3-207ENST00000397200 NRACQ8N912 160 aa10.92□□□□□ -0.66
CAPN3-207ENST00000397200 NXT2Q9NPJ8 142 aaKnown RBP10.92□□□□□ -0.66
CAPN3-207ENST00000397200 IGLV2-18A0A075B6J9 118 aa10.91□□□□□ -0.66
CAPN3-207ENST00000397200 TRAV9-2A0A087WT02 112 aa10.91□□□□□ -0.66
CAPN3-207ENST00000397200 LINC01545Q5VT33 79 aa10.91□□□□□ -0.66
CAPN3-207ENST00000397200 MRAP2Q96G30 205 aa10.91□□□□□ -0.66
CAPN3-207ENST00000397200 NOTCH1P46531 2555 aa10.91□□□□□ -0.66
CAPN3-207ENST00000397200 HBDP02042 147 aa10.91□□□□□ -0.66
CAPN3-207ENST00000397200 LBHQ53QV2 105 aaPredicted RBP10.91□□□□□ -0.66
CAPN3-207ENST00000397200 AMTNQ6UX39 209 aa10.91□□□□□ -0.66
CAPN3-207ENST00000397200 TRPT1Q86TN4 253 aaKnown RBP10.91□□□□□ -0.66
CAPN3-207ENST00000397200 POM121L12Q8N7R1 296 aa10.91□□□□□ -0.66
CAPN3-207ENST00000397200 DNAH3Q8TD57 4116 aa10.9□□□□□ -0.66
CAPN3-207ENST00000397200 PRB2P02812 416 aaPredicted RBP10.9□□□□□ -0.66
CAPN3-207ENST00000397200 IGLC3P0DOY3 106 aa10.9□□□□□ -0.66
CAPN3-207ENST00000397200 IGHV4-30-4P0DP06 118 aa10.9□□□□□ -0.66
CAPN3-207ENST00000397200 S100A4P26447 101 aaKnown RBP10.9□□□□□ -0.66
CAPN3-207ENST00000397200 NBEAL1Q6ZS30 2694 aa10.9□□□□□ -0.66
CAPN3-207ENST00000397200 MUC4Q99102 2169 aa10.9□□□□□ -0.67
CAPN3-207ENST00000397200 GNRH2O43555 120 aa10.89□□□□□ -0.67
CAPN3-207ENST00000397200 GATA1P15976 413 aaPredicted RBP10.89□□□□□ -0.67
CAPN3-207ENST00000397200 RPL35AP18077 110 aaKnown RBP10.89□□□□□ -0.67
CAPN3-207ENST00000397200 TSPOP30536 169 aa10.89□□□□□ -0.67
CAPN3-207ENST00000397200 Q8N8P6 123 aa10.89□□□□□ -0.67
CAPN3-207ENST00000397200 CLUHP3Q96NS8 147 aa10.89□□□□□ -0.67
CAPN3-207ENST00000397200 DPH3P1Q9H4G8 78 aa10.89□□□□□ -0.67
CAPN3-207ENST00000397200 PHLDA3Q9Y5J5 127 aa10.89□□□□□ -0.67
CAPN3-207ENST00000397200 M0R381 172 aa10.88□□□□□ -0.67
CAPN3-207ENST00000397200 CDKN1BP46527 198 aa10.88□□□□□ -0.67
CAPN3-207ENST00000397200 FAM159AQ6UWV7 190 aa10.88□□□□□ -0.67
CAPN3-207ENST00000397200 ATOH7Q8N100 152 aa10.88□□□□□ -0.67
CAPN3-207ENST00000397200 C2orf88Q9BSF0 95 aa10.88□□□□□ -0.67
CAPN3-207ENST00000397200 TRAV12-3A0A0B4J271 114 aa10.87□□□□□ -0.67
CAPN3-207ENST00000397200 RBMY1BA6NDE4 496 aaKnown RBP10.87□□□□□ -0.67
CAPN3-207ENST00000397200 RBMY1EA6NEQ0 496 aaKnown RBP10.87□□□□□ -0.67
CAPN3-207ENST00000397200 RBMY1DP0C7P1 496 aaKnown RBP10.87□□□□□ -0.67
CAPN3-207ENST00000397200 NUTF2P61970 127 aaKnown RBP10.87□□□□□ -0.67
CAPN3-207ENST00000397200 MAJINQ3KP22 176 aa10.87□□□□□ -0.67
CAPN3-207ENST00000397200 ZNF705AQ6ZN79 300 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-207ENST00000397200 C9orf85Q96MD7 179 aa10.87□□□□□ -0.67
CAPN3-207ENST00000397200 AP1S3Q96PC3 154 aa10.87□□□□□ -0.67
CAPN3-207ENST00000397200 UQCR10Q9UDW1 63 aa10.87□□□□□ -0.67
CAPN3-207ENST00000397200 A8MZ25 164 aa10.87□□□□□ -0.67
CAPN3-207ENST00000397200 KIF25-AS1Q9Y6Z4 181 aa10.87□□□□□ -0.67
CAPN3-207ENST00000397200 K7EIL1 84 aa10.86□□□□□ -0.67
CAPN3-207ENST00000397200 FCER1GP30273 86 aa10.86□□□□□ -0.67
CAPN3-207ENST00000397200 FXYD7P58549 80 aa10.86□□□□□ -0.67
CAPN3-207ENST00000397200 SPINK13Q1W4C9 94 aa10.86□□□□□ -0.67
CAPN3-207ENST00000397200 LGALS9BQ3B8N2 356 aa10.86□□□□□ -0.67
CAPN3-207ENST00000397200 LGALS9CQ6DKI2 356 aa10.86□□□□□ -0.67
CAPN3-207ENST00000397200 MORN3Q6PF18 240 aaPredicted RBP10.86□□□□□ -0.67
CAPN3-207ENST00000397200 TIMM8BQ9Y5J9 83 aaPredicted RBP10.86□□□□□ -0.67
CAPN3-207ENST00000397200 IGHV3-16A0A0C4DH30 117 aa10.85□□□□□ -0.67
CAPN3-207ENST00000397200 EREGO14944 169 aa10.85□□□□□ -0.67
CAPN3-207ENST00000397200 SNHG12Q9BXW3 62 aa10.85□□□□□ -0.67
CAPN3-207ENST00000397200 ST20Q9HBF5 79 aa10.85□□□□□ -0.67
CAPN3-207ENST00000397200 IGHV1OR15-1A0A075B7D0 117 aa10.84□□□□□ -0.67
CAPN3-207ENST00000397200 TRAV26-2A0A0B4J265 109 aa10.84□□□□□ -0.67
CAPN3-207ENST00000397200 APOC4P55056 127 aa10.84□□□□□ -0.67
CAPN3-207ENST00000397200 LINC00315P59091 139 aa10.84□□□□□ -0.67
CAPN3-207ENST00000397200 C20orf78Q9BR46 151 aa10.84□□□□□ -0.67
CAPN3-207ENST00000397200 CSTL1Q9H114 145 aa10.84□□□□□ -0.67
CAPN3-207ENST00000397200 SPRY2O43597 315 aa10.84□□□□□ -0.67
CAPN3-207ENST00000397200 C14orf178Q8N769 122 aaPredicted RBP10.84□□□□□ -0.67
CAPN3-207ENST00000397200 RASL10AQ92737 203 aa10.84□□□□□ -0.67
CAPN3-207ENST00000397200 IFI27L1Q96BM0 104 aa10.84□□□□□ -0.67
CAPN3-207ENST00000397200 SMIM2Q9BVW6 85 aa10.84□□□□□ -0.67
CAPN3-207ENST00000397200 TRAV12-2A0A075B6T6 113 aa10.83□□□□□ -0.68
CAPN3-207ENST00000397200 M0R143 59 aa10.83□□□□□ -0.68
CAPN3-207ENST00000397200 DEFB121Q5J5C9 76 aa10.83□□□□□ -0.68
CAPN3-207ENST00000397200 KIR2DL5BQ8NHK3 375 aa10.83□□□□□ -0.68
CAPN3-207ENST00000397200 C1QTNF4Q9BXJ3 329 aa10.83□□□□□ -0.68
CAPN3-207ENST00000397200 XCL2Q9UBD3 114 aa10.83□□□□□ -0.68
CAPN3-207ENST00000397200 K7EMI3 77 aa10.82□□□□□ -0.68
CAPN3-207ENST00000397200 PPP1R17O96001 155 aa10.82□□□□□ -0.68
CAPN3-207ENST00000397200 RPL32P62910 135 aaKnown RBP10.82□□□□□ -0.68
CAPN3-207ENST00000397200 INSP01308 110 aa10.81□□□□□ -0.68
CAPN3-207ENST00000397200 SUMO2P61956 95 aaKnown RBP10.81□□□□□ -0.68
CAPN3-207ENST00000397200 TRGV11A0A075B6L2 103 aa10.8□□□□□ -0.68
CAPN3-207ENST00000397200 hDV102S1A0JD36 115 aa10.8□□□□□ -0.68
CAPN3-207ENST00000397200 GIG44P09565 113 aaPredicted RBP10.8□□□□□ -0.68
CAPN3-207ENST00000397200 RBMY1A1P0DJD3 496 aaKnown RBP10.8□□□□□ -0.68
CAPN3-207ENST00000397200 RBMY1CP0DJD4 496 aa10.8□□□□□ -0.68
CAPN3-207ENST00000397200 LAGE3Q14657 143 aa10.8□□□□□ -0.68
CAPN3-207ENST00000397200 RBMY1FQ15415 496 aaKnown RBP10.8□□□□□ -0.68
CAPN3-207ENST00000397200 MRAPQ8TCY5 172 aa10.8□□□□□ -0.68
CAPN3-207ENST00000397200 MDFICQ9P1T7 246 aa10.8□□□□□ -0.68
CAPN3-207ENST00000397200 MRPS16Q9Y3D3 137 aaKnown RBP10.8□□□□□ -0.68
CAPN3-207ENST00000397200 HSBP1L1C9JCN9 74 aa10.79□□□□□ -0.68
CAPN3-207ENST00000397200 H0Y8G0 127 aa10.79□□□□□ -0.68
CAPN3-207ENST00000397200 MGPP08493 103 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms