RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 MORN3Q6PF18 240 aaPredicted RBP13.84□□□□□ -0.19
TRAF3-203ENST00000392745 A0A1B0GWB2 263 aa13.83□□□□□ -0.2
TRAF3-203ENST00000392745 ZNF580Q9UK33 172 aa13.83□□□□□ -0.2
TRAF3-203ENST00000392745 FLNAP21333 2647 aaKnown RBP13.83□□□□□ -0.2
TRAF3-203ENST00000392745 TRAV12-1A0A0B4J245 112 aa13.83□□□□□ -0.2
TRAF3-203ENST00000392745 PRR9Q5T870 116 aa13.83□□□□□ -0.2
TRAF3-203ENST00000392745 IGHV4-4A0A075B6R2 117 aa13.82□□□□□ -0.2
TRAF3-203ENST00000392745 C8orf86Q6ZUL3 223 aa13.82□□□□□ -0.2
TRAF3-203ENST00000392745 SCGB3A1Q96QR1 104 aa13.82□□□□□ -0.2
TRAF3-203ENST00000392745 J3KRW8 73 aa13.82□□□□□ -0.2
TRAF3-203ENST00000392745 LGALS1P09382 135 aaKnown RBP13.82□□□□□ -0.2
TRAF3-203ENST00000392745 PSMB8P28062 276 aa13.82□□□□□ -0.2
TRAF3-203ENST00000392745 SONP18583 2426 aaKnown RBP13.81□□□□□ -0.2
TRAF3-203ENST00000392745 AKAP9Q99996 3911 aa13.81□□□□□ -0.2
TRAF3-203ENST00000392745 NDUFA4O00483 81 aa13.81□□□□□ -0.2
TRAF3-203ENST00000392745 NEXN-AS1Q8NBZ9 246 aa13.81□□□□□ -0.2
TRAF3-203ENST00000392745 DUX5Q96PT3 197 aa13.81□□□□□ -0.2
TRAF3-203ENST00000392745 PGPEP1Q9NXJ5 209 aa13.81□□□□□ -0.2
TRAF3-203ENST00000392745 TOMM6Q96B49 74 aa13.8□□□□□ -0.2
TRAF3-203ENST00000392745 RPL39LQ96EH5 51 aaKnown RBP13.8□□□□□ -0.2
TRAF3-203ENST00000392745 C20orf78Q9BR46 151 aa13.8□□□□□ -0.2
TRAF3-203ENST00000392745 C9orf47Q6ZRZ4 202 aa13.8□□□□□ -0.2
TRAF3-203ENST00000392745 RASL10AQ92737 203 aa13.8□□□□□ -0.2
TRAF3-203ENST00000392745 MRAP2Q96G30 205 aa13.8□□□□□ -0.2
TRAF3-203ENST00000392745 GCN1Q92616 2671 aaKnown RBP13.79□□□□□ -0.2
TRAF3-203ENST00000392745 LINC01619G3V211 115 aa13.79□□□□□ -0.2
TRAF3-203ENST00000392745 M0R381 172 aa13.79□□□□□ -0.2
TRAF3-203ENST00000392745 ZNF702PQ9H963 129 aa13.79□□□□□ -0.2
TRAF3-203ENST00000392745 SUMO2P61956 95 aaKnown RBP13.79□□□□□ -0.2
TRAF3-203ENST00000392745 SFTA2Q6UW10 78 aa13.79□□□□□ -0.2
TRAF3-203ENST00000392745 PRADC1Q9BSG0 188 aa13.79□□□□□ -0.2
TRAF3-203ENST00000392745 APOMO95445 188 aa13.78□□□□□ -0.2
TRAF3-203ENST00000392745 ORMDL2Q53FV1 153 aa13.78□□□□□ -0.2
TRAF3-203ENST00000392745 UNC79Q9P2D8 2635 aa13.78□□□□□ -0.2
TRAF3-203ENST00000392745 A0A1B0GV72 72 aa13.78□□□□□ -0.2
TRAF3-203ENST00000392745 SMCPP49901 116 aaPredicted RBP13.78□□□□□ -0.2
TRAF3-203ENST00000392745 GLMPQ8WWB7 406 aa13.78□□□□□ -0.2
TRAF3-203ENST00000392745 BAALCQ8WXS3 180 aa13.78□□□□□ -0.2
TRAF3-203ENST00000392745 PLEKHB2Q96CS7 222 aa13.78□□□□□ -0.2
TRAF3-203ENST00000392745 MRPL16Q9NX20 251 aaKnown RBP13.78□□□□□ -0.2
TRAF3-203ENST00000392745 SCGB2A2Q13296 93 aa13.77□□□□□ -0.21
TRAF3-203ENST00000392745 C14orf178Q8N769 122 aaPredicted RBP13.76□□□□□ -0.21
TRAF3-203ENST00000392745 ACANP16112 2415 aa13.76□□□□□ -0.21
TRAF3-203ENST00000392745 CUBNO60494 3623 aa13.76□□□□□ -0.21
TRAF3-203ENST00000392745 LINC01549A6NIU2 74 aa13.76□□□□□ -0.21
TRAF3-203ENST00000392745 ZNF815PA8K554 130 aa13.76□□□□□ -0.21
TRAF3-203ENST00000392745 C2orf66Q6UXQ4 117 aa13.76□□□□□ -0.21
TRAF3-203ENST00000392745 MRPL53Q96EL3 112 aaKnown RBP13.76□□□□□ -0.21
TRAF3-203ENST00000392745 C20orf173Q96LM9 149 aa13.76□□□□□ -0.21
TRAF3-203ENST00000392745 PRSS29PA6NIE9 313 aa13.75□□□□□ -0.21
TRAF3-203ENST00000392745 FOXI1Q12951 378 aa13.75□□□□□ -0.21
TRAF3-203ENST00000392745 CFAP126Q5VTH2 177 aa13.75□□□□□ -0.21
TRAF3-203ENST00000392745 C16orf92Q96LL3 132 aa13.75□□□□□ -0.21
TRAF3-203ENST00000392745 DEFB1P60022 68 aa13.74□□□□□ -0.21
TRAF3-203ENST00000392745 SCGB1D4Q6XE38 83 aa13.74□□□□□ -0.21
TRAF3-203ENST00000392745 KLHL30-AS1Q8NEE0 82 aa13.74□□□□□ -0.21
TRAF3-203ENST00000392745 ZFP2Q6ZN57 461 aa13.74□□□□□ -0.21
TRAF3-203ENST00000392745 NFE4Q86UQ8 179 aa13.74□□□□□ -0.21
TRAF3-203ENST00000392745 GPHB5Q86YW7 130 aa13.74□□□□□ -0.21
TRAF3-203ENST00000392745 TMEM89A2RUT3 159 aa13.73□□□□□ -0.21
TRAF3-203ENST00000392745 MGPP08493 103 aa13.73□□□□□ -0.21
TRAF3-203ENST00000392745 EDN2P20800 178 aa13.73□□□□□ -0.21
TRAF3-203ENST00000392745 CKS1BP61024 79 aa13.73□□□□□ -0.21
TRAF3-203ENST00000392745 SYT8Q8NBV8 401 aa13.73□□□□□ -0.21
TRAF3-203ENST00000392745 C1QTNF4Q9BXJ3 329 aa13.73□□□□□ -0.21
TRAF3-203ENST00000392745 LOC107984156A0A0G2JMH3 177 aa13.73□□□□□ -0.21
TRAF3-203ENST00000392745 TSPAN13O95857 204 aa13.73□□□□□ -0.21
TRAF3-203ENST00000392745 PSMB2P49721 201 aa13.73□□□□□ -0.21
TRAF3-203ENST00000392745 KRTAP1-1Q07627 177 aa13.73□□□□□ -0.21
TRAF3-203ENST00000392745 ARL17AQ8IVW1 177 aa13.73□□□□□ -0.21
TRAF3-203ENST00000392745 DEFB104AQ8WTQ1 72 aa13.73□□□□□ -0.21
TRAF3-203ENST00000392745 DLX4Q92988 240 aaPredicted RBP13.73□□□□□ -0.21
TRAF3-203ENST00000392745 SRSF9Q13242 221 aaKnown RBP eCLIP13.72□□□□□ -0.21
TRAF3-203ENST00000392745 DPH3P1Q9H4G8 78 aa13.72□□□□□ -0.21
TRAF3-203ENST00000392745 S100A4P26447 101 aaKnown RBP13.72□□□□□ -0.21
TRAF3-203ENST00000392745 UBE2D1P51668 147 aa13.72□□□□□ -0.21
TRAF3-203ENST00000392745 WFDC12Q8WWY7 111 aa13.72□□□□□ -0.21
TRAF3-203ENST00000392745 PTH2Q96A98 100 aa13.72□□□□□ -0.21
TRAF3-203ENST00000392745 CDIP1Q9H305 208 aa13.72□□□□□ -0.21
TRAF3-203ENST00000392745 FHL3Q13643 280 aa13.71□□□□□ -0.21
TRAF3-203ENST00000392745 ZFAND2AQ8N6M9 145 aa13.71□□□□□ -0.21
TRAF3-203ENST00000392745 CLUHP3Q96NS8 147 aa13.71□□□□□ -0.21
TRAF3-203ENST00000392745 MYO9AB2RTY4 2548 aa13.71□□□□□ -0.21
TRAF3-203ENST00000392745 CRYGDP07320 174 aa13.71□□□□□ -0.21
TRAF3-203ENST00000392745 EMP1P54849 157 aa13.71□□□□□ -0.21
TRAF3-203ENST00000392745 ZNF418Q8TF45 676 aaPredicted RBP13.71□□□□□ -0.21
TRAF3-203ENST00000392745 RHPN1-AS1Q9BWJ2 59 aa13.71□□□□□ -0.21
TRAF3-203ENST00000392745 DAZ1Q9NQZ3 744 aaKnown RBP13.71□□□□□ -0.21
TRAF3-203ENST00000392745 PHLDA3Q9Y5J5 127 aa13.71□□□□□ -0.21
TRAF3-203ENST00000392745 DUSP14O95147 198 aaKnown RBP13.7□□□□□ -0.22
TRAF3-203ENST00000392745 TMEM238LA0A1B0GVL6 79 aa13.7□□□□□ -0.22
TRAF3-203ENST00000392745 A6NJY4 79 aa13.7□□□□□ -0.22
TRAF3-203ENST00000392745 ANXA2RQ3ZCQ2 193 aa13.7□□□□□ -0.22
TRAF3-203ENST00000392745 Q8N2B8 174 aa13.7□□□□□ -0.22
TRAF3-203ENST00000392745 FASNP49327 2511 aaKnown RBP13.7□□□□□ -0.22
TRAF3-203ENST00000392745 ELANEP08246 267 aa13.69□□□□□ -0.22
TRAF3-203ENST00000392745 TCTEX1D4Q5JR98 221 aa13.69□□□□□ -0.22
TRAF3-203ENST00000392745 NF1P21359 2839 aa13.69□□□□□ -0.22
TRAF3-203ENST00000392745 CD7P09564 240 aa13.69□□□□□ -0.22
TRAF3-203ENST00000392745 C11orf86A6NJI1 115 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms