RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 G3V4G9 280 aa12□□□□□ -0.49
ALK-201ENST00000389048 HIST2H2BDQ6DRA6 164 aa12□□□□□ -0.49
ALK-201ENST00000389048 Q8NFD4 153 aa12□□□□□ -0.49
ALK-201ENST00000389048 SPART-AS1P0CW21 52 aa12□□□□□ -0.49
ALK-201ENST00000389048 MIR7-3HGQ8N6C7 128 aa12□□□□□ -0.49
ALK-201ENST00000389048 CENPVL3A0A0U1RRI6 287 aa12□□□□□ -0.49
ALK-201ENST00000389048 C11orf53Q8IXP5 236 aa12□□□□□ -0.49
ALK-201ENST00000389048 FGF23Q9GZV9 251 aaPredicted RBP12□□□□□ -0.49
ALK-201ENST00000389048 C4orf48Q5BLP8 95 aa11.99□□□□□ -0.49
ALK-201ENST00000389048 C9orf66Q5T8R8 295 aa11.99□□□□□ -0.49
ALK-201ENST00000389048 NFE4Q86UQ8 179 aa11.99□□□□□ -0.49
ALK-201ENST00000389048 I3L2K1 104 aa11.99□□□□□ -0.49
ALK-201ENST00000389048 PATE2Q6UY27 113 aa11.99□□□□□ -0.49
ALK-201ENST00000389048 FRMPD3Q5JV73 1810 aa11.99□□□□□ -0.49
ALK-201ENST00000389048 DAZ2Q13117 558 aaKnown RBP11.99□□□□□ -0.49
ALK-201ENST00000389048 DAZ4Q86SG3 579 aaKnown RBP11.99□□□□□ -0.49
ALK-201ENST00000389048 DAZ3Q9NR90 486 aaKnown RBP11.99□□□□□ -0.49
ALK-201ENST00000389048 RNF138Q8WVD3 245 aa11.99□□□□□ -0.49
ALK-201ENST00000389048 NACAE9PAV3 2078 aa11.99□□□□□ -0.49
ALK-201ENST00000389048 SEC61GP60059 68 aa11.98□□□□□ -0.49
ALK-201ENST00000389048 TEN1Q86WV5 123 aa11.98□□□□□ -0.49
ALK-201ENST00000389048 EML6Q6ZMW3 1958 aa11.98□□□□□ -0.49
ALK-201ENST00000389048 VWA8A3KMH1 1905 aa11.98□□□□□ -0.49
ALK-201ENST00000389048 PLA2G2EQ9NZK7 142 aa11.97□□□□□ -0.49
ALK-201ENST00000389048 SBF1O95248 1867 aa11.97□□□□□ -0.49
ALK-201ENST00000389048 K7EIM0 57 aa11.97□□□□□ -0.49
ALK-201ENST00000389048 NDUFA1O15239 70 aa11.97□□□□□ -0.49
ALK-201ENST00000389048 TRBV12-3P01733 135 aa11.97□□□□□ -0.49
ALK-201ENST00000389048 MDFICQ9P1T7 246 aa11.97□□□□□ -0.49
ALK-201ENST00000389048 SPTBN1Q01082 2364 aaKnown RBP11.96□□□□□ -0.49
ALK-201ENST00000389048 TOMM6Q96B49 74 aa11.96□□□□□ -0.49
ALK-201ENST00000389048 SLPIP03973 132 aa11.96□□□□□ -0.5
ALK-201ENST00000389048 SPAG11BQ08648 103 aa11.96□□□□□ -0.5
ALK-201ENST00000389048 LINC01545Q5VT33 79 aa11.96□□□□□ -0.5
ALK-201ENST00000389048 DIRC1Q969H9 104 aa11.96□□□□□ -0.5
ALK-201ENST00000389048 TRBV7-3A0A075B6L6 115 aa11.96□□□□□ -0.5
ALK-201ENST00000389048 C11orf86A6NJI1 115 aa11.96□□□□□ -0.5
ALK-201ENST00000389048 RLFQ13129 1914 aa11.95□□□□□ -0.5
ALK-201ENST00000389048 TP53TG3Q9ULZ0 132 aa11.95□□□□□ -0.5
ALK-201ENST00000389048 H0YGX0 51 aa11.95□□□□□ -0.5
ALK-201ENST00000389048 CTSGP08311 255 aa11.95□□□□□ -0.5
ALK-201ENST00000389048 SDIM1Q6ZPB5 146 aa11.95□□□□□ -0.5
ALK-201ENST00000389048 TP73-AS1Q9UF72 201 aa11.95□□□□□ -0.5
ALK-201ENST00000389048 COL6A6A6NMZ7 2263 aa11.95□□□□□ -0.5
ALK-201ENST00000389048 C16orf54Q6UWD8 224 aa11.95□□□□□ -0.5
ALK-201ENST00000389048 SLX1AQ9BQ83 275 aa11.95□□□□□ -0.5
ALK-201ENST00000389048 SIRPDQ9H106 197 aa11.95□□□□□ -0.5
ALK-201ENST00000389048 WT1P19544 449 aaPredicted RBP11.94□□□□□ -0.5
ALK-201ENST00000389048 UPK3BQ9BT76 320 aa11.94□□□□□ -0.5
ALK-201ENST00000389048 E7EUB6 86 aa11.94□□□□□ -0.5
ALK-201ENST00000389048 H3BUA1 57 aa11.94□□□□□ -0.5
ALK-201ENST00000389048 MT-ATP8P03928 68 aa11.94□□□□□ -0.5
ALK-201ENST00000389048 SPANXCQ9NY87 97 aa11.94□□□□□ -0.5
ALK-201ENST00000389048 SPTA1P02549 2419 aa11.93□□□□□ -0.5
ALK-201ENST00000389048 DEFB113Q30KQ7 82 aa11.93□□□□□ -0.5
ALK-201ENST00000389048 NCKAP5O14513 1909 aa11.93□□□□□ -0.5
ALK-201ENST00000389048 LTBP1Q14766 1721 aa11.93□□□□□ -0.5
ALK-201ENST00000389048 POU2AF1Q16633 256 aa11.93□□□□□ -0.5
ALK-201ENST00000389048 TRBV10-2A0A0K0K1G8 114 aa11.92□□□□□ -0.5
ALK-201ENST00000389048 IGFL3Q6UXB1 125 aa11.92□□□□□ -0.5
ALK-201ENST00000389048 IGLV11-55A0A075B6I3 123 aa11.92□□□□□ -0.5
ALK-201ENST00000389048 C2orf70A6NJV1 201 aa11.92□□□□□ -0.5
ALK-201ENST00000389048 NDUFV3P56181 108 aaKnown RBP11.92□□□□□ -0.5
ALK-201ENST00000389048 LOXL1Q08397 574 aaPredicted RBP11.92□□□□□ -0.5
ALK-201ENST00000389048 Q6ZUT4 128 aa11.92□□□□□ -0.5
ALK-201ENST00000389048 C5orf56Q8N8D9 126 aa11.92□□□□□ -0.5
ALK-201ENST00000389048 TCL1BO95988 128 aa11.91□□□□□ -0.5
ALK-201ENST00000389048 USF3Q68DE3 2245 aa11.91□□□□□ -0.5
ALK-201ENST00000389048 GTF3C1Q12789 2109 aa11.91□□□□□ -0.5
ALK-201ENST00000389048 ZFP36P26651 326 aaKnown RBP11.91□□□□□ -0.5
ALK-201ENST00000389048 HIGD2AQ9BW72 106 aa11.91□□□□□ -0.5
ALK-201ENST00000389048 WFDC10BQ8IUB3 73 aa11.91□□□□□ -0.5
ALK-201ENST00000389048 TMEM263Q8WUH6 116 aaKnown RBP11.91□□□□□ -0.5
ALK-201ENST00000389048 IGKV1-17P01599 117 aa11.9□□□□□ -0.5
ALK-201ENST00000389048 PLXNA3P51805 1871 aa11.9□□□□□ -0.5
ALK-201ENST00000389048 UNQ9165/PRO28630Q6UXU0 137 aa11.9□□□□□ -0.5
ALK-201ENST00000389048 CASC2Q6XLA1 102 aa11.9□□□□□ -0.5
ALK-201ENST00000389048 KIAA1671Q9BY89 1806 aa11.9□□□□□ -0.5
ALK-201ENST00000389048 FNDC1Q4ZHG4 1894 aaPredicted RBP11.9□□□□□ -0.5
ALK-201ENST00000389048 Q8N9W7 124 aa11.9□□□□□ -0.51
ALK-201ENST00000389048 KAAG1Q9UBP8 84 aa11.89□□□□□ -0.51
ALK-201ENST00000389048 MRPL55Q7Z7F7 128 aaKnown RBP11.89□□□□□ -0.51
ALK-201ENST00000389048 IGLV3-1P01715 115 aa11.89□□□□□ -0.51
ALK-201ENST00000389048 HRCT1Q6UXD1 115 aa11.89□□□□□ -0.51
ALK-201ENST00000389048 DCANP1Q8TF63 244 aa11.89□□□□□ -0.51
ALK-201ENST00000389048 ABCA4P78363 2273 aa11.89□□□□□ -0.51
ALK-201ENST00000389048 LYPD6BQ8NI32 183 aa11.89□□□□□ -0.51
ALK-201ENST00000389048 ARHGAP21Q5T5U3 1957 aa11.88□□□□□ -0.51
ALK-201ENST00000389048 TEX22C9J3V5 150 aa11.88□□□□□ -0.51
ALK-201ENST00000389048 ZNF407Q9C0G0 2248 aa11.88□□□□□ -0.51
ALK-201ENST00000389048 E9PLD3 99 aa11.88□□□□□ -0.51
ALK-201ENST00000389048 COX7BP24311 80 aa11.88□□□□□ -0.51
ALK-201ENST00000389048 TNRC6AQ8NDV7 1962 aaKnown RBP11.88□□□□□ -0.51
ALK-201ENST00000389048 TEX49A0A1B0GTD5 131 aa11.88□□□□□ -0.51
ALK-201ENST00000389048 IL15RAQ13261 267 aa11.87□□□□□ -0.51
ALK-201ENST00000389048 C20orf197Q8N268 126 aa11.87□□□□□ -0.51
ALK-201ENST00000389048 LINC00269Q8N2A0 174 aa11.87□□□□□ -0.51
ALK-201ENST00000389048 ABCA1O95477 2261 aa11.87□□□□□ -0.51
ALK-201ENST00000389048 RNF152Q8N8N0 203 aa11.87□□□□□ -0.51
ALK-201ENST00000389048 SPATA12Q7Z6I5 190 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms