RNA–Protein interactions for RNA: ENST00000390399.3

TRBV27-201, Transcript of T cell receptor beta variable 27, humanhuman

APPRIS P1 BASIC

Gene TRBV27, Length 387 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27-201ENST00000390399 NFE4Q86UQ8 179 aa6.08□□□□□ -1.44
TRBV27-201ENST00000390399 C14orf178Q8N769 122 aaPredicted RBP6.08□□□□□ -1.44
TRBV27-201ENST00000390399 DYNC1H1Q14204 4646 aaKnown RBP6.08□□□□□ -1.44
TRBV27-201ENST00000390399 CRYGDP07320 174 aa6.07□□□□□ -1.44
TRBV27-201ENST00000390399 LINC00694P0DN24 101 aa6.07□□□□□ -1.44
TRBV27-201ENST00000390399 TAGLN2P37802 199 aaKnown RBP6.07□□□□□ -1.44
TRBV27-201ENST00000390399 GNG4P50150 75 aa6.07□□□□□ -1.44
TRBV27-201ENST00000390399 LELP1Q5T871 98 aa6.07□□□□□ -1.44
TRBV27-201ENST00000390399 ALKAL2Q6UX46 152 aa6.07□□□□□ -1.44
TRBV27-201ENST00000390399 SPATA12Q7Z6I5 190 aa6.07□□□□□ -1.44
TRBV27-201ENST00000390399 C10orf126Q8N4M7 172 aa6.07□□□□□ -1.44
TRBV27-201ENST00000390399 OR10AG1Q8NH19 301 aa6.07□□□□□ -1.44
TRBV27-201ENST00000390399 GTSF1LQ9H1H1 148 aa6.07□□□□□ -1.44
TRBV27-201ENST00000390399 MED9Q9NWA0 146 aa6.07□□□□□ -1.44
TRBV27-201ENST00000390399 MSRB1Q9NZV6 116 aa6.07□□□□□ -1.44
TRBV27-201ENST00000390399 VAX2Q9UIW0 290 aa6.07□□□□□ -1.44
TRBV27-201ENST00000390399 BOLA1Q9Y3E2 137 aa6.07□□□□□ -1.44
TRBV27-201ENST00000390399 TNFRSF18Q9Y5U5 241 aa6.07□□□□□ -1.44
TRBV27-201ENST00000390399 RAB19A4D1S5 217 aa6.06□□□□□ -1.44
TRBV27-201ENST00000390399 SNAI2O43623 268 aa6.06□□□□□ -1.44
TRBV27-201ENST00000390399 LINC01556Q5JQF7 62 aa6.06□□□□□ -1.44
TRBV27-201ENST00000390399 SPANXN1Q5VSR9 72 aa6.06□□□□□ -1.44
TRBV27-201ENST00000390399 DAZAP1Q96EP5 407 aaKnown RBP6.06□□□□□ -1.44
TRBV27-201ENST00000390399 SMIM12Q96EX1 92 aa6.06□□□□□ -1.44
TRBV27-201ENST00000390399 DNAH11Q96DT5 4516 aa6.06□□□□□ -1.44
TRBV27-201ENST00000390399 MUC21A0A0G2JKD1 596 aa6.05□□□□□ -1.44
TRBV27-201ENST00000390399 MUC21A0A140T8X8 626 aa6.05□□□□□ -1.44
TRBV27-201ENST00000390399 A0A1B0GVG6 124 aa6.05□□□□□ -1.44
TRBV27-201ENST00000390399 IGLV2-8P01709 118 aa6.05□□□□□ -1.44
TRBV27-201ENST00000390399 IGHV3-30P01768 117 aa6.05□□□□□ -1.44
TRBV27-201ENST00000390399 IGHV3-33P01772 117 aa6.05□□□□□ -1.44
TRBV27-201ENST00000390399 OR5AL1P0C617 328 aa6.05□□□□□ -1.44
TRBV27-201ENST00000390399 IGHV3-30-3P0DP02 117 aa6.05□□□□□ -1.44
TRBV27-201ENST00000390399 IGHV3-30-5P0DP03 117 aa6.05□□□□□ -1.44
TRBV27-201ENST00000390399 NKX2-5P52952 324 aaPredicted RBP6.05□□□□□ -1.44
TRBV27-201ENST00000390399 ERVFC1-1P60608 527 aa6.05□□□□□ -1.44
TRBV27-201ENST00000390399 RPS20P60866 119 aaKnown RBP6.05□□□□□ -1.44
TRBV27-201ENST00000390399 BLOC1S1P78537 153 aa6.05□□□□□ -1.44
TRBV27-201ENST00000390399 ZNF56Q15929 161 aa6.05□□□□□ -1.44
TRBV27-201ENST00000390399 SSBP4Q9BWG4 385 aaPredicted RBP6.05□□□□□ -1.44
TRBV27-201ENST00000390399 Q9UF83 564 aa6.05□□□□□ -1.44
TRBV27-201ENST00000390399 RYR1P21817 5038 aa6.05□□□□□ -1.44
TRBV27-201ENST00000390399 TRBV20OR9-2A0A075B6H5 130 aa6.04□□□□□ -1.44
TRBV27-201ENST00000390399 A0A087WWC5 75 aa6.04□□□□□ -1.44
TRBV27-201ENST00000390399 TRBV10-1A0A0K0K1A3 114 aa6.04□□□□□ -1.44
TRBV27-201ENST00000390399 C19orf71A6NCJ1 209 aa6.04□□□□□ -1.44
TRBV27-201ENST00000390399 EREGO14944 169 aa6.04□□□□□ -1.44
TRBV27-201ENST00000390399 P01737 135 aa6.04□□□□□ -1.44
TRBV27-201ENST00000390399 GZMBP10144 247 aa6.04□□□□□ -1.44
TRBV27-201ENST00000390399 KRTAP10-2P60368 255 aa6.04□□□□□ -1.44
TRBV27-201ENST00000390399 SSTP61278 116 aa6.04□□□□□ -1.44
TRBV27-201ENST00000390399 RPL36AP83881 106 aaKnown RBP6.04□□□□□ -1.44
TRBV27-201ENST00000390399 OR2D3Q8NGH3 330 aa6.04□□□□□ -1.44
TRBV27-201ENST00000390399 RPL36ALQ969Q0 106 aaKnown RBP6.04□□□□□ -1.44
TRBV27-201ENST00000390399 TPPP3Q9BW30 176 aa6.04□□□□□ -1.44
TRBV27-201ENST00000390399 BIN3Q9NQY0 253 aa6.04□□□□□ -1.44
TRBV27-201ENST00000390399 XKRY2A2RUG3 117 aa6.03□□□□□ -1.44
TRBV27-201ENST00000390399 IBA57-AS1B1ANH7 110 aa6.03□□□□□ -1.44
TRBV27-201ENST00000390399 SMIM17P0DL12 118 aa6.03□□□□□ -1.44
TRBV27-201ENST00000390399 RAB4BP61018 213 aa6.03□□□□□ -1.44
TRBV27-201ENST00000390399 FER1L6-AS1Q8NA97 138 aa6.03□□□□□ -1.44
TRBV27-201ENST00000390399 AP1S3Q96PC3 154 aa6.03□□□□□ -1.44
TRBV27-201ENST00000390399 PCLOQ9Y6V0 5065 aa6.03□□□□□ -1.44
TRBV27-201ENST00000390399 A0A087WTM6 91 aa6.02□□□□□ -1.45
TRBV27-201ENST00000390399 RBFOX3A6NFN3 312 aa6.02□□□□□ -1.45
TRBV27-201ENST00000390399 F5H697 171 aa6.02□□□□□ -1.45
TRBV27-201ENST00000390399 PSCAO43653 123 aa6.02□□□□□ -1.45
TRBV27-201ENST00000390399 IGLC6P0CF74 106 aa6.02□□□□□ -1.45
TRBV27-201ENST00000390399 UBE2D3P61077 147 aa6.02□□□□□ -1.45
TRBV27-201ENST00000390399 UBE2D2P62837 147 aa6.02□□□□□ -1.45
TRBV27-201ENST00000390399 Q8N3U1 123 aa6.02□□□□□ -1.45
TRBV27-201ENST00000390399 Q9HAA7 133 aa6.02□□□□□ -1.45
TRBV27-201ENST00000390399 TRBV7-3A0A075B6L6 115 aa6.01□□□□□ -1.45
TRBV27-201ENST00000390399 TMEM250H0YL14 139 aa6.01□□□□□ -1.45
TRBV27-201ENST00000390399 MGPP08493 103 aa6.01□□□□□ -1.45
TRBV27-201ENST00000390399 CACNG7P62955 275 aa6.01□□□□□ -1.45
TRBV27-201ENST00000390399 LAGE3Q14657 143 aa6.01□□□□□ -1.45
TRBV27-201ENST00000390399 TOR2AQ5JU69 321 aa6.01□□□□□ -1.45
TRBV27-201ENST00000390399 NEXN-AS1Q8NBZ9 246 aa6.01□□□□□ -1.45
TRBV27-201ENST00000390399 OR10G8Q8NGN5 311 aa6.01□□□□□ -1.45
TRBV27-201ENST00000390399 LYPD6BQ8NI32 183 aa6.01□□□□□ -1.45
TRBV27-201ENST00000390399 KIF25-AS1Q9Y6Z4 181 aa6.01□□□□□ -1.45
TRBV27-201ENST00000390399 URGCP-MRPS24S4R325 110 aa6.01□□□□□ -1.45
TRBV27-201ENST00000390399 F2Z2F3 143 aa6□□□□□ -1.45
TRBV27-201ENST00000390399 K7EN84 100 aa6□□□□□ -1.45
TRBV27-201ENST00000390399 CDK2AP2O75956 126 aa6□□□□□ -1.45
TRBV27-201ENST00000390399 CEBPGP53567 150 aa6□□□□□ -1.45
TRBV27-201ENST00000390399 CDPF1Q6NVV7 123 aa6□□□□□ -1.45
TRBV27-201ENST00000390399 LYZL1Q6UWQ5 148 aa6□□□□□ -1.45
TRBV27-201ENST00000390399 DAZ4Q86SG3 579 aaKnown RBP6□□□□□ -1.45
TRBV27-201ENST00000390399 SREK1IP1Q8N9Q2 155 aaPredicted RBP6□□□□□ -1.45
TRBV27-201ENST00000390399 NUDT10Q8NFP7 164 aa6□□□□□ -1.45
TRBV27-201ENST00000390399 OCC1Q8TAD7 63 aa6□□□□□ -1.45
TRBV27-201ENST00000390399 NUDT11Q96G61 164 aa6□□□□□ -1.45
TRBV27-201ENST00000390399 RNASE7Q9H1E1 156 aaKnown RBP6□□□□□ -1.45
TRBV27-201ENST00000390399 RPP21Q9H633 154 aaKnown RBP6□□□□□ -1.45
TRBV27-201ENST00000390399 DAZ3Q9NR90 486 aaKnown RBP6□□□□□ -1.45
TRBV27-201ENST00000390399 PGPEP1Q9NXJ5 209 aa6□□□□□ -1.45
TRBV27-201ENST00000390399 TRGC1P0CF51 173 aa5.99□□□□□ -1.45
TRBV27-201ENST00000390399 FUSP35637 526 aaKnown RBP eCLIP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms