RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 NEGR1Q7Z3B1 354 aa12.25□□□□□ -0.45
TNFSF13-204ENST00000396542 LINC01551Q86U37 167 aa12.25□□□□□ -0.45
TNFSF13-204ENST00000396542 RPP21Q9H633 154 aaKnown RBP12.25□□□□□ -0.45
TNFSF13-204ENST00000396542 DNAH2Q9P225 4427 aa12.25□□□□□ -0.45
TNFSF13-204ENST00000396542 FAM74A3Q4VXF1 159 aa12.24□□□□□ -0.45
TNFSF13-204ENST00000396542 SPANXN1Q5VSR9 72 aa12.24□□□□□ -0.45
TNFSF13-204ENST00000396542 LYPD5Q6UWN5 251 aa12.24□□□□□ -0.45
TNFSF13-204ENST00000396542 FER1L6-AS1Q8NA97 138 aa12.24□□□□□ -0.45
TNFSF13-204ENST00000396542 PRADC1Q9BSG0 188 aa12.24□□□□□ -0.45
TNFSF13-204ENST00000396542 IGLV2-18A0A075B6J9 118 aa12.23□□□□□ -0.45
TNFSF13-204ENST00000396542 A0A087WWL8 130 aa12.23□□□□□ -0.45
TNFSF13-204ENST00000396542 MUC21A0A0G2JKD1 596 aa12.23□□□□□ -0.45
TNFSF13-204ENST00000396542 MUC21A0A140T8X8 626 aa12.23□□□□□ -0.45
TNFSF13-204ENST00000396542 RAB14P61106 215 aa12.23□□□□□ -0.45
TNFSF13-204ENST00000396542 FAM74A4Q5TZK3 123 aa12.23□□□□□ -0.45
TNFSF13-204ENST00000396542 SH2D6Q7Z4S9 175 aa12.23□□□□□ -0.45
TNFSF13-204ENST00000396542 A0A1W2PPQ1 181 aa12.22□□□□□ -0.45
TNFSF13-204ENST00000396542 F2Z2F3 143 aa12.22□□□□□ -0.45
TNFSF13-204ENST00000396542 ATP6V1G1O75348 118 aa12.22□□□□□ -0.45
TNFSF13-204ENST00000396542 LINC00694P0DN24 101 aa12.21□□□□□ -0.45
TNFSF13-204ENST00000396542 CTRLP40313 264 aa12.21□□□□□ -0.45
TNFSF13-204ENST00000396542 CACNG7P62955 275 aa12.21□□□□□ -0.45
TNFSF13-204ENST00000396542 C14orf178Q8N769 122 aaPredicted RBP12.21□□□□□ -0.45
TNFSF13-204ENST00000396542 TPPP3Q9BW30 176 aa12.21□□□□□ -0.45
TNFSF13-204ENST00000396542 Q9H8V8 135 aa12.21□□□□□ -0.45
TNFSF13-204ENST00000396542 NBDYA0A0U1RRE5 68 aa12.2□□□□□ -0.46
TNFSF13-204ENST00000396542 LINC00862A6NCI5 91 aa12.2□□□□□ -0.46
TNFSF13-204ENST00000396542 M0R2N4 97 aa12.2□□□□□ -0.46
TNFSF13-204ENST00000396542 TIRAPP58753 221 aa12.2□□□□□ -0.46
TNFSF13-204ENST00000396542 ERVFC1-1P60608 527 aa12.2□□□□□ -0.46
TNFSF13-204ENST00000396542 CT83Q5H943 113 aa12.2□□□□□ -0.46
TNFSF13-204ENST00000396542 LYZL1Q6UWQ5 148 aa12.2□□□□□ -0.46
TNFSF13-204ENST00000396542 CNFNQ9BYD5 112 aa12.2□□□□□ -0.46
TNFSF13-204ENST00000396542 KIF25-AS1Q9Y6Z4 181 aa12.2□□□□□ -0.46
TNFSF13-204ENST00000396542 GATCO43716 136 aaKnown RBP12.19□□□□□ -0.46
TNFSF13-204ENST00000396542 TMEM241Q24JQ0 296 aa12.19□□□□□ -0.46
TNFSF13-204ENST00000396542 WDR73Q6P4I2 378 aa12.19□□□□□ -0.46
TNFSF13-204ENST00000396542 SLC7A5P1Q8MH63 180 aa12.19□□□□□ -0.46
TNFSF13-204ENST00000396542 GTSF1Q8WW33 167 aa12.19□□□□□ -0.46
TNFSF13-204ENST00000396542 AP1S3Q96PC3 154 aa12.19□□□□□ -0.46
TNFSF13-204ENST00000396542 Q9UF83 564 aa12.19□□□□□ -0.46
TNFSF13-204ENST00000396542 RAB4BP61018 213 aa12.18□□□□□ -0.46
TNFSF13-204ENST00000396542 SSTP61278 116 aa12.18□□□□□ -0.46
TNFSF13-204ENST00000396542 RPL23P62829 140 aaKnown RBP12.18□□□□□ -0.46
TNFSF13-204ENST00000396542 OSTCQ9NRP0 149 aa12.18□□□□□ -0.46
TNFSF13-204ENST00000396542 MSRB1Q9NZV6 116 aa12.18□□□□□ -0.46
TNFSF13-204ENST00000396542 NAT8Q9UHE5 227 aa12.18□□□□□ -0.46
TNFSF13-204ENST00000396542 EPPK1P58107 5090 aaKnown RBP12.18□□□□□ -0.46
TNFSF13-204ENST00000396542 FRAS1Q86XX4 4008 aa12.18□□□□□ -0.46
TNFSF13-204ENST00000396542 A8MWL6 223 aa12.17□□□□□ -0.46
TNFSF13-204ENST00000396542 LINC00315P59091 139 aa12.17□□□□□ -0.46
TNFSF13-204ENST00000396542 ISOC2Q96AB3 205 aa12.17□□□□□ -0.46
TNFSF13-204ENST00000396542 TRBV10-1A0A0K0K1A3 114 aa12.16□□□□□ -0.46
TNFSF13-204ENST00000396542 NTF3P20783 257 aa12.16□□□□□ -0.46
TNFSF13-204ENST00000396542 FOXA3P55318 350 aaPredicted RBP12.16□□□□□ -0.46
TNFSF13-204ENST00000396542 SOHLH1Q5JUK2 328 aa12.16□□□□□ -0.46
TNFSF13-204ENST00000396542 ATP6V0E2Q8NHE4 81 aa12.16□□□□□ -0.46
TNFSF13-204ENST00000396542 DNAH17Q9UFH2 4485 aa12.16□□□□□ -0.46
TNFSF13-204ENST00000396542 GAGE12JA6NER3 117 aa12.15□□□□□ -0.46
TNFSF13-204ENST00000396542 SIVA1O15304 175 aa12.15□□□□□ -0.46
TNFSF13-204ENST00000396542 SMIM17P0DL12 118 aa12.15□□□□□ -0.46
TNFSF13-204ENST00000396542 GAGE1Q13065 139 aa12.15□□□□□ -0.46
TNFSF13-204ENST00000396542 GAGE4Q13068 117 aa12.15□□□□□ -0.46
TNFSF13-204ENST00000396542 GAGE5Q13069 117 aa12.15□□□□□ -0.46
TNFSF13-204ENST00000396542 ZNF56Q15929 161 aa12.15□□□□□ -0.46
TNFSF13-204ENST00000396542 GAGE13Q4V321 117 aa12.15□□□□□ -0.46
TNFSF13-204ENST00000396542 TTC32Q5I0X7 151 aa12.15□□□□□ -0.46
TNFSF13-204ENST00000396542 KRTAP1-5Q9BYS1 174 aa12.15□□□□□ -0.46
TNFSF13-204ENST00000396542 TRGC1P0CF51 173 aa12.14□□□□□ -0.47
TNFSF13-204ENST00000396542 OR10G8Q8NGN5 311 aa12.14□□□□□ -0.47
TNFSF13-204ENST00000396542 TSKUQ8WUA8 353 aa12.14□□□□□ -0.47
TNFSF13-204ENST00000396542 GFRA4Q9GZZ7 299 aa12.14□□□□□ -0.47
TNFSF13-204ENST00000396542 GTSF1LQ9H1H1 148 aa12.14□□□□□ -0.47
TNFSF13-204ENST00000396542 V9GYV3 84 aa12.14□□□□□ -0.47
TNFSF13-204ENST00000396542 FAT2Q9NYQ8 4349 aa12.14□□□□□ -0.47
TNFSF13-204ENST00000396542 FAM231BA6NCW3 169 aa12.13□□□□□ -0.47
TNFSF13-204ENST00000396542 RTL8CO15255 209 aa12.13□□□□□ -0.47
TNFSF13-204ENST00000396542 EVI2AP22794 236 aa12.13□□□□□ -0.47
TNFSF13-204ENST00000396542 ADIRFQ15847 76 aa12.13□□□□□ -0.47
TNFSF13-204ENST00000396542 COMMD7Q86VX2 200 aa12.13□□□□□ -0.47
TNFSF13-204ENST00000396542 WFDC10BQ8IUB3 73 aa12.13□□□□□ -0.47
TNFSF13-204ENST00000396542 C15orf54Q8N8G6 183 aa12.13□□□□□ -0.47
TNFSF13-204ENST00000396542 TWIST1Q15672 202 aa12.12□□□□□ -0.47
TNFSF13-204ENST00000396542 LELP1Q5T871 98 aa12.12□□□□□ -0.47
TNFSF13-204ENST00000396542 TRBV7-3A0A075B6L6 115 aa12.11□□□□□ -0.47
TNFSF13-204ENST00000396542 F5H697 171 aa12.11□□□□□ -0.47
TNFSF13-204ENST00000396542 DNAH10OSP0CZ25 163 aa12.11□□□□□ -0.47
TNFSF13-204ENST00000396542 UBE2D3P61077 147 aa12.11□□□□□ -0.47
TNFSF13-204ENST00000396542 UBE2D2P62837 147 aa12.11□□□□□ -0.47
TNFSF13-204ENST00000396542 RPL36AP83881 106 aaKnown RBP12.11□□□□□ -0.47
TNFSF13-204ENST00000396542 C1orf134Q5TEV5 83 aa12.11□□□□□ -0.47
TNFSF13-204ENST00000396542 NEXN-AS1Q8NBZ9 246 aa12.11□□□□□ -0.47
TNFSF13-204ENST00000396542 RPL36ALQ969Q0 106 aaKnown RBP12.11□□□□□ -0.47
TNFSF13-204ENST00000396542 PGLYRP4Q96LB8 373 aa12.11□□□□□ -0.47
TNFSF13-204ENST00000396542 DPH3P1Q9H4G8 78 aa12.11□□□□□ -0.47
TNFSF13-204ENST00000396542 HIGD1CA8MV81 97 aa12.1□□□□□ -0.47
TNFSF13-204ENST00000396542 S100A1P23297 94 aa12.1□□□□□ -0.47
TNFSF13-204ENST00000396542 LINC00336Q6ZUF6 198 aa12.1□□□□□ -0.47
TNFSF13-204ENST00000396542 K7EP13 123 aa12.09□□□□□ -0.47
TNFSF13-204ENST00000396542 M0QY20 66 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms