RNA–Protein interactions for RNA: ENST00000390495.1

TRAJ42-201, Transcript of T cell receptor alpha joining 42, humanhuman

APPRIS P1 BASIC

Gene TRAJ42, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ42-201ENST00000390495 SMG6Q86US8 1419 aaKnown RBP-5.89□□□□□ -3.35
TRAJ42-201ENST00000390495 KIF1BO60333 1816 aa-5.89□□□□□ -3.35
TRAJ42-201ENST00000390495 A0A1B0GW15 77 aa-5.89□□□□□ -3.35
TRAJ42-201ENST00000390495 EVPLLA8MZ36 301 aa-5.89□□□□□ -3.35
TRAJ42-201ENST00000390495 AKAP14Q86UN6 197 aa-5.89□□□□□ -3.35
TRAJ42-201ENST00000390495 STX19Q8N4C7 294 aa-5.89□□□□□ -3.35
TRAJ42-201ENST00000390495 COX16Q9P0S2 106 aa-5.89□□□□□ -3.35
TRAJ42-201ENST00000390495 TRAPPC8Q9Y2L5 1435 aa-5.9□□□□□ -3.35
TRAJ42-201ENST00000390495 LINC00959A0A1B0GUT2 108 aa-5.9□□□□□ -3.35
TRAJ42-201ENST00000390495 C5orf58C9J3I9 102 aa-5.9□□□□□ -3.35
TRAJ42-201ENST00000390495 ARPC5O15511 151 aa-5.9□□□□□ -3.35
TRAJ42-201ENST00000390495 CST8O60676 142 aa-5.9□□□□□ -3.35
TRAJ42-201ENST00000390495 CXCL1P09341 107 aa-5.9□□□□□ -3.35
TRAJ42-201ENST00000390495 MLLT11Q13015 90 aaPredicted RBP-5.9□□□□□ -3.35
TRAJ42-201ENST00000390495 Q3ZCU0 254 aa-5.9□□□□□ -3.35
TRAJ42-201ENST00000390495 C1orf195Q5TG92 126 aa-5.9□□□□□ -3.35
TRAJ42-201ENST00000390495 NUP210LQ5VU65 1888 aa-5.91□□□□□ -3.36
TRAJ42-201ENST00000390495 hCG_1818297A0A087WSY0 165 aa-5.91□□□□□ -3.36
TRAJ42-201ENST00000390495 A0A087WUJ7 227 aa-5.91□□□□□ -3.36
TRAJ42-201ENST00000390495 C8orf88P0DMB2 117 aa-5.91□□□□□ -3.36
TRAJ42-201ENST00000390495 ERP29P30040 261 aaKnown RBP-5.91□□□□□ -3.36
TRAJ42-201ENST00000390495 S100A5P33763 92 aa-5.91□□□□□ -3.36
TRAJ42-201ENST00000390495 VAMP3Q15836 100 aa-5.91□□□□□ -3.36
TRAJ42-201ENST00000390495 LINC00523Q86TU6 105 aa-5.91□□□□□ -3.36
TRAJ42-201ENST00000390495 CCDC77Q9BR77 488 aa-5.91□□□□□ -3.36
TRAJ42-201ENST00000390495 NDUFA12Q9UI09 145 aa-5.91□□□□□ -3.36
TRAJ42-201ENST00000390495 CMPK1P30085 196 aa-5.92□□□□□ -3.36
TRAJ42-201ENST00000390495 KDELR2P33947 212 aa-5.92□□□□□ -3.36
TRAJ42-201ENST00000390495 NAA20P61599 178 aa-5.92□□□□□ -3.36
TRAJ42-201ENST00000390495 LELP1Q5T871 98 aa-5.92□□□□□ -3.36
TRAJ42-201ENST00000390495 HEPN1Q6WQI6 88 aa-5.92□□□□□ -3.36
TRAJ42-201ENST00000390495 RAB8BQ92930 207 aa-5.92□□□□□ -3.36
TRAJ42-201ENST00000390495 SPRR4Q96PI1 79 aa-5.92□□□□□ -3.36
TRAJ42-201ENST00000390495 NDUFA4L2Q9NRX3 87 aa-5.92□□□□□ -3.36
TRAJ42-201ENST00000390495 ARHGEF12Q9NZN5 1544 aa-5.93□□□□□ -3.36
TRAJ42-201ENST00000390495 GOLGA8KD6RF30 607 aa-5.93□□□□□ -3.36
TRAJ42-201ENST00000390495 MT-ND6P03923 174 aa-5.93□□□□□ -3.36
TRAJ42-201ENST00000390495 CYBAP13498 195 aa-5.93□□□□□ -3.36
TRAJ42-201ENST00000390495 OR51D1Q8NGF3 324 aa-5.93□□□□□ -3.36
TRAJ42-201ENST00000390495 DRC3Q9H069 523 aa-5.93□□□□□ -3.36
TRAJ42-201ENST00000390495 CDC42BPAQ5VT25 1732 aa-5.94□□□□□ -3.36
TRAJ42-201ENST00000390495 NCAPD3P42695 1498 aa-5.94□□□□□ -3.36
TRAJ42-201ENST00000390495 A0A1W2PPV4 95 aa-5.94□□□□□ -3.36
TRAJ42-201ENST00000390495 IFNA6P05013 189 aa-5.94□□□□□ -3.36
TRAJ42-201ENST00000390495 MYL6P60660 151 aa-5.94□□□□□ -3.36
TRAJ42-201ENST00000390495 SPCS2Q15005 226 aa-5.94□□□□□ -3.36
TRAJ42-201ENST00000390495 IFT20Q8IY31 132 aa-5.94□□□□□ -3.36
TRAJ42-201ENST00000390495 PPP1R2P1Q96PQ5 205 aa-5.94□□□□□ -3.36
TRAJ42-201ENST00000390495 WRNQ14191 1432 aaPredicted RBP eCLIP-5.94□□□□□ -3.36
TRAJ42-201ENST00000390495 NKTRP30414 1462 aaKnown RBP-5.95□□□□□ -3.36
TRAJ42-201ENST00000390495 H7BZZ5 65 aa-5.95□□□□□ -3.36
TRAJ42-201ENST00000390495 CLDN8P56748 225 aa-5.95□□□□□ -3.36
TRAJ42-201ENST00000390495 PSME3P61289 254 aa-5.95□□□□□ -3.36
TRAJ42-201ENST00000390495 AKR1C8PQ5T2L2 129 aa-5.95□□□□□ -3.36
TRAJ42-201ENST00000390495 TMEM170BQ5T4T1 132 aa-5.95□□□□□ -3.36
TRAJ42-201ENST00000390495 SFXN4Q6P4A7 337 aa-5.95□□□□□ -3.36
TRAJ42-201ENST00000390495 NUP210Q8TEM1 1887 aaPredicted RBP-5.95□□□□□ -3.36
TRAJ42-201ENST00000390495 PKIGQ9Y2B9 76 aa-5.95□□□□□ -3.36
TRAJ42-201ENST00000390495 ZNF236Q9UL36 1845 aa-5.95□□□□□ -3.36
TRAJ42-201ENST00000390495 RTL9Q8NET4 1388 aa-5.95□□□□□ -3.36
TRAJ42-201ENST00000390495 TRAV30A0A087WSZ9 112 aa-5.96□□□□□ -3.36
TRAJ42-201ENST00000390495 CASQ2O14958 399 aaPredicted RBP-5.96□□□□□ -3.36
TRAJ42-201ENST00000390495 NEFHP12036 1026 aa-5.96□□□□□ -3.36
TRAJ42-201ENST00000390495 MYL12AP19105 171 aa-5.96□□□□□ -3.36
TRAJ42-201ENST00000390495 KRTAP8-1Q8IUC2 63 aa-5.96□□□□□ -3.36
TRAJ42-201ENST00000390495 CDKN2A-AS1Q9UH64 79 aa-5.96□□□□□ -3.36
TRAJ42-201ENST00000390495 FTCDNL1E5RQL4 147 aa-5.97□□□□□ -3.37
TRAJ42-201ENST00000390495 C8GP07360 202 aa-5.97□□□□□ -3.37
TRAJ42-201ENST00000390495 RPL12P30050 165 aaKnown RBP-5.97□□□□□ -3.37
TRAJ42-201ENST00000390495 ZNHIT3Q15649 155 aaPredicted RBP-5.97□□□□□ -3.37
TRAJ42-201ENST00000390495 SERPINB11Q96P15 392 aa-5.97□□□□□ -3.37
TRAJ42-201ENST00000390495 MRPL34Q9BQ48 92 aaKnown RBP-5.97□□□□□ -3.37
TRAJ42-201ENST00000390495 NDUFAF1Q9Y375 327 aa-5.97□□□□□ -3.37
TRAJ42-201ENST00000390495 ADGRL3Q9HAR2 1447 aa-5.98□□□□□ -3.37
TRAJ42-201ENST00000390495 MARF1Q9Y4F3 1742 aaKnown RBP-5.98□□□□□ -3.37
TRAJ42-201ENST00000390495 TRAV12-3A0A0B4J271 114 aa-5.98□□□□□ -3.37
TRAJ42-201ENST00000390495 SYT1P21579 422 aa-5.98□□□□□ -3.37
TRAJ42-201ENST00000390495 NFYBP25208 207 aa-5.98□□□□□ -3.37
TRAJ42-201ENST00000390495 ATP11AUNQ6ZP68 121 aa-5.98□□□□□ -3.37
TRAJ42-201ENST00000390495 MCEEQ96PE7 176 aa-5.98□□□□□ -3.37
TRAJ42-201ENST00000390495 CRIPTQ9P021 101 aa-5.98□□□□□ -3.37
TRAJ42-201ENST00000390495 LAMTOR3Q9UHA4 124 aa-5.98□□□□□ -3.37
TRAJ42-201ENST00000390495 PIK3C2AO00443 1686 aa-5.98□□□□□ -3.37
TRAJ42-201ENST00000390495 ALKQ9UM73 1620 aa-5.99□□□□□ -3.37
TRAJ42-201ENST00000390495 M0R135 149 aa-5.99□□□□□ -3.37
TRAJ42-201ENST00000390495 SLC25A6P12236 298 aa-5.99□□□□□ -3.37
TRAJ42-201ENST00000390495 SLAMF1Q13291 335 aa-5.99□□□□□ -3.37
TRAJ42-201ENST00000390495 STK38Q15208 465 aa-5.99□□□□□ -3.37
TRAJ42-201ENST00000390495 C9orf116Q5BN46 136 aaPredicted RBP-5.99□□□□□ -3.37
TRAJ42-201ENST00000390495 CLVS2Q5SYC1 327 aa-5.99□□□□□ -3.37
TRAJ42-201ENST00000390495 AP3S1Q92572 193 aa-5.99□□□□□ -3.37
TRAJ42-201ENST00000390495 MRM2Q9UI43 246 aaKnown RBP-5.99□□□□□ -3.37
TRAJ42-201ENST00000390495 PTPRMP28827 1452 aa-6□□□□□ -3.37
TRAJ42-201ENST00000390495 CTXND1A0A1B0GTU2 59 aa-6□□□□□ -3.37
TRAJ42-201ENST00000390495 MT1FP04733 61 aa-6□□□□□ -3.37
TRAJ42-201ENST00000390495 TPT1P13693 172 aaKnown RBP-6□□□□□ -3.37
TRAJ42-201ENST00000390495 MED21Q13503 144 aa-6□□□□□ -3.37
TRAJ42-201ENST00000390495 MSMO1Q15800 293 aa-6□□□□□ -3.37
TRAJ42-201ENST00000390495 FKBP11Q9NYL4 201 aa-6□□□□□ -3.37
TRAJ42-201ENST00000390495 ERG28Q9UKR5 140 aa-6□□□□□ -3.37
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms