RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 IGHV1-69DA0A0B4J2H0 117 aa11.76□□□□□ -0.53
PTBP1-204ENST00000394601 GAGE12JA6NER3 117 aa11.76□□□□□ -0.53
PTBP1-204ENST00000394601 GAGE7O76087 117 aa11.76□□□□□ -0.53
PTBP1-204ENST00000394601 IGHV1-69P01742 117 aa11.76□□□□□ -0.53
PTBP1-204ENST00000394601 GAGE12FP0CL80 117 aa11.76□□□□□ -0.53
PTBP1-204ENST00000394601 GAGE12GP0CL81 117 aa11.76□□□□□ -0.53
PTBP1-204ENST00000394601 GAGE12IP0CL82 117 aa11.76□□□□□ -0.53
PTBP1-204ENST00000394601 DEFB1P60022 68 aa11.76□□□□□ -0.53
PTBP1-204ENST00000394601 GAGE4Q13068 117 aa11.76□□□□□ -0.53
PTBP1-204ENST00000394601 PRR9Q5T870 116 aa11.76□□□□□ -0.53
PTBP1-204ENST00000394601 BRD3OSQ6XYD6 125 aa11.76□□□□□ -0.53
PTBP1-204ENST00000394601 MOB4Q9Y3A3 225 aa11.76□□□□□ -0.53
PTBP1-204ENST00000394601 TRAV41A0A0B4J266 112 aa11.75□□□□□ -0.53
PTBP1-204ENST00000394601 S100A4P26447 101 aaKnown RBP11.75□□□□□ -0.53
PTBP1-204ENST00000394601 UNQ9165/PRO28630Q6UXU0 137 aa11.75□□□□□ -0.53
PTBP1-204ENST00000394601 ZNF469Q96JG9 3925 aaPredicted RBP11.75□□□□□ -0.53
PTBP1-204ENST00000394601 IGLV2-18A0A075B6J9 118 aa11.75□□□□□ -0.53
PTBP1-204ENST00000394601 TRBV7-3A0A075B6L6 115 aa11.75□□□□□ -0.53
PTBP1-204ENST00000394601 A6NJY4 79 aa11.75□□□□□ -0.53
PTBP1-204ENST00000394601 RPL39LQ96EH5 51 aaKnown RBP11.75□□□□□ -0.53
PTBP1-204ENST00000394601 A0A087WX48 190 aa11.75□□□□□ -0.53
PTBP1-204ENST00000394601 SOCS3O14543 225 aa11.75□□□□□ -0.53
PTBP1-204ENST00000394601 IGF1P05019 195 aa11.75□□□□□ -0.53
PTBP1-204ENST00000394601 IGHV4-38-2P0DP08 117 aa11.75□□□□□ -0.53
PTBP1-204ENST00000394601 PIEZO1Q92508 2521 aa11.74□□□□□ -0.53
PTBP1-204ENST00000394601 CACNA1AO00555 2505 aa11.74□□□□□ -0.53
PTBP1-204ENST00000394601 TRAV2A0A0B4J234 112 aa11.74□□□□□ -0.53
PTBP1-204ENST00000394601 USP9XQ93008 2570 aaPredicted RBP11.74□□□□□ -0.53
PTBP1-204ENST00000394601 PRSS2P07478 247 aa11.74□□□□□ -0.53
PTBP1-204ENST00000394601 Q6ZS46 218 aa11.74□□□□□ -0.53
PTBP1-204ENST00000394601 C14orf178Q8N769 122 aaPredicted RBP11.74□□□□□ -0.53
PTBP1-204ENST00000394601 METTL26Q96S19 204 aa11.74□□□□□ -0.53
PTBP1-204ENST00000394601 FAM223BA6NKX1 122 aa11.73□□□□□ -0.53
PTBP1-204ENST00000394601 BRI3O95415 125 aa11.73□□□□□ -0.53
PTBP1-204ENST00000394601 FAM223AQ8IWN6 122 aa11.73□□□□□ -0.53
PTBP1-204ENST00000394601 C10orf105Q8TEF2 133 aa11.73□□□□□ -0.53
PTBP1-204ENST00000394601 F8VRH5 84 aa11.73□□□□□ -0.53
PTBP1-204ENST00000394601 H7C1H1 209 aa11.73□□□□□ -0.53
PTBP1-204ENST00000394601 SLC25A20O43772 301 aa11.73□□□□□ -0.53
PTBP1-204ENST00000394601 TEX49A0A1B0GTD5 131 aa11.73□□□□□ -0.53
PTBP1-204ENST00000394601 ADARB2-AS1A8MUL3 147 aa11.73□□□□□ -0.53
PTBP1-204ENST00000394601 MRPL23Q16540 153 aaKnown RBP11.73□□□□□ -0.53
PTBP1-204ENST00000394601 MEIG1Q5JSS6 88 aa11.73□□□□□ -0.53
PTBP1-204ENST00000394601 Q8N8P6 123 aa11.73□□□□□ -0.53
PTBP1-204ENST00000394601 ZANQ9Y493 2812 aa11.72□□□□□ -0.53
PTBP1-204ENST00000394601 ID1P41134 155 aa11.72□□□□□ -0.53
PTBP1-204ENST00000394601 CITED1Q99966 193 aa11.72□□□□□ -0.53
PTBP1-204ENST00000394601 IGHV4-4A0A075B6R2 117 aa11.72□□□□□ -0.53
PTBP1-204ENST00000394601 NDUFV3P56181 108 aaKnown RBP11.72□□□□□ -0.53
PTBP1-204ENST00000394601 SRSF1Q07955 248 aaKnown RBP eCLIP11.72□□□□□ -0.532e-10■■■□□ 18.2
PTBP1-204ENST00000394601 PLNP26678 52 aa11.71□□□□□ -0.53
PTBP1-204ENST00000394601 NRACQ8N912 160 aa11.71□□□□□ -0.53
PTBP1-204ENST00000394601 IGHG2P01859 326 aa11.71□□□□□ -0.54
PTBP1-204ENST00000394601 RPL11P62913 178 aaKnown RBP11.71□□□□□ -0.54
PTBP1-204ENST00000394601 FAM19A4Q96LR4 140 aa11.71□□□□□ -0.54
PTBP1-204ENST00000394601 A6NDX4 124 aa11.7□□□□□ -0.54
PTBP1-204ENST00000394601 F5H697 171 aa11.7□□□□□ -0.54
PTBP1-204ENST00000394601 NHLRC4P0CG21 123 aaPredicted RBP11.7□□□□□ -0.54
PTBP1-204ENST00000394601 IFITM1P13164 125 aa11.7□□□□□ -0.54
PTBP1-204ENST00000394601 C15orf53Q8NAA6 179 aa11.7□□□□□ -0.54
PTBP1-204ENST00000394601 CHCHD5Q9BSY4 110 aa11.7□□□□□ -0.54
PTBP1-204ENST00000394601 ZMAT4Q9H898 229 aa11.7□□□□□ -0.54
PTBP1-204ENST00000394601 NBPF19A0A087WUL8 3843 aa11.7□□□□□ -0.54
PTBP1-204ENST00000394601 C2orf66Q6UXQ4 117 aa11.69□□□□□ -0.54
PTBP1-204ENST00000394601 MXRA5Q9NR99 2828 aa11.69□□□□□ -0.54
PTBP1-204ENST00000394601 DOPEY1Q5JWR5 2465 aa11.69□□□□□ -0.54
PTBP1-204ENST00000394601 IGHV4-30-2A0A087WSY4 118 aa11.69□□□□□ -0.54
PTBP1-204ENST00000394601 CFHR3Q02985 330 aa11.69□□□□□ -0.54
PTBP1-204ENST00000394601 ZFAND2AQ8N6M9 145 aa11.69□□□□□ -0.54
PTBP1-204ENST00000394601 AVPP01185 164 aa11.69□□□□□ -0.54
PTBP1-204ENST00000394601 ZNF56Q15929 161 aa11.68□□□□□ -0.54
PTBP1-204ENST00000394601 DUSP14O95147 198 aaKnown RBP11.68□□□□□ -0.54
PTBP1-204ENST00000394601 BLCAPP62952 87 aa11.68□□□□□ -0.54
PTBP1-204ENST00000394601 NDUFA11Q86Y39 141 aa11.68□□□□□ -0.54
PTBP1-204ENST00000394601 PIMREGQ9BSJ6 248 aa11.68□□□□□ -0.54
PTBP1-204ENST00000394601 NDUFA4O00483 81 aa11.67□□□□□ -0.54
PTBP1-204ENST00000394601 IGLV1-40P01703 118 aa11.67□□□□□ -0.54
PTBP1-204ENST00000394601 HERVK_113P61574 105 aa11.67□□□□□ -0.54
PTBP1-204ENST00000394601 RPL39P62891 51 aaKnown RBP11.67□□□□□ -0.54
PTBP1-204ENST00000394601 TAL2Q16559 108 aa11.67□□□□□ -0.54
PTBP1-204ENST00000394601 RS1O15537 224 aa11.66□□□□□ -0.54
PTBP1-204ENST00000394601 FAM74A4Q5TZK3 123 aa11.66□□□□□ -0.54
PTBP1-204ENST00000394601 C9orf139Q6ZV77 190 aa11.66□□□□□ -0.54
PTBP1-204ENST00000394601 APRG1Q8IVJ8 170 aa11.66□□□□□ -0.54
PTBP1-204ENST00000394601 DUX3Q96PT4 197 aa11.66□□□□□ -0.54
PTBP1-204ENST00000394601 CCL19Q99731 98 aa11.66□□□□□ -0.54
PTBP1-204ENST00000394601 TRAV12-3A0A0B4J271 114 aa11.66□□□□□ -0.54
PTBP1-204ENST00000394601 LY6EQ16553 131 aa11.66□□□□□ -0.54
PTBP1-204ENST00000394601 C16orf92Q96LL3 132 aa11.66□□□□□ -0.54
PTBP1-204ENST00000394601 OPRPNQ99935 248 aaPredicted RBP11.66□□□□□ -0.54
PTBP1-204ENST00000394601 LENEPQ9Y5L5 61 aa11.66□□□□□ -0.54
PTBP1-204ENST00000394601 TRAV8-4A0A0B4J246 113 aa11.65□□□□□ -0.54
PTBP1-204ENST00000394601 A4D1N5 150 aa11.65□□□□□ -0.54
PTBP1-204ENST00000394601 H3BUA1 57 aa11.65□□□□□ -0.54
PTBP1-204ENST00000394601 CFC1BP0CG36 223 aa11.65□□□□□ -0.54
PTBP1-204ENST00000394601 CFC1P0CG37 223 aa11.65□□□□□ -0.54
PTBP1-204ENST00000394601 LYRM7Q5U5X0 104 aa11.65□□□□□ -0.54
PTBP1-204ENST00000394601 RASL10AQ92737 203 aa11.65□□□□□ -0.54
PTBP1-204ENST00000394601 PPDPFQ9H3Y8 114 aa11.65□□□□□ -0.54
PTBP1-204ENST00000394601 ZNF256Q9Y2P7 627 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms