RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 KIAA1644Q3SXP7 199 aa9.79□□□□□ -0.84
MCF2L-209ENST00000397036 OR10J3Q5JRS4 329 aa9.79□□□□□ -0.84
MCF2L-209ENST00000397036 LAMTOR2Q9Y2Q5 125 aa9.79□□□□□ -0.84
MCF2L-209ENST00000397036 ORMDL3Q8N138 153 aa9.78□□□□□ -0.84
MCF2L-209ENST00000397036 MRAP2Q96G30 205 aa9.78□□□□□ -0.84
MCF2L-209ENST00000397036 CIDEAO60543 219 aa9.77□□□□□ -0.84
MCF2L-209ENST00000397036 SMIM17P0DL12 118 aa9.77□□□□□ -0.84
MCF2L-209ENST00000397036 MIFP14174 115 aa9.77□□□□□ -0.84
MCF2L-209ENST00000397036 SRIP30626 198 aa9.77□□□□□ -0.84
MCF2L-209ENST00000397036 C14orf178Q8N769 122 aaPredicted RBP9.77□□□□□ -0.84
MCF2L-209ENST00000397036 RS1O15537 224 aa9.77□□□□□ -0.85
MCF2L-209ENST00000397036 PPP1R17O96001 155 aa9.77□□□□□ -0.85
MCF2L-209ENST00000397036 CKS2P33552 79 aa9.77□□□□□ -0.85
MCF2L-209ENST00000397036 DEFB135Q30KP9 77 aa9.77□□□□□ -0.85
MCF2L-209ENST00000397036 UFSP1Q6NVU6 142 aa9.77□□□□□ -0.85
MCF2L-209ENST00000397036 OR11H2Q8NH07 326 aa9.77□□□□□ -0.85
MCF2L-209ENST00000397036 EDA2RQ9HAV5 297 aa9.77□□□□□ -0.85
MCF2L-209ENST00000397036 RHODO00212 210 aa9.76□□□□□ -0.85
MCF2L-209ENST00000397036 S100A6P06703 90 aa9.76□□□□□ -0.85
MCF2L-209ENST00000397036 ZFP2Q6ZN57 461 aa9.76□□□□□ -0.85
MCF2L-209ENST00000397036 C18orf15Q96N68 181 aa9.76□□□□□ -0.85
MCF2L-209ENST00000397036 JPT2Q9H910 190 aa9.76□□□□□ -0.85
MCF2L-209ENST00000397036 C5orf52A6NGY3 159 aa9.75□□□□□ -0.85
MCF2L-209ENST00000397036 PRSS47A8MTI9 375 aa9.75□□□□□ -0.85
MCF2L-209ENST00000397036 D6R8Y8 96 aa9.75□□□□□ -0.85
MCF2L-209ENST00000397036 K7EIL1 84 aa9.75□□□□□ -0.85
MCF2L-209ENST00000397036 CFAP126Q5VTH2 177 aa9.75□□□□□ -0.85
MCF2L-209ENST00000397036 LINC00612Q8N6U2 182 aa9.75□□□□□ -0.85
MCF2L-209ENST00000397036 C18orf32Q8TCD1 76 aa9.75□□□□□ -0.85
MCF2L-209ENST00000397036 PRELID3AQ96N28 172 aa9.75□□□□□ -0.85
MCF2L-209ENST00000397036 NOP10Q9NPE3 64 aaKnown RBP9.75□□□□□ -0.85
MCF2L-209ENST00000397036 LYRM9A8MSI8 78 aa9.74□□□□□ -0.85
MCF2L-209ENST00000397036 NDUFA6P56556 154 aa9.74□□□□□ -0.85
MCF2L-209ENST00000397036 SAMD10Q9BYL1 202 aa9.74□□□□□ -0.85
MCF2L-209ENST00000397036 TRGV1A0A0A0MS02 117 aa9.73□□□□□ -0.85
MCF2L-209ENST00000397036 TRAV4A0A0B4J268 109 aa9.73□□□□□ -0.85
MCF2L-209ENST00000397036 ESDP10768 282 aa9.73□□□□□ -0.85
MCF2L-209ENST00000397036 HOXA5P20719 270 aa9.73□□□□□ -0.85
MCF2L-209ENST00000397036 Q8NAQ8 132 aa9.73□□□□□ -0.85
MCF2L-209ENST00000397036 MRPL16Q9NX20 251 aaKnown RBP9.73□□□□□ -0.85
MCF2L-209ENST00000397036 NBEAL2Q6ZNJ1 2754 aa9.73□□□□□ -0.85
MCF2L-209ENST00000397036 A0A087WWL8 130 aa9.72□□□□□ -0.85
MCF2L-209ENST00000397036 Q6ZTI0 123 aa9.72□□□□□ -0.85
MCF2L-209ENST00000397036 NRACQ8N912 160 aa9.72□□□□□ -0.85
MCF2L-209ENST00000397036 C20orf78Q9BR46 151 aa9.72□□□□□ -0.85
MCF2L-209ENST00000397036 IGHV4-28A0A0C4DH34 117 aa9.72□□□□□ -0.85
MCF2L-209ENST00000397036 TNFRSF6BO95407 300 aa9.72□□□□□ -0.85
MCF2L-209ENST00000397036 BAGE3Q86Y29 109 aa9.72□□□□□ -0.85
MCF2L-209ENST00000397036 TRBV6-5A0A0K0K1A5 114 aa9.71□□□□□ -0.86
MCF2L-209ENST00000397036 H7C1H1 209 aa9.71□□□□□ -0.86
MCF2L-209ENST00000397036 M0QY20 66 aa9.71□□□□□ -0.86
MCF2L-209ENST00000397036 NPYP01303 97 aa9.71□□□□□ -0.86
MCF2L-209ENST00000397036 IGHV3-53P01767 116 aa9.71□□□□□ -0.86
MCF2L-209ENST00000397036 MGPP08493 103 aa9.71□□□□□ -0.86
MCF2L-209ENST00000397036 SNRPEP62304 92 aaKnown RBP9.71□□□□□ -0.86
MCF2L-209ENST00000397036 RPL32P62910 135 aaKnown RBP9.71□□□□□ -0.86
MCF2L-209ENST00000397036 OR4C5Q8NGB2 326 aa9.71□□□□□ -0.86
MCF2L-209ENST00000397036 TEX48A0A1B0GUV7 120 aa9.7□□□□□ -0.86
MCF2L-209ENST00000397036 F5H697 171 aa9.7□□□□□ -0.86
MCF2L-209ENST00000397036 SMKR1H3BMG3 65 aa9.7□□□□□ -0.86
MCF2L-209ENST00000397036 FAM74A4Q5TZK3 123 aa9.7□□□□□ -0.86
MCF2L-209ENST00000397036 SUMO4Q6EEV6 95 aa9.7□□□□□ -0.86
MCF2L-209ENST00000397036 CHCHD1Q96BP2 118 aaKnown RBP9.7□□□□□ -0.86
MCF2L-209ENST00000397036 MAP1LC3AQ9H492 121 aa9.7□□□□□ -0.86
MCF2L-209ENST00000397036 TRAV26-2A0A0B4J265 109 aa9.69□□□□□ -0.86
MCF2L-209ENST00000397036 LINC01546A6NGU7 62 aa9.69□□□□□ -0.86
MCF2L-209ENST00000397036 GAS8-AS1O95177 125 aa9.69□□□□□ -0.86
MCF2L-209ENST00000397036 NCR2O95944 276 aa9.69□□□□□ -0.86
MCF2L-209ENST00000397036 LINC00310P59036 64 aa9.69□□□□□ -0.86
MCF2L-209ENST00000397036 ZNF56Q15929 161 aa9.69□□□□□ -0.86
MCF2L-209ENST00000397036 NIT1Q86X76 327 aa9.69□□□□□ -0.86
MCF2L-209ENST00000397036 PACRGQ96M98 296 aaPredicted RBP9.69□□□□□ -0.86
MCF2L-209ENST00000397036 TM2D3Q9BRN9 247 aa9.69□□□□□ -0.86
MCF2L-209ENST00000397036 NXT2Q9NPJ8 142 aaKnown RBP9.69□□□□□ -0.86
MCF2L-209ENST00000397036 DKK2Q9UBU2 259 aa9.69□□□□□ -0.86
MCF2L-209ENST00000397036 TRGV2A0A075B6R0 118 aa9.68□□□□□ -0.86
MCF2L-209ENST00000397036 GAGE12BA1L429 117 aa9.68□□□□□ -0.86
MCF2L-209ENST00000397036 GAGE7O76087 117 aa9.68□□□□□ -0.86
MCF2L-209ENST00000397036 LINC00614P0C842 121 aa9.68□□□□□ -0.86
MCF2L-209ENST00000397036 GAGE12FP0CL80 117 aa9.68□□□□□ -0.86
MCF2L-209ENST00000397036 GAGE12GP0CL81 117 aa9.68□□□□□ -0.86
MCF2L-209ENST00000397036 GAGE12IP0CL82 117 aa9.68□□□□□ -0.86
MCF2L-209ENST00000397036 GATA1P15976 413 aaPredicted RBP9.68□□□□□ -0.86
MCF2L-209ENST00000397036 IQCJQ1A5X6 159 aa9.68□□□□□ -0.86
MCF2L-209ENST00000397036 SBSPONQ8IVN8 264 aa9.68□□□□□ -0.86
MCF2L-209ENST00000397036 SPATA25Q9BR10 227 aa9.68□□□□□ -0.86
MCF2L-209ENST00000397036 C11orf68Q9H3H3 251 aaKnown RBP9.68□□□□□ -0.86
MCF2L-209ENST00000397036 NIT2Q9NQR4 276 aa9.68□□□□□ -0.86
MCF2L-209ENST00000397036 K7EMI3 77 aa9.67□□□□□ -0.86
MCF2L-209ENST00000397036 SERF1AO75920 110 aa9.67□□□□□ -0.86
MCF2L-209ENST00000397036 PRB2P02812 416 aaPredicted RBP9.67□□□□□ -0.86
MCF2L-209ENST00000397036 SPART-AS1P0CW21 52 aa9.67□□□□□ -0.86
MCF2L-209ENST00000397036 EMP1P54849 157 aa9.67□□□□□ -0.86
MCF2L-209ENST00000397036 SUMO2P61956 95 aaKnown RBP9.67□□□□□ -0.86
MCF2L-209ENST00000397036 FAM222AQ5U5X8 452 aa9.67□□□□□ -0.86
MCF2L-209ENST00000397036 HIST3H2BBQ8N257 126 aa9.67□□□□□ -0.86
MCF2L-209ENST00000397036 PRSS3P2Q8NHM4 247 aa9.67□□□□□ -0.86
MCF2L-209ENST00000397036 URB1-AS1Q96HZ7 61 aa9.67□□□□□ -0.86
MCF2L-209ENST00000397036 ZNF479Q96JC4 524 aa9.67□□□□□ -0.86
MCF2L-209ENST00000397036 IGLV2-18A0A075B6J9 118 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms