RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 TM2D2Q9BX73 214 aa12.67□□□□□ -0.38
SIPA1-201ENST00000394224 TRPT1Q86TN4 253 aaKnown RBP12.67□□□□□ -0.38
SIPA1-201ENST00000394224 TEX15Q9BXT5 2789 aa12.67□□□□□ -0.38
SIPA1-201ENST00000394224 NPFFO15130 113 aa12.67□□□□□ -0.38
SIPA1-201ENST00000394224 IGHV4-38-2P0DP08 117 aa12.67□□□□□ -0.38
SIPA1-201ENST00000394224 DPH3P1Q9H4G8 78 aa12.67□□□□□ -0.38
SIPA1-201ENST00000394224 SPINK8P0C7L1 97 aa12.66□□□□□ -0.38
SIPA1-201ENST00000394224 PSMG4Q5JS54 123 aa12.66□□□□□ -0.38
SIPA1-201ENST00000394224 MORN3Q6PF18 240 aaPredicted RBP12.66□□□□□ -0.38
SIPA1-201ENST00000394224 ZMAT4Q9H898 229 aa12.66□□□□□ -0.38
SIPA1-201ENST00000394224 ANKRD17O75179 2603 aaKnown RBP12.66□□□□□ -0.38
SIPA1-201ENST00000394224 NFE4Q86UQ8 179 aa12.66□□□□□ -0.38
SIPA1-201ENST00000394224 TRAV21A0A0B4J279 112 aa12.66□□□□□ -0.38
SIPA1-201ENST00000394224 CENPVL3A0A0U1RRI6 287 aa12.66□□□□□ -0.38
SIPA1-201ENST00000394224 P0DMU3 169 aa12.66□□□□□ -0.38
SIPA1-201ENST00000394224 FAM231AP0DMU4 169 aa12.66□□□□□ -0.38
SIPA1-201ENST00000394224 FAM231CP0DMU5 169 aa12.66□□□□□ -0.38
SIPA1-201ENST00000394224 SPINK13Q1W4C9 94 aa12.66□□□□□ -0.38
SIPA1-201ENST00000394224 A8MZ25 164 aa12.65□□□□□ -0.38
SIPA1-201ENST00000394224 SPXQ9BT56 116 aa12.65□□□□□ -0.38
SIPA1-201ENST00000394224 MDFICQ9P1T7 246 aa12.65□□□□□ -0.38
SIPA1-201ENST00000394224 F8W1H4 67 aa12.65□□□□□ -0.38
SIPA1-201ENST00000394224 SMPXQ9UHP9 88 aa12.65□□□□□ -0.38
SIPA1-201ENST00000394224 ZFAND2AQ8N6M9 145 aa12.64□□□□□ -0.39
SIPA1-201ENST00000394224 SDHAF1A6NFY7 115 aa12.64□□□□□ -0.39
SIPA1-201ENST00000394224 CIDEAO60543 219 aa12.64□□□□□ -0.39
SIPA1-201ENST00000394224 TSPEAR-AS2P59090 65 aa12.64□□□□□ -0.39
SIPA1-201ENST00000394224 ORMDL2Q53FV1 153 aa12.64□□□□□ -0.39
SIPA1-201ENST00000394224 DUX3Q96PT4 197 aa12.64□□□□□ -0.39
SIPA1-201ENST00000394224 HIGD1BQ9P298 99 aa12.64□□□□□ -0.39
SIPA1-201ENST00000394224 TRAV26-1A0A087WT03 109 aa12.63□□□□□ -0.39
SIPA1-201ENST00000394224 TSPAN13O95857 204 aa12.63□□□□□ -0.39
SIPA1-201ENST00000394224 CRIP2P52943 208 aaPredicted RBP12.63□□□□□ -0.39
SIPA1-201ENST00000394224 Q6ZSV7 163 aa12.63□□□□□ -0.39
SIPA1-201ENST00000394224 Q8N6K4 173 aa12.63□□□□□ -0.39
SIPA1-201ENST00000394224 TRBV7-3A0A075B6L6 115 aa12.62□□□□□ -0.39
SIPA1-201ENST00000394224 C9JAW5 83 aa12.62□□□□□ -0.39
SIPA1-201ENST00000394224 KHDC1LQ5JSQ8 128 aa12.62□□□□□ -0.39
SIPA1-201ENST00000394224 DAND5Q8N907 189 aa12.62□□□□□ -0.39
SIPA1-201ENST00000394224 SIRPDQ9H106 197 aa12.62□□□□□ -0.39
SIPA1-201ENST00000394224 HIVEP2P31629 2446 aa12.62□□□□□ -0.39
SIPA1-201ENST00000394224 K7ENP7 123 aa12.62□□□□□ -0.39
SIPA1-201ENST00000394224 NEXN-AS1Q8NBZ9 246 aa12.62□□□□□ -0.39
SIPA1-201ENST00000394224 ZNF625Q96I27 306 aaPredicted RBP12.62□□□□□ -0.39
SIPA1-201ENST00000394224 ZNF462Q96JM2 2506 aa12.62□□□□□ -0.39
SIPA1-201ENST00000394224 PROK1P58294 105 aa12.62□□□□□ -0.39
SIPA1-201ENST00000394224 DLX4Q92988 240 aaPredicted RBP12.62□□□□□ -0.39
SIPA1-201ENST00000394224 TCL1BO95988 128 aa12.61□□□□□ -0.39
SIPA1-201ENST00000394224 LGALS3P17931 250 aaKnown RBP12.61□□□□□ -0.39
SIPA1-201ENST00000394224 CNFNQ9BYD5 112 aa12.61□□□□□ -0.39
SIPA1-201ENST00000394224 RNASE3P12724 160 aaKnown RBP12.61□□□□□ -0.39
SIPA1-201ENST00000394224 UBE2E1P51965 193 aa12.61□□□□□ -0.39
SIPA1-201ENST00000394224 C5orf56Q8N8D9 126 aa12.61□□□□□ -0.39
SIPA1-201ENST00000394224 IGHV3-38A0A0C4DH36 116 aa12.61□□□□□ -0.39
SIPA1-201ENST00000394224 SMCPP49901 116 aaPredicted RBP12.61□□□□□ -0.39
SIPA1-201ENST00000394224 SUMO4Q6EEV6 95 aa12.61□□□□□ -0.39
SIPA1-201ENST00000394224 GPHB5Q86YW7 130 aa12.61□□□□□ -0.39
SIPA1-201ENST00000394224 IGHV3OR16-12A0A075B7B8 117 aa12.6□□□□□ -0.39
SIPA1-201ENST00000394224 C19orf84I3L1E1 186 aa12.6□□□□□ -0.39
SIPA1-201ENST00000394224 ATP6V0BQ99437 205 aa12.6□□□□□ -0.39
SIPA1-201ENST00000394224 TRBV20-1A0A075B6N2 111 aa12.6□□□□□ -0.39
SIPA1-201ENST00000394224 TOMM6Q96B49 74 aa12.6□□□□□ -0.39
SIPA1-201ENST00000394224 Q9UF83 564 aa12.6□□□□□ -0.39
SIPA1-201ENST00000394224 FOXI1Q12951 378 aa12.59□□□□□ -0.39
SIPA1-201ENST00000394224 FHL3Q13643 280 aa12.59□□□□□ -0.39
SIPA1-201ENST00000394224 A0A0J9YXV3 536 aa12.59□□□□□ -0.39
SIPA1-201ENST00000394224 MINOS1Q5TGZ0 78 aa12.59□□□□□ -0.39
SIPA1-201ENST00000394224 C9orf47Q6ZRZ4 202 aa12.59□□□□□ -0.39
SIPA1-201ENST00000394224 GEMIN7Q9H840 131 aaKnown RBP12.59□□□□□ -0.39
SIPA1-201ENST00000394224 MINOS1-NBL1R4GNA1 71 aa12.59□□□□□ -0.39
SIPA1-201ENST00000394224 TRAV8-3A0A0A6YYJ7 113 aa12.58□□□□□ -0.39
SIPA1-201ENST00000394224 TRBV7-1A0A0A6YYK4 115 aa12.58□□□□□ -0.39
SIPA1-201ENST00000394224 IGHV3-16A0A0C4DH30 117 aa12.58□□□□□ -0.39
SIPA1-201ENST00000394224 A0A1B0GV72 72 aa12.58□□□□□ -0.39
SIPA1-201ENST00000394224 RBAKDNA6NC62 111 aa12.58□□□□□ -0.39
SIPA1-201ENST00000394224 GATA3P23771 443 aa12.58□□□□□ -0.39
SIPA1-201ENST00000394224 C3orf56Q8N813 242 aa12.58□□□□□ -0.39
SIPA1-201ENST00000394224 ZNRF2Q8NHG8 242 aa12.58□□□□□ -0.39
SIPA1-201ENST00000394224 AJUBAQ96IF1 538 aa12.58□□□□□ -0.39
SIPA1-201ENST00000394224 A4D1N5 150 aa12.58□□□□□ -0.4
SIPA1-201ENST00000394224 TSHBP01222 138 aa12.58□□□□□ -0.4
SIPA1-201ENST00000394224 CRYGDP07320 174 aa12.58□□□□□ -0.4
SIPA1-201ENST00000394224 XGP55808 180 aa12.58□□□□□ -0.4
SIPA1-201ENST00000394224 C11orf44Q8N8P7 122 aa12.58□□□□□ -0.4
SIPA1-201ENST00000394224 ZNF876PQ49A33 203 aa12.57□□□□□ -0.4
SIPA1-201ENST00000394224 TMEM238LA0A1B0GVL6 79 aa12.57□□□□□ -0.4
SIPA1-201ENST00000394224 A6NJY4 79 aa12.57□□□□□ -0.4
SIPA1-201ENST00000394224 HERVK_113P61574 105 aa12.57□□□□□ -0.4
SIPA1-201ENST00000394224 C9orf139Q6ZV77 190 aa12.57□□□□□ -0.4
SIPA1-201ENST00000394224 MRAP2Q96G30 205 aa12.57□□□□□ -0.4
SIPA1-201ENST00000394224 IGHV4-61A0A0C4DH41 118 aa12.57□□□□□ -0.4
SIPA1-201ENST00000394224 DEFB136Q30KP8 78 aa12.56□□□□□ -0.4
SIPA1-201ENST00000394224 SYNJ2BPP57105 145 aa12.55□□□□□ -0.4
SIPA1-201ENST00000394224 LMO4P61968 165 aa12.55□□□□□ -0.4
SIPA1-201ENST00000394224 ZNF48Q96MX3 618 aaPredicted RBP12.55□□□□□ -0.4
SIPA1-201ENST00000394224 CFC1BP0CG36 223 aa12.55□□□□□ -0.4
SIPA1-201ENST00000394224 CFC1P0CG37 223 aa12.55□□□□□ -0.4
SIPA1-201ENST00000394224 ANKRD29Q8N6D5 301 aa12.55□□□□□ -0.4
SIPA1-201ENST00000394224 MOB4Q9Y3A3 225 aa12.55□□□□□ -0.4
SIPA1-201ENST00000394224 J3QQQ9 107 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms