RNA–Protein interactions for RNA: ENST00000394157.7

PSEN1-203, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 1,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-203ENST00000394157 TWIST1Q15672 202 aa13.65□□□□□ -0.22
PSEN1-203ENST00000394157 FAM210BQ96KR6 192 aa13.65□□□□□ -0.22
PSEN1-203ENST00000394157 RPS10P5Q9NQ39 176 aa13.65□□□□□ -0.22
PSEN1-203ENST00000394157 NUPR2A6NF83 97 aa13.64□□□□□ -0.23
PSEN1-203ENST00000394157 SMIM17P0DL12 118 aa13.64□□□□□ -0.23
PSEN1-203ENST00000394157 KCNIP4Q6PIL6 250 aa13.64□□□□□ -0.23
PSEN1-203ENST00000394157 SMIM15Q7Z3B0 74 aa13.64□□□□□ -0.23
PSEN1-203ENST00000394157 ZNF479Q96JC4 524 aa13.64□□□□□ -0.23
PSEN1-203ENST00000394157 TRAV9-1A0A075B6T8 112 aa13.63□□□□□ -0.23
PSEN1-203ENST00000394157 TRGV4A0A0C4DH28 118 aa13.63□□□□□ -0.23
PSEN1-203ENST00000394157 F5H768 121 aa13.63□□□□□ -0.23
PSEN1-203ENST00000394157 HTN3P15516 51 aa13.63□□□□□ -0.23
PSEN1-203ENST00000394157 ATP5L2Q7Z4Y8 100 aa13.63□□□□□ -0.23
PSEN1-203ENST00000394157 MSRB1Q9NZV6 116 aa13.63□□□□□ -0.23
PSEN1-203ENST00000394157 IGHV3-53P01767 116 aa13.62□□□□□ -0.23
PSEN1-203ENST00000394157 S100A8P05109 93 aa13.62□□□□□ -0.23
PSEN1-203ENST00000394157 CRYGDP07320 174 aa13.62□□□□□ -0.23
PSEN1-203ENST00000394157 S100PP25815 95 aa13.62□□□□□ -0.23
PSEN1-203ENST00000394157 SSTP61278 116 aa13.62□□□□□ -0.23
PSEN1-203ENST00000394157 FHL2Q14192 279 aa13.62□□□□□ -0.23
PSEN1-203ENST00000394157 UFSP1Q6NVU6 142 aa13.62□□□□□ -0.23
PSEN1-203ENST00000394157 CEMP1Q6PRD7 247 aaPredicted RBP13.62□□□□□ -0.23
PSEN1-203ENST00000394157 JPT2Q9H910 190 aa13.62□□□□□ -0.23
PSEN1-203ENST00000394157 PRO0255Q9UI72 69 aa13.62□□□□□ -0.23
PSEN1-203ENST00000394157 C3orf84H3BNL1 204 aa13.61□□□□□ -0.23
PSEN1-203ENST00000394157 HOXA5P20719 270 aa13.61□□□□□ -0.23
PSEN1-203ENST00000394157 C14orf178Q8N769 122 aaPredicted RBP13.61□□□□□ -0.23
PSEN1-203ENST00000394157 BTF3L4Q96K17 158 aa13.61□□□□□ -0.23
PSEN1-203ENST00000394157 SAMD10Q9BYL1 202 aa13.61□□□□□ -0.23
PSEN1-203ENST00000394157 KLK5Q9Y337 293 aaPredicted RBP13.61□□□□□ -0.23
PSEN1-203ENST00000394157 H3BNG1 76 aa13.6□□□□□ -0.23
PSEN1-203ENST00000394157 GATA1P15976 413 aaPredicted RBP13.6□□□□□ -0.23
PSEN1-203ENST00000394157 FAM3BP58499 235 aaPredicted RBP13.6□□□□□ -0.23
PSEN1-203ENST00000394157 FAM74A4Q5TZK3 123 aa13.6□□□□□ -0.23
PSEN1-203ENST00000394157 DPH3P1Q9H4G8 78 aa13.6□□□□□ -0.23
PSEN1-203ENST00000394157 HHLA3Q9XRX5 114 aa13.6□□□□□ -0.23
PSEN1-203ENST00000394157 KIF25-AS1Q9Y6Z4 181 aa13.6□□□□□ -0.23
PSEN1-203ENST00000394157 A0A087WWL8 130 aa13.59□□□□□ -0.23
PSEN1-203ENST00000394157 TRBV6-4A0A1B0GX49 114 aa13.59□□□□□ -0.23
PSEN1-203ENST00000394157 EVI2AP22794 236 aa13.59□□□□□ -0.23
PSEN1-203ENST00000394157 TMEM191AQ9H0A3 160 aa13.59□□□□□ -0.23
PSEN1-203ENST00000394157 NACAE9PAV3 2078 aa13.59□□□□□ -0.23
PSEN1-203ENST00000394157 TCTAP57738 103 aa13.58□□□□□ -0.24
PSEN1-203ENST00000394157 RAB4BP61018 213 aa13.58□□□□□ -0.24
PSEN1-203ENST00000394157 HBBP68871 147 aa13.58□□□□□ -0.24
PSEN1-203ENST00000394157 LCE2AQ5TA79 106 aaPredicted RBP13.58□□□□□ -0.24
PSEN1-203ENST00000394157 DNAH7Q8WXX0 4024 aa13.58□□□□□ -0.24
PSEN1-203ENST00000394157 IGHV3-73A0A0B4J1V6 119 aa13.57□□□□□ -0.24
PSEN1-203ENST00000394157 A0A1B0GXF2 115 aa13.57□□□□□ -0.24
PSEN1-203ENST00000394157 CRYBA4P53673 196 aa13.57□□□□□ -0.24
PSEN1-203ENST00000394157 RASL11AQ6T310 242 aa13.57□□□□□ -0.24
PSEN1-203ENST00000394157 FRZBQ92765 325 aa13.57□□□□□ -0.24
PSEN1-203ENST00000394157 TRAV26-1A0A087WT03 109 aa13.56□□□□□ -0.24
PSEN1-203ENST00000394157 PAX4O43316 350 aa13.56□□□□□ -0.24
PSEN1-203ENST00000394157 LINC00315P59091 139 aa13.56□□□□□ -0.24
PSEN1-203ENST00000394157 RHOHQ15669 191 aa13.56□□□□□ -0.24
PSEN1-203ENST00000394157 MRPL54Q6P161 138 aaKnown RBP13.56□□□□□ -0.24
PSEN1-203ENST00000394157 C15orf53Q8NAA6 179 aa13.56□□□□□ -0.24
PSEN1-203ENST00000394157 F5H697 171 aa13.55□□□□□ -0.24
PSEN1-203ENST00000394157 ZNF56Q15929 161 aa13.55□□□□□ -0.24
PSEN1-203ENST00000394157 TMEM88Q6PEY1 159 aa13.55□□□□□ -0.24
PSEN1-203ENST00000394157 SLC25A29Q8N8R3 303 aa13.55□□□□□ -0.24
PSEN1-203ENST00000394157 GATD1Q8NB37 220 aa13.55□□□□□ -0.24
PSEN1-203ENST00000394157 PRADC1Q9BSG0 188 aa13.55□□□□□ -0.24
PSEN1-203ENST00000394157 IGLL5B9A064 214 aa13.54□□□□□ -0.24
PSEN1-203ENST00000394157 H7C1H1 209 aa13.54□□□□□ -0.24
PSEN1-203ENST00000394157 S100A1P23297 94 aa13.54□□□□□ -0.24
PSEN1-203ENST00000394157 CAMPP49913 170 aa13.54□□□□□ -0.24
PSEN1-203ENST00000394157 ZFAND6Q6FIF0 208 aa13.54□□□□□ -0.24
PSEN1-203ENST00000394157 ATRAIDQ6UW56 229 aa13.54□□□□□ -0.24
PSEN1-203ENST00000394157 VSIG2Q96IQ7 327 aa13.54□□□□□ -0.24
PSEN1-203ENST00000394157 TRBV10-1A0A0K0K1A3 114 aa13.53□□□□□ -0.24
PSEN1-203ENST00000394157 K7EQD1 137 aa13.53□□□□□ -0.24
PSEN1-203ENST00000394157 MGPP08493 103 aa13.53□□□□□ -0.24
PSEN1-203ENST00000394157 Q6ZSN1 163 aa13.53□□□□□ -0.24
PSEN1-203ENST00000394157 URGCP-MRPS24S4R325 110 aa13.53□□□□□ -0.24
PSEN1-203ENST00000394157 A0A0J9YY99 117 aa13.52□□□□□ -0.25
PSEN1-203ENST00000394157 COX19Q49B96 90 aa13.52□□□□□ -0.25
PSEN1-203ENST00000394157 CASC10Q5T4H9 136 aa13.52□□□□□ -0.25
PSEN1-203ENST00000394157 SMCO4Q9NRQ5 59 aa13.52□□□□□ -0.25
PSEN1-203ENST00000394157 FAM104BQ5XKR9 115 aa13.51□□□□□ -0.25
PSEN1-203ENST00000394157 SH2D6Q7Z4S9 175 aa13.51□□□□□ -0.25
PSEN1-203ENST00000394157 ICOSQ9Y6W8 199 aa13.51□□□□□ -0.25
PSEN1-203ENST00000394157 TRBV24-1A0A075B6N3 115 aa13.5□□□□□ -0.25
PSEN1-203ENST00000394157 ATP6V1G1O75348 118 aa13.5□□□□□ -0.25
PSEN1-203ENST00000394157 GYPEP15421 78 aa13.5□□□□□ -0.25
PSEN1-203ENST00000394157 MRPL23Q16540 153 aaKnown RBP13.5□□□□□ -0.25
PSEN1-203ENST00000394157 SUMO4Q6EEV6 95 aa13.5□□□□□ -0.25
PSEN1-203ENST00000394157 MRAP2Q96G30 205 aa13.5□□□□□ -0.25
PSEN1-203ENST00000394157 M0QY20 66 aa13.49□□□□□ -0.25
PSEN1-203ENST00000394157 RAB4AP20338 218 aa13.49□□□□□ -0.25
PSEN1-203ENST00000394157 ELOBQ15370 118 aa13.49□□□□□ -0.25
PSEN1-203ENST00000394157 AMN1Q8IY45 258 aa13.48□□□□□ -0.25
PSEN1-203ENST00000394157 RNF185Q96GF1 192 aa13.48□□□□□ -0.25
PSEN1-203ENST00000394157 DNAJC30Q96LL9 226 aa13.48□□□□□ -0.25
PSEN1-203ENST00000394157 APLNQ9ULZ1 77 aa13.48□□□□□ -0.25
PSEN1-203ENST00000394157 CSMD3Q7Z407 3707 aa13.47□□□□□ -0.25
PSEN1-203ENST00000394157 NUDT3O95989 172 aa13.47□□□□□ -0.25
PSEN1-203ENST00000394157 SRIP30626 198 aa13.47□□□□□ -0.25
PSEN1-203ENST00000394157 RPL36AP83881 106 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms